Lysobacter auxotrophicus: LA521A_30480
Help
Entry
LA521A_30480 CDS
T09075
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
laux
Lysobacter auxotrophicus
Pathway
laux02020
Two-component system
laux02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
laux00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LA521A_30480 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LA521A_30480 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
laux03021
]
LA521A_30480 (rpoN)
Transcription machinery [BR:
laux03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LA521A_30480 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_3
HTH_31
HTH_Crp_2
Sigma70_r4
HTH_23
Phage_CII
Motif
Other DBs
NCBI-ProteinID:
BDU17847
UniProt:
A0ABM8DGX5
LinkDB
All DBs
Position
3400711..3402084
Genome browser
AA seq
457 aa
AA seq
DB search
MSPKLGLGVNLTPQLLQSIRLLQLTAPQLELELAQALERNPLLEQDEAEDEGVDPATDAQ
QDAAAWDELPEPSFLSGGNGGGEFDDDAAARIADGESSDPRVRLLQSLSLQWNARDVELA
AWWLDQCDDRGYLEAPLDELHLLGASSCNVDATELEIVRQRLLHGEWAGVAARDAAECLA
AQLSMQPESAARTLAARILKDHIDLLAMHDEAALAKVLRADAADVRDAVALILTLRAHPI
RDAAVSERDIVVPDVVAWRADGRWHVALNSRTAPRLRIAPHCERALADAPGDVSALRGLL
DEARWLVRGVAMRNDTLLRTTQVLVDRQRAFLERGEEAIAPLTLREVADAIGMHESTVSR
ITSGKYLQTPRGTIELKRLFAVRLEGAEVSGSAVKAMVKRLIDDEPAHAPLADDTIAGLL
ARQGVRVARRTVAKYRDQLAIAPARQRRRPVTYAKAG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgaagctcgggctgggcgtcaacctgacgccgcaactgctgcagtcgatccgc
ctgttgcagctcaccgcgccgcagctcgaactcgagctcgcccaggcgctggagcgcaac
ccgctgctcgagcaggacgaagccgaggacgagggggtcgacccggcgacggacgcgcag
caggacgccgccgcatgggacgagcttccggagccgtcgttcctttccggtggcaacggc
ggcggcgagttcgacgacgatgcggctgcgcggatcgccgacggggaatcgagcgatccg
cgcgtgcgcctgctgcagtcgctgtcgctgcagtggaacgcgcgcgacgtcgaactggcc
gcgtggtggctggaccagtgcgacgaccgcggctacctggaagccccgctcgacgagctg
cacctgctcggcgccagctcctgcaacgtcgatgccacggagctggaaatcgtccgccag
cgcctgctccacggcgaatgggcgggcgtcgccgcgcgcgatgccgccgaatgcctcgcc
gcgcagctttcgatgcagcccgaatcggccgcccgcacgctcgccgcgcgcatcctcaag
gaccacatcgacctgctcgcgatgcacgacgaagccgcgctcgcgaaggtgctgcgcgcc
gacgccgccgacgtgcgcgacgccgtggcgctgatcctcacgctgcgcgcgcatcccatc
cgcgacgccgccgtcagcgagcgcgacatcgtggtgcccgacgtcgtcgcctggcgcgcc
gatggccgctggcacgtcgcgctcaactcgcgcaccgccccgcgcctgcgcatcgcgccg
cattgcgaacgcgcgctcgccgacgcgccgggcgacgtgtccgcgctgcgcgggctgctc
gacgaagcccgctggctggtgcgcggcgtggcgatgcgcaacgacacgctgctgcgcacc
acgcaggtgctggtcgatcgccagcgcgcgttcctggaacgcggcgaggaagccatcgcg
ccgctgacgctgcgcgaggtcgccgacgccatcggcatgcacgaatccaccgtctcgcgc
atcaccagcggcaagtacctgcagacgccgcgcgggacgatcgaactcaagcgcctgttc
gccgtgcgcctggaaggcgccgaggtgtccggcagcgcggtcaaggccatggtcaagcgc
ctgatcgacgacgaaccggcgcacgcgccgctggccgacgacaccatcgccggcctgctc
gcccgccagggcgtgcgcgtggcgcgtcgcaccgtcgccaagtaccgtgaccagctggcc
atcgcgccggcgcgccagcgccgccgcccggtcacctacgccaaggccggttga
DBGET
integrated database retrieval system
