Loxodonta africana (African savanna elephant): 100654300
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Entry
100654300 CDS
T04351
Symbol
TRPA1
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
100654300 (TRPA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lav04040
]
100654300 (TRPA1)
Ion channels [BR:
lav04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100654300 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
ANK_LRRK2
DUF7694
Motif
Other DBs
NCBI-GeneID:
100654300
NCBI-ProteinID:
XP_003408268
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MKRSLKKMLRLGEKKEPQDVSYEGVEEAAGDSKDSFKVIFERHACRLQNMIKKRSRSSRY
DDVNACPLHHAAVEGQVDLMEMIINDSCCDVLNVMDNYGNTPLHWATEKNQVESVKFLLS
RGANPNLRNNNMMAPLHIAVQCWHNEVVQVLTEHRSTNINLKGENGNTAVVTACSKDXSE
ALQILFNKGAKPCIPNKWGCFPIHQAVFSGAKKCMEIVLKFGEEHGYSRQCHINLVDNGK
HSPLHMAVQSGDLEMIKMCLDNGAQIDLRESGKCTALHFAATQGATEIVKLMISSDSSDS
DIVNAVDGNQETLLHRASLFDHHELADYLISMGADINSIDSEGRSPLLLATASASWNIVN
LLLSKGAQVDIKDHLGRNFLHLTVQQRYGLKNLRPEFMQMQRIKELVMDEDNNGCTPLHY
ACRQGVPVSVNNLLHFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLRDITDTRLLNEGD
LHGMTPLHLAAKNGHDKVVQLLLKKGALLLSDHDGWTALHHASIGGYTQTMKVILDTNLK
CTDQLDEEGNTALHFAAREGHAKAVTLLLSYDAEIVLNKQDASFLHVAIHNRRKEVVLTT
IRNKRWEECLKTFSHYSQSNKCPITEMVEYLPECMKVLLDFCMLHSTEDKSCRDYHIEYN
FRYLQCPLELTKKITPVKDVTYEPLATLNAMVQHNRIELLNHPVCKEYLCMKWLAYGFRA
HIINLGSYCLGLIPMTFLVISIKPGMGFNSTGIINETSNHSEMLDTKNSYSIKVCMILVF
LSSIFGYCKEVAQIFQQKRSYFWDHSNALEWIIYTTSIIFVLPLFTGIPAHVQWQCGAIA
IFFYWMNFLLYLQRFETCGIFIVMLEVIMKTLLRSTVVFIFLLLAFGLSFYVLLSVQDAF
SNPVLSIIQTFSMMLGDVNYRDSFLEPFLRNELAYPILSFIQLICFTMFVPIVLMNLLIG
LAVGDIAEVQKHASLKRIAMQVKLHTNLEKKLPLYFLRRVDQQSIVVYPNRPRYQGGLMC
MFHYMFSVQEARQEIPNVDTSLETEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISET
EDEDNRSSFQDKFKKEQLEQRRSKWNSVLRAVKEKTQCS
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagcctgaagaagatgctgcgccttggagagaagaaggagccccaggatgta
tcgtacgagggcgtggaggaagccgcgggcgactcgaaggactcatttaaggtgattttt
gaaagacacgcatgtagattacaaaacatgatcaagaaacgaagcagatcgagtcgctat
gatgatgtgaatgcctgtcctttgcatcatgctgcagtggaaggtcaagtggacctgatg
gagatgatcatcaatgactcctgttgtgacgtgctgaatgtgatggacaattatggaaat
acccctctgcactgggccacagaaaaaaaccaggtcgaaagcgttaaatttcttctcagc
agaggggcaaaccccaacctcagaaacaacaacatgatggcgccgctccacatagctgtg
cagtgctggcacaacgaggtggtgcaggtcttaactgagcacagaagtactaatattaat
ttgaaaggagaaaatggaaacacagctgtggtcaccgcctgctccaaagatnatagcgaa
gcactgcagattttgtttaataaaggagctaagccatgcataccaaataaatggggatgt
ttccctattcaccaggctgtgttttcaggagccaaaaaatgcatggaaatagtattaaag
tttggtgaagaacatggatacagcagacagtgtcatattaatttggtcgataatggaaaa
catagtcctctccacatggcggttcaaagtggcgacttggaaatgatcaaaatgtgcctg
gacaatggtgcacagatagatctgagggagagtggcaagtgcacagcccttcattttgct
gccacccagggagccacagagattgttaagctgatgatatcctccgattccagtgatagt
gatatcgttaacgcagtggatggaaatcaggagacgctgcttcacagagcctcattattt
gatcaccatgaacttgcagactatttaatttcaatgggagcagatattaacagcattgat
tctgaaggacgttctccacttctgttagcaactgcttctgcatcttggaatattgtgaat
ttgctgctttctaaaggtgcccaagtagacataaaagatcatcttggacgtaattttttg
catttgactgtacaacaacgttatggattaaaaaatttacgacctgagtttatgcagatg
caacgtattaaagagctggtcatggatgaagacaacaatggttgtacccccctacattat
gcatgtagacagggggttcctgtctctgtaaataacctgcttcactttaatgtgtctatt
cattccaaaagcaaagataagaaatcaccgctgcattttgcagccagttatggccgtatc
aatacctgccagaggcttttacgagacataaccgatacgaggcttttgaatgaaggtgac
cttcatggaatgacccctctccacttggcagcaaaaaacgggcatgataaagtcgttcaa
cttctcctgaagaaaggcgcattacttctcagtgaccacgatggctggactgctttgcat
catgcttctattggcgggtacactcagaccatgaaggtcatccttgataccaacttgaag
tgcacagatcagctagatgaagaagggaacactgcgcttcacttcgctgcaagggaaggc
catgccaaagccgttacacttctcctgagctacgatgctgaaatcgtcctaaacaagcag
gatgcctccttcttgcatgttgcaattcacaataggaggaaggaggtggttcttaccacc
atcaggaacaaaagatgggaagaatgccttaagacttttagccattattctcaaagtaat
aaatgtcccatcacggaaatggtggaatacctccctgaatgcatgaaagtacttctggat
ttctgcatgttacactccactgaagacaagtcatgtcgagactaccatatcgagtataat
ttcagatatctccaatgtccactagagctcaccaaaaaaataactcctgtaaaggacgtt
acatatgagcctcttgcaacactcaatgcaatggtacagcataaccgcatagagcttctc
aaccaccctgtttgtaaagaatatttatgtatgaaatggctggcttatgggtttagagcc
cacataataaacctgggatcttactgtcttggtctcatacctatgacctttcttgttatc
agtataaagccaggaatgggtttcaactcaactggaatcatcaatgaaactagtaatcat
tcagaaatgttagacaccaagaattcatattctataaaagtctgtatgatattagttttc
ttatcaagtatatttggatattgcaaggaagtggcccaaattttccaacagaaaagaagt
tacttctgggatcatagcaacgcacttgaatggattatctacacaacaagcatcattttt
gtgttgcccttgttcactggtataccagctcatgtgcagtggcagtgtggagcaattgct
atattcttctattggatgaacttcttactgtatcttcagagatttgaaacttgtggcatt
ttcattgttatgttggaagtaattatgaaaaccttgttgaggtcaacggttgtgtttatt
ttccttcttctggccttcggactgagcttttatgtcctcctgagtgtacaggatgccttc
agcaacccagtactgtcaatcatccagaccttcagcatgatgttgggagatgtcaattac
cgtgattcttttctagaaccttttctgaggaacgaattggcatatccaattctgtccttt
atacagcttatttgcttcacaatgtttgttccaattgtcctcatgaatttacttattggt
ttggcagtcggtgacattgctgaggtccagaaacatgcatcgttgaagaggattgccatg
caggtgaaacttcataccaacttagagaagaaactgccgctctacttcctacgcagagtg
gatcagcagagcatcgtcgtgtaccccaacagacccagataccaaggggggctaatgtgt
atgtttcactatatgttctccgtccaagaagcaagacaagaaataccaaatgtcgataca
tctttagaaacagagatattgaagcagaaataccggctaaaggatctcacttctcttctg
gaaaaacagcatgagctcattaaactcatcattcagaagatggagatcatctcagagaca
gaggatgaagataaccgcagttcttttcaagacaagtttaaaaaagagcagttggaacaa
aggagaagcaaatggaattcagtgttgagagcagtaaaggaaaagacccagtgctcttag
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integrated database retrieval system
