Loxodonta africana (African savanna elephant): 100653830
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Entry
100653830 CDS
T04351
Symbol
MTREX
Name
(RefSeq) superkiller viralicidic activity 2-like 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100653830 (MTREX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100653830 (MTREX)
03041 Spliceosome [BR:
lav03041
]
100653830 (MTREX)
03009 Ribosome biogenesis [BR:
lav03009
]
100653830 (MTREX)
03016 Transfer RNA biogenesis [BR:
lav03016
]
100653830 (MTREX)
Enzymes [BR:
lav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100653830 (MTREX)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
100653830 (MTREX)
Spliceosome [BR:
lav03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100653830 (MTREX)
Complex C
U4/U6.U5 tri-SnRNP related factors
100653830 (MTREX)
Ribosome biogenesis [BR:
lav03009
]
Eukaryotic type
Pre-60S particles
Helicases
100653830 (MTREX)
Transfer RNA biogenesis [BR:
lav03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
100653830 (MTREX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
DEXQc_Suv3
ResIII
Helicase_C
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
100653830
NCBI-ProteinID:
XP_023401418
LinkDB
All DBs
Position
Unknown
AA seq
1013 aa
AA seq
DB search
MADAFGDELFSVFEDDSTTAAGTKKDKEKEKGKWKGPPGSSEKAGKHFDVKLQSESPNSG
KKRDADFESTDEPIFGKKIRIEESVTEDLSLADLMPRVKVQAVETVEGCTHEVALPADED
YLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALRE
KQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSE
VMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHK
QPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLRDAGDLAKGDQ
KGRKGGTKGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVE
EVFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFA
TETFAMGINMPARTVLFTNARKFDGKDFRWISSVNTFKCSFLSGSADPLNSAFHLTYNMV
LNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR
QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL
DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLTAISSVRLYIPKDL
RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH
NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI
EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG
PLRQMQECAKRIAKVSAEAKLEIDEESYLSSFKPHLMDVVYTWATGATFAHICKMTDVFE
GSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVLLQASTYE
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcgttcggggatgagctcttcagcgtgttcgaggacgactcgaccactgca
gccggaaccaaaaaagacaaggaaaaggagaaggggaaatggaaggggcccccagggtct
tcggaaaaggccggaaaacattttgatgttaagttgcaatcagagtcacctaatagtgga
aaaaagagagatgcagatttcgaaagcacagatgaacccatttttggaaagaagatccga
atagaagagtcagtaactgaagatttaagtttggcagacctgatgcccagagtcaaggta
caggcagttgaaactgttgaaggatgtacacatgaggttgcgcttcctgcagatgaagat
tatttaccacttaaacctcgagttggaaaagctgcaaaggaatacccattcattcttgat
gcttttcaaagagaagctatccagtgtgttgacaataatcagtctgttttagtatctgca
cacacatcagcgggaaaaactgtgtgcgcggagtatgctattgcattggccttaagggaa
aaacagcgtgtaatatttaccagcccaattaaggctctgagtaaccagaaataccgtgaa
atgtatgaagaatttcaagatgttggtctgatgactggagatgttactataaatcctacg
gcatcttgtcttgttatgaccacagagattttgagaagtatgctgtacagaggttcggaa
gttatgcgagaagttgcttgggtcatatttgatgaaattcattacatgagagattcagag
cgtggtgtggtatgggaagaaactattattttgcttcctgataatgtccactatgtcttt
ctttcggctactattccaaacgctcgacaatttgctgaatggatttgccacttacacaag
cagccttgccatgtgatttatacagattatcggcctactccattgcagcattacattttc
ccagccggaggagatggcctccaccttgtagttgatgaaaatggtgacttcagggaagat
aattttaatactgcaatgcaagtgcttcgagatgcaggtgatttggcaaaaggagaccag
aaaggtcgaaaaggtggaactaaaggaccatcaaatgtgttcaagattgtgaagatgatt
atggaaagaaattttcaacctgtaattattttcagttttagtaagaaagattgtgaagct
tatgcacttcaaatgaccaaactagattttaacacagatgaagagaagaagatggttgaa
gaagtattcagtaatgcaattgactgcctgtctgatgaagataaaaagctccctcaggtt
gaacacgttcttcctcttttgaagcggggcattggtattcaccacggaggcttacttcct
attttaaaggaaaccattgaaattctcttttctgaaggattgataaaggccttatttgct
acagagacttttgctatgggaattaacatgccagctagaactgttttatttacaaacgcc
cgcaaatttgatggaaaagatttccgatggatttcctctgtgaatacattcaaatgttct
ttcctcagtggttcagctgatcctctgaatagtgctttccatttgacatacaacatggtt
ttaaacttactacgtgtagaagaaattaatcctgagtacatgttggaaaaatccttctac
cagtttcagcattatagagcaattccgggagtagtagagaaggtaaagaactcagaagag
cagtataataaaatagtaattcccaatgaagaaagtgtagtcatctattacaagattaga
caacagcttgccaaattgggtaaagaaattgaagaatatattcacaaaccaaagtactgt
ttaccgtttctacaaccaggtcgtttggtaaaggtgaagaatgaaggagatgactttggc
tggggagttgtggtgaacttctccaaaaagtcaaatgttaagcctaattctggtgaactg
gatcccttatatgtagtagaagtacttctgcgctgtagcaaagagagcttgaagaattca
gctactgaggctgcaaaaccagctaaacctgatgagaaaggagagatgcaggttgttcca
gttttggtgcatctcctgactgctatcagcagtgttaggctttacattcccaaagacctt
cgaccagtggacaacaggcagagtgttttaaaatcaatacaggaagttcagaaacgtttt
cctgatggtgttcccttattagatcccattgatgatatgggtattcaagatcaaggactc
aaaaaagtcatccagaaagtagaagcttttgagcatcgaatgtattctcatccacttcac
aatgatccaaatttggaaactgtgtatacgctttgtgaaaaaaaagcacagattgcaata
gatattaaatctgcaaagcgagaactgaagaaagcaagaactgtcctacaaatggatgag
ctcaaatgtcgcaaacgagttttaagaaggctgggatttgctacttcttctgatgtcata
gaaatgaaaggacgagtggcttgtgagataagcagcgctgatgagctgcttctaaccgag
atgatgtttaatggccttttcaatgacttatctgcagaacaggcaacagcgttactaagc
tgctttgtgtttcaagagaattctagtgagatgcctaaattaacagagcaattagcagga
ccacttcgtcaaatgcaggaatgtgctaaaagaattgcaaaagtttcagcagaagccaaa
ttagaaatcgatgaagaaagttatctaagctcatttaaacctcacctaatggatgtagtg
tatacctgggctactggagctacatttgcccatatctgcaaaatgacagatgtctttgaa
gggagcataattcgttgtatgaggcgcctggaagaactgcttcgtcagatgtgtcaagca
gcaaaagccattggaaacactgagctggagaataaatttgcagaaggaatcaccaaaatc
aagagagatattgtgttgctgcaagcctctacttatgaa
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