Loxodonta africana (African savanna elephant): 100654256
Help
Entry
100654256 CDS
T04351
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03030
DNA replication
lav03410
Base excision repair
lav03420
Nucleotide excision repair
lav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100654256 (RFC5)
03410 Base excision repair
100654256 (RFC5)
03420 Nucleotide excision repair
100654256 (RFC5)
03430 Mismatch repair
100654256 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lav03032
]
100654256 (RFC5)
03036 Chromosome and associated proteins [BR:
lav03036
]
100654256 (RFC5)
03400 DNA repair and recombination proteins [BR:
lav03400
]
100654256 (RFC5)
DNA replication proteins [BR:
lav03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100654256 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
100654256 (RFC5)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100654256 (RFC5)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100654256 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
100654256 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_16
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
AAA_14
DEAD
DUF815
ResIII
AAA_5
AAA_19
ATPase_2
AAA_30
PhoH
nSTAND3
TIP49
AAA_7
TniB
DNAX_ATPase_lid
Mg_chelatase
Thioredoxin_6
bpMoxR
NPHP3_N
AAA_25
AAA_3
AAA_28
ABC_tran
Motif
Other DBs
NCBI-GeneID:
100654256
NCBI-ProteinID:
XP_010597241
LinkDB
All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
METSALKQQQQPSAAKSRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPRLEHVVEEEKVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG
HPLKSDIANILEWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPSSVRIH
LLIKMADIEYRLSLGTNEKIQLSSLIAAFQVTRDLIVAQA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcagcgctcaagcagcaacaacagccctcggcggccaagagcaggaacctg
ccctgggttgaaaaataccggccacagacactaaatgatctcatttctcatcaggacatt
ttgagtaccattcagaagtttatcagtgaggaccgactgccgcacctgcttctctacggt
cctcccggaacagggaagacgtccaccatcctggcctgtgctaaacagctctacaaagat
aaagaatttggctccatggtcttggagctgaatgcttcagatgaccgaggaatagatatc
gttcgaggaccaatcctgagctttgctagcacaaggacaatatttaagaaaggctttaaa
ctcgtgatcttggatgaagctgatgccatgactcaggacgcccagaatgccttgaggaga
gtgattgagaaatttactgaaaataccagattctgcctcatctgtaactatctgtcaaag
atcatccccgccttgcagtcacggtgtacgaggttccgatttggtcccctgactcctgaa
ttgatggtcccacgcttggaacacgttgtggaagaagagaaagttgatataagtgaagat
ggaatgaaagcactcgtaactctttccagtggagatatgagaagggctctgaacattttg
cagagcaccaacatggcctttgggaaggtgacagaggagactgtctacacctgcacgggg
cacccacttaagtctgacatcgccaacatcctggagtggatgctgaatcaagacttcacc
acagcctacaggaatattatggagttgaaaacgctgaaggggctggcgctgcatgacatc
ctgacagagatacacttgtttgtgcacagagttgactttccatcttcagttcgaatacat
ttattgatcaaaatggcagacatcgagtacagactttctcttggcaccaatgagaagatt
cagctcagttcccttattgctgcttttcaagtcacgagagacttgattgtcgcacaggcc
tag
DBGET
integrated database retrieval system
