KEGG   Loxodonta africana (African savanna elephant): 100653866
Entry
100653866         CDS       T04351                                 
Symbol
WIPI2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X2
  KO
K17908  autophagy-related protein 18
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04136  Autophagy - other
lav04140  Autophagy - animal
lav05010  Alzheimer disease
lav05014  Amyotrophic lateral sclerosis
lav05016  Huntington disease
lav05017  Spinocerebellar ataxia
lav05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:lav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100653866 (WIPI2)
   04136 Autophagy - other
    100653866 (WIPI2)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100653866 (WIPI2)
   05014 Amyotrophic lateral sclerosis
    100653866 (WIPI2)
   05016 Huntington disease
    100653866 (WIPI2)
   05017 Spinocerebellar ataxia
    100653866 (WIPI2)
   05022 Pathways of neurodegeneration - multiple diseases
    100653866 (WIPI2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lav04131]
    100653866 (WIPI2)
   03029 Mitochondrial biogenesis [BR:lav03029]
    100653866 (WIPI2)
Membrane trafficking [BR:lav04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    100653866 (WIPI2)
Mitochondrial biogenesis [BR:lav03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    100653866 (WIPI2)
SSDB
Motif
Pfam: PROPPIN WD40_CDC20-Fz Beta-prop_EML_2 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd DUF7165 Beta-prop_RSE1_2nd Beta-prop_Vps41 BCAS3_WD40 DUF7099 Beta-prop_IFT140_1st RMC1_N VID27
Other DBs
NCBI-GeneID: 100653866
NCBI-ProteinID: XP_003416554
LinkDB
Position
Unknown
AA seq 436 aa
MNLASQSGEAGSGQLLFANFNQDNTSLAVGSKSGYKFFSLSSVDKLEQIYECNDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
DGMFLSASSNTETVHIFKLETVKEKPQEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICSLATIQKIPRLLVGASDGYLYMYNLDPQEGGECTLMKQHKLDGS
METTNEILDSASHDCPLVTQPYSTAIAKGTYVPPSPTRPAYTDDLGAVGGACLEEEAGAL
RLDEDSEHPPMILRTD
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgaacctggccagtcagagcggcgaggccggctccggccagctgctcttcgccaacttc
aaccaggacaacacgtccctagctgttggtagtaagtccggttataaatttttctccctt
tcttctgtggataagctggaacagatctatgaatgcaatgatacggaggacgtgtgcatc
gtagagagactcttctcgagcagcttagtggccattgtgagcctcaaagcccctagaaag
ctcaaagtctgccactttaagaagggcacggagatatgcaactacagctattccaacacc
atcttggccgtgaagttgaaccggcagaggttaatagtgtgtctggaagagtctctgtat
atacacaacattcgggacatgaaggtactgcacaccatcagggagacgcccccaaaccct
gcaggcttatgtgctctgtccataaacaatgacaattgttacttggcataccctgggagt
gcaaccatcggagaggtacaagtctttgacaccatcaatctgagagctgcgaatatgatc
ccagctcatgacagtcctctggcagcactggctttcgatgcaagcggcaccaaacttgcc
actgcttcagagaaggggaccgtgattagggtgttttccattccagaaggacagaaactc
tttgagttccggaggggagttaagaggtgtgtcagcatctgctcactggccttcagcatg
gatggcatgttcctctccgcgtccagcaacacagaaactgtgcacatcttcaaactcgag
actgtgaaggaaaaaccccaggaggagcccacgacctggactggctatttcggcaaagta
ctcatggcttccaccagctacttgccctcacaagtcacagagatgttcaaccagggtaga
gccttcgccaccgtccgcctgcccttctgtggccacaagaacatctgctcactagccaca
attcagaagattccccgactgctggtgggcgcgtctgacgggtacttgtacatgtacaac
ctggacccccaggaagggggcgaatgcaccctgatgaagcagcataagttggatggcagc
atggagacgaccaatgagatcttagactctgcatcccacgactgccccttagtcacccag
ccgtatagcacagccatagcgaaaggtacttatgtgcctccgtccccaacgagacctgcc
tacacagacgacctgggtgcagtgggcggcgcctgtctggaggaagaggctggtgccctg
cgactggacgaggacagcgaacatcctcccatgatccttcggacagactga

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