Loxodonta africana (African savanna elephant): 100655044
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Entry
100655044 CDS
T04351
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
100655044 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lav03400
]
100655044 (XRCC5)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
100655044 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
Curto_V2
Motif
Other DBs
NCBI-GeneID:
100655044
NCBI-ProteinID:
XP_003405959
UniProt:
G3T5U0
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MARPGNKAAVVLCADVGFAMSNSFLDEESSLEQAKKVMTMFVQRQVFAESKDEVALVLFG
TDGTDNALAQENQYQNITVHRHLMLPDFDLLEDIESKIQPGSKHADILDALVVCMDLIQQ
ETVGKKFEKRHIEVFTDLSSPFSKDQLDVIIHNLKQSGISLQFFLPFSVGGEDGTGDRGD
GSLRLGHHGPSFPQKGITEQQKEGIQVVKRMMMSLEGDSGLDEIYSFSESLRQLCVFKKI
ERRSMPWHCQLTVGSNLAIKIVAYKSIQQETIKKTWAVVDARTLKKEDIQKETVYCLNDD
DETEVPKEDTIQGFRYGSDIVPFSKVDEEQMKYRSEGKCFSVLGFCRSPQVQRRFFMGNQ
VLKVFAEKDDEAAAVALSSLIHALDELDMVAVVRYAYDKKANPQVGVAFPHIKDAYECLV
YVQLPFMEDLRQYMFSSLKNNKKYTPTEAQLNAVDALIDSMSLVKKDEEEDTIEDLFPTT
KIPNPQFQRFFQCLLHRALHPQEPLPPIQQHILNMLDPPTEVTAKSQIPLSEIKTLFPLT
EAIKKRDQITAQDIFQDNQEEGSVSKKCKTEEADIPFSITSMAEGRVTSVGSVNPAENFR
VLVRQKNASFGEVSHQLISHIEQFLDSNETPYFMKSMDCIKAFREEAIQFSEEQRFNSFL
KALQEKVKMKRLHHFWEIVVQDGITLISKDEASGSSVTAEEAKKFLALKEKPAEDTAIYE
EGGDVDDLLDMI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcacggccgggaaataaggcagctgttgtgctgtgtgcggatgtgggctttgccatg
agtaactcttttcttgatgaagaatcatcattagaacaagcaaagaaagtgatgaccatg
tttgtccagcgacaggtgtttgctgagagcaaggatgaggttgcgttagtcctgtttggt
acggatggcactgacaatgcccttgctcaggaaaatcagtatcagaacatcacagtgcac
agacacctgatgctaccagattttgatttgctggaggacatcgaaagcaaaatccaacca
ggttctaaacatgccgacatcctggatgcacttgtcgtgtgcatggatttgattcaacag
gaaactgtaggaaagaagtttgagaagaggcatattgaagtgttcactgacctcagcagc
ccattcagcaaagatcagttggatgttataattcataacttgaagcaatctggcatctcc
ctgcaattctttttgcctttctcagttgggggggaagatggaactggggacagaggagat
ggcagcttgcgcttgggccaccatggaccctcctttccccaaaagggaattactgagcag
caaaaagaaggtattcaggtggtgaagaggatgatgatgtctttagaaggtgacagtgga
ctggatgaaatttattccttcagtgagagcctgagacaactgtgtgtctttaagaaaatt
gagaggcgctccatgccctggcattgtcaactgaccgttggctccaatttggccataaag
attgtggcctataaatcgattcaacaggagacaattaaaaagacttgggcagttgtggat
gcaagaaccctgaaaaaagaagatattcaaaaggaaacagtttattgcttaaatgacgat
gatgaaactgaggttccaaaagaggacactattcaagggttccgctatggaagtgatata
gttcctttctctaaagtggatgaggaacaaatgaaatacagatcagagggaaagtgcttc
tctgttttgggattttgcagatctcctcaggtccagagaaggttctttatgggaaatcaa
gttctaaaggtctttgcagaaaaagatgatgaggcagcagcagttgcgctgtcctccctg
attcacgctttggatgaattagacatggtggccgtagttcgatacgcctatgacaaaaaa
gctaatcctcaagttggtgtggcttttccacatatcaaggatgcctatgagtgtttagtg
tacgtgcagctgcctttcatggaagacttgcggcaatacatgttttcatccttgaaaaat
aataagaaatacactcccacagaggcccagctgaatgctgttgatgctttgattgactcc
atgagtttggtaaagaaagatgaggaagaagacaccattgaagacttgtttccaaccacc
aaaatcccaaatccccaatttcagagattttttcagtgtttgctgcatagagctctacat
ccccaggagcctctgcccccaattcagcagcatattttgaatatgctggatccccccact
gaggtgacagctaaaagtcagattcctctttctgaaataaagacactcttccctctgact
gaagccatcaagaaaagggatcaaataactgctcaggacattttccaagataaccaagaa
gaaggatctgtctctaaaaaatgcaagacggaggaagcagacatcccctttagtatcacc
agcatggctgagggcagggtcaccagtgttggaagtgtgaatcctgctgaaaacttccgt
gttctagtgagacagaagaatgccagctttggggaagtgagtcaccagttaataagtcat
attgaacagtttttggatagtaacgagacaccgtattttatgaagagcatggactgtatc
aaagccttccgggaagaagccattcagttttcagaagagcagcgctttaacagtttcctg
aaagctcttcaggagaaagtgaaaatgaaacggttacatcacttctgggaaattgtcgtt
caggatggaattactctgatcagcaaagatgaagcctctggaagctctgtcacagctgag
gaagccaaaaagtttctggccctcaaagaaaaaccagctgaagacacagccatatatgaa
gaaggtggtgatgtggatgacttactggacatgatatag
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