Lysobacter auxotrophicus: LA521A_13030
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Entry
LA521A_13030 CDS
T09075
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
laux
Lysobacter auxotrophicus
Pathway
laux03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LA521A_13030 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laux03019
]
LA521A_13030 (pcnB)
Enzymes [BR:
laux01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LA521A_13030 (pcnB)
Messenger RNA biogenesis [BR:
laux03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LA521A_13030 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
BDU16102
UniProt:
A0ABM8DBZ6
LinkDB
All DBs
Position
1469799..1471103
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AA seq
434 aa
AA seq
DB search
MQIIPRDQHNVSRRDISPNALRVLYRLREGGFDAYLVGGAVRDLLIGGHPKDFDVATNAT
PEEVKGLFRNCRLIGRRFRLAHVVYGREIIEVATFRANSDDGSGDRELHEGGRVLRDNVY
GTIEDDAVRRDFTANALYYAIEDFSVRDYTGGFEDVRNRLMRLIGDPETRYREDPVRMLR
AVRLAAKLDFEIESETAKPIAQLAPLLREAAPARLFEECLKLFLSGHAVKSFLGLERHGL
LPALLPETAAALKSNRSGALRRMLLEGLKGTDTRVANDEPVSPAFLFALLLWPAYCRALI
TLQAQGVHATEAQRRAADRVTVHQLETIALPRRFSLPMQEIWLLQSRFSQRQRKRVFRTL
AHPRFRAAFDFLNLRLAASDEHADDVAFWREAQTDPGHALAVQAEAHRDIESNEEGEAPR
KRRRRRRKTAHGGE
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
ttgcagatcattccgcgcgaccagcacaacgtctcgcggcgcgacatcagccccaatgcc
ctgcgcgtgctttaccgcctgcgtgaaggcggtttcgacgcgtacctggtgggcggcgcc
gtccgcgacctgctcatcggcggacacccgaaggacttcgacgtcgccaccaacgcgacg
cccgaagaggtcaagggcctgttccgcaactgccgcctgatcggtcgccgctttcgcctg
gcgcacgtggtctacggccgcgaaatcatcgaagtggcgaccttccgcgcgaacagcgac
gacggcagcggcgatcgcgaactgcacgaaggcggccgcgtgctgcgcgacaacgtgtac
ggcacgatcgaggacgacgcggtgcgtcgcgacttcaccgccaacgcgctgtactacgcg
atcgaggacttctcggtgcgcgactacaccggtggcttcgaggacgtgcgcaaccggctg
atgcgcctgatcggcgatccggaaacgcgttatcgcgaagaccccgtgcgcatgctgcgc
gcggtgcgcctggcggcgaagctcgacttcgagatcgaatcggagaccgccaagcccatt
gcgcaactggccccgctgctgcgcgaagccgcgccggcgcgcctgttcgaggaatgcctg
aagctgttcctgtcgggccacgccgtgaagagcttcctcggcctggagcgccacggcctg
ctgccggcgctgctgccggaaaccgcggccgcgctgaagtccaaccgcagcggcgcgctg
cgtcggatgctgctggaaggcctgaagggaaccgacacgcgcgtggcgaacgacgaaccg
gtgtcgccggcgttcctcttcgcgctgctgctgtggccggcgtactgccgcgcgctgatc
acgctgcaggcgcagggcgtgcatgcgaccgaagcgcagcgtcgcgcggccgatcgcgtc
accgtgcaccagctggaaacgatcgcgctgccgcgtcggttctcactgccgatgcaggaa
atctggctgctgcaatcgcgcttctcgcagcgccagcgcaagcgcgtgttccgcacgctg
gcgcatccgcgtttccgtgcggccttcgatttcctcaaccttcgactggccgcgtccgac
gagcacgccgatgacgtcgcgttctggcgcgaggcgcagaccgatccgggtcatgcgctg
gcggtgcaggccgaggcgcatcgcgacatcgagtcgaacgaagagggcgaggcgccgcgc
aagcgtcgtcgccgccgtcgcaagaccgcccacggcggcgaatga
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