Loxodonta africana (African savanna elephant): 100654211
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Entry
100654211 CDS
T04351
Symbol
VCL
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04510
Focal adhesion
lav04520
Adherens junction
lav04670
Leukocyte transendothelial migration
lav04810
Regulation of actin cytoskeleton
lav04820
Cytoskeleton in muscle cells
lav05100
Bacterial invasion of epithelial cells
lav05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100654211 (VCL)
04520 Adherens junction
100654211 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100654211 (VCL)
04810 Regulation of actin cytoskeleton
100654211 (VCL)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100654211 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100654211 (VCL)
09174 Infectious disease: parasitic
05146 Amoebiasis
100654211 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lav04812
]
100654211 (VCL)
04147 Exosome [BR:
lav04147
]
100654211 (VCL)
Cytoskeleton proteins [BR:
lav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100654211 (VCL)
Exosome [BR:
lav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100654211 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
100654211
NCBI-ProteinID:
XP_003409116
LinkDB
All DBs
Position
Unknown
AA seq
1154 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQGDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGTSPVAMQKAQQVSQGL
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTSRA
VANSRPTKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLTAQLADLAARGEGESPQARTLASQLQDSLKDLKAQMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG
IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGQCSGALDLPSLKSWVVLCLRPAKSFLDS
GYRILGAVAKVREAFQPQEPDFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEE
KDEEFPEQKAGEAINQPMMMAARQLHDEARKWSSKPGSPAAEVGIGVVAEADTADAVGFP
VPPDMEDDYEPELLLMPSSQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAE
MSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTIS
TQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDA
GFTLRWVRKTPWYQ
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgccggtctttcatacgcgcacgatcgagagtatcctggagccggtggcgcagcagatc
tcgcacctggtgatcatgcacgaggagggcgaggtggacggcaaagccatccctgacctc
accgcgccggtggccgcggtgcaggcggccgtcagcaaccttgtccgggttggaaaagag
actgttcaaaccaccgaggatcagattttgaagagagacatgccaccagcatttattaaa
gttgagaatgcttgcaccaagcttgttcaggcagcccagatgcttcagggagacccttac
tcagtgccagctcgagattatctaatcgatggatcaagaggcatcctctctggcacatca
gacctgctcctcacctttgatgaggccgaggttcgtaaaattattagagtatgcaaagga
attttggaatatcttacagtggcagaagtggtggaaactatggaagatttggtcacttac
acaaagaatcttggaccaggaatgacaaagatggccaagatgattgacgagagacagcag
gagctcacccaccaggagcaccgagtgatgctggtgaactcaatgaacaccgtcaaagag
ttgctgccagttctcatttcagctatgaagatttttgtaacaactaaaaactcaaaaaac
caaggaatagaagaagctttgaaaaatcgcaattttacagtagaaaagatgagtgccgaa
attaatgagatcattcgtgtgttacaactcacttcttgggatgaagatgcctgggccagc
aaggacactgaagccatgaagagagcattggcctccatagactccaaactgaaccaggcc
aaaggttggctccgtgaccccagcgcctccccaggggatgctggtgagcaggccatcagg
cagatcttagatgaggctggaaaagtcggtgaactctgtgcaggcaaagagcgcagagag
atcctgggcacgtgcaaaatgctgggacagatgacagatcaagtggctgacctccgagcc
agaggacaaggaacctcaccagtggccatgcagaaagcccagcaggtgtctcagggtctg
gatgtgctcacggccaaagtggagaatgcagcccgtaagctggaagccatgacaaactca
aagcagagcattgcaaagaagatcgatgctgctcagaattggctggcagatccaaatggt
ggaccagaaggagaagaacaaattcgaggggctttggctgaagctcggaaaatagcagaa
ttatgtgatgatcctaaagaaagagatgacattctacgttcccttggagaaatatctgct
ctgacttctaaattagcagatctacgaagacaggggaagggagattctccagaggcccgg
gcgctggccaaacaggtggccacggccctgcagaacctgcagaccaagaccagtagggct
gtggccaacagcagacccaccaaagcagctgtccatcttgagggcaagattgagcaagcc
cagcggtggattgataatcccacagtggatgaccggggagtgggtcaggctgccatccgg
gggcttgtggctgaagggcatcgtctggctaatgtcatgatggggccttatcgccaagat
cttcttgcaaagtgtgaccgagtggaccagctgacggcccagctggctgacctggctgcc
agaggggaaggggagagtcctcaggcaagaacacttgcatctcagctccaagactcctta
aaggatctgaaagcccagatgcaggaggccatgactcaggaggtgtcagatgttttcagc
gataccacaactcccatcaagctgttggcagtggcagccactgcccctcctgacgcacct
aatagggaagaggtgtttgatgagagggcagctaactttgaaaaccattcaggaaggctt
ggtgccactgcagagaaggcggctgctgttggaactgctaataaatccacagtggaaggc
attcaggcatcagtgaagacggcgcgagaactcacaccccaggttgtctcggctgctcgc
atcttacttaggaatcctgggaatcaagctgcttatgaacattttgagactatgaagaac
cagtggatcgataatgttgaaaaaatgacagggctggtggatgaagccatcgacaccaaa
tctctgttggatgcttctgaagaagcaattaaaaaagacctggacaagtgtaaagtggcc
atggccaacattcagcctcagatgctggtcgctggggcaaccagcattgctcgtcgggcc
aaccggatcctgctggtggccaagagggaagtggagaactctgaggatcccaagttccgt
gaggctgtgaaagctgcctctgatgaattgagcaaaaccatctctccaatggtgatggat
gcaaaggctgtggccggaaacatttctgaccctgggcagtgctcaggggcattggacctg
cccagcttgaaaagttgggtggtcttgtgtttaaggcctgcaaagagcttcctggactcg
ggatatcggatcctgggtgctgtggccaaggttagagaagccttccaacctcaggagcct
gacttcccgcctcctcccccagaccttgaacagctccgcctaacagatgagcttgctcct
cccaaaccacctctgcctgagggtgaggtccctccgcccaggcccccaccaccggaggag
aaggatgaagagttccctgaacagaaggctggggaggcgattaaccagccaatgatgatg
gctgccaggcagctccatgatgaagctcgcaaatggtccagcaagccgggtagcccagcc
gctgaggtgggtataggtgttgtagctgaggcagatacggctgatgctgttgggttccct
gtcccccctgacatggaagacgattacgaacctgagctgctgttaatgccatccagtcag
ccggtcaaccagcccattctggccgcggctcagtcactgcatcgggaagctaccaagtgg
tctagtaagggcaatgacatcattgcagcagccaagcgcatggctctgctgatggctgaa
atgtctcggctggtaagagggggcagtggtaccaagcgggcactcattcagtgtgccaag
gacatcgccaaggcctcagatgaggtgactcggttagccaaggaggtcgccaagcagtgc
acagataagcggattagaaccaacctcttacaggtgtgtgagcgaatcccaactataagc
acccagctcaaaatcctgtccacagtgaaggccaccatgctgggccggaccaacatcagt
gatgaggagtctgagcaggccacagagatgctggttcacaatgcccagaacctcatgcag
tctgtgaaggagaccgtccgagaagcagaagcagcttcgatcaaaattcgaacagatgct
ggatttacactacgctgggttagaaagactccctggtatcagtag
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integrated database retrieval system
