Loxodonta africana (African savanna elephant): 100654861
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Entry
100654861 CDS
T04351
Symbol
VPS50
Name
(RefSeq) syndetin isoform X4
KO
K23288
syndetin
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lav04131
]
100654861 (VPS50)
Membrane trafficking [BR:
lav04131
]
Protein recycling
Others
EARP complex
100654861 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
100654861
NCBI-ProteinID:
XP_003407193
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPLESLSDLGAIESLRVPGKEEFRELREQATDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSTSEG
SNVIGTEETNFDRGYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQPASTSSKTVTLFEQYCSGGNPFEIQANHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDQL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTGTLTAAEERKEKVPSPHLSQLVVLTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNDVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaataaaatctctcatgacccgacagggtctgaaaagccctctggagagcctc
agcgatcttggcgccattgagagtctccgggtccctggaaaggaggaattcagagaactt
cgagaacaagcaaccgaccctcaagctgaacaagaactaattaatagtattgaacaagta
tatttttctacagattcatttgatattgttaaatatgagctggagaagctccctcctgtt
ctcaatttgcaagaattagaggagtacagagacaaactgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacaacctgcttatgtaaaggagctggaa
agagttacctcattacagacaggtcttcagttagctgctgttatctgcacaaatgggagg
agacacttgaatattgcaaaggaaggttttactcaagctagtttaggccttcttgcaaac
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaagacattg
caaagaacagatgttcgcctaagtgaaatgctagaggaggaagactatccaggagctatt
cagttgtgcctggaatgtcagaaagctgccagcacttttaaacattatagctgtataagt
gaactgaattcaaagctgcaggatactttagaacaaattgaggaacaattggatgtagct
ctttccaaaatctgcaagaattttgacattaaccattataccaaggttcaacaagcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcatatgcacttcacccaagcc
attcacaataccgtgtttcaagttgtgcttggttatgtggaactatgtgcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacacatgtcacaccagacagc
tatattccatgccttgctgacctctgcaaagcattgtgggaagtaatgcttagctattac
agaactatggaatggcatgaaaagcatgacaatgaggatactacttcaacttctgaagga
agcaatgtgataggtactgaagaaactaattttgatcgtggctacgtgaaaaagaaatta
gaacatgggcttacacgaatatggcaggatgttcaactaaaagtaaaaacctacttgctt
ggaactgacttgtctatattcaaatatgatgatttcatctttgtcttggacataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttacaagagtct
attagaaaacaaagtgtcaattatttcaaaaactaccatagaacacgacttgatgaactg
agaatgttcctagagaatgagacctgggagctttgtcctgttaagtcaaatttcagcatc
ttgcaacttcatgaatttaaattcatggaacagtctcgttcaccatcagtctcacctagt
aagcagcctgcctcaacttcctcaaaaacagtgaccctgtttgaacagtactgtagtggt
gggaatccatttgaaattcaggccaaccacaaagatgaagaaacagaagatgtcctggct
tctaatgggtatgaatctgatgaacaagaaaagagtgcctatcaggagtatgatagtgac
agtgatgtccctgaggaactaaaacgagattatgtggatgagcagacaggcgatgcccct
gtgaaaagtgtttctcgagaaaccctaaaaagcaggaagaaatcagattacagcctaaat
aaagtgaatgcacccatcttaacaaatactacattgaatgtaataagacttgttggaaag
tatatgcagatgatgaacattcttaagccaattgcatttgatgttatccatttcatgtct
caactatttgattattacttgtatgcgatatatacattttttggtcggaatgatcagttg
gaatcaacaggattaggccttagtagtagtagattaagaacaactctaaacagaattcaa
gaaagccttattgatctggaagtttcagctgatcctactggcacactcacagcagcagaa
gagagaaaggagaaggtaccgagcccgcacctcagccagctagtggttttgacgtctggg
gatacgttatatgggctggcagaaagagtggtagccacagaatccttggtattcttggct
gaacaatttgagttccttcagccccatctggatgctgtgatgcctgcagtcaaaaaaccc
tttcttcagcaattttattctcagacggtctcaactgccagtgaacttcgcaaaccaatt
tactggattgtagctggtaaagccattgattatgaacaaatgctgctcctcatggctaat
gtgaaatgggacgtaaaagaaattatgtcacagcacaacatatatgtagatgcattatta
aaggaatttgaacagtttaacaggaggttaaatgacgtttctaagagagtacggatcccc
ttgcctgtgtctaatatcctgtgggaacattgcatccgactagctaatagaactattgtg
gaaggatatgccaatgtcaagaaatgtagcaatgagggtcgtgccttgatgcaattggat
tttcaacagtttttaatgaaacttgaaaagctaacagatattagacccattcctgataaa
gaatttgtggaaacttatattaaagcctactacctgaccgagaatgacatggaacgctgg
atcaaggagcacagggagtattcaacaaagcagctgaccaatctggtgaatgtgtgcttg
ggatcccatatcaataagaaagcaagacagaaacttctggcagctatagatgatatagac
agacccaaaagataa
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