Loxodonta africana (African savanna elephant): 100655345
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Entry
100655345 CDS
T04351
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04151
PI3K-Akt signaling pathway
lav04510
Focal adhesion
lav04512
ECM-receptor interaction
lav05165
Human papillomavirus infection
lav05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100655345 (TNC)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100655345 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100655345 (TNC)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100655345 (TNC)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100655345 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lav00536
]
100655345 (TNC)
Glycosaminoglycan binding proteins [BR:
lav00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100655345 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
EGF
NDNF
hEGF
fn3_2
Motif
Other DBs
NCBI-GeneID:
100655345
NCBI-ProteinID:
XP_003407830
LinkDB
All DBs
Position
Unknown
AA seq
2201 aa
AA seq
DB search
MGATTRLLVGIFIALLALPTKGGVLKKVIRHKRQSGVNLTLPEENQPVVFNHVYNIKLPM
GSQCSVDLESAGVEKDLAPQSEPSESFQEQTVDGENQIVFTHRINIPRRACGCAAAPDIK
ELLSRLEELESLVSSLREQCTTGASCCPQSAEGRLDTRPFCSGRGNFSTEGCGCVCEPGW
KGPNCSEPECPGNCHLRGQCIEGQCVCPEGFTGEDCSQLACPSDCNDQGKCVNGVCVCFE
GYAGADCSQEVCPVPCSKEHGRCVDGRCVCKDGFAGDDCNEPLCLNNCYNRGRCVENECV
CDEGFTGQDCSELTCPRDCFDRGRCLNGTCSCEEGFTGEDCGQLTCPNACRGQGRCEEGQ
CVCDEGFAGADCSEKRCPADCHNHGRCVAGQCECDDGFTGPECGELKCPNDCSHHGRCVN
GQCVCDEGYTGEDCSQRRCPNDCNSRGRCVQGKCECEQGFQGYDCGEMSCPSDCHQRGHC
VNGMCVCDDGYTGEDCRDLRCPKDCSNRGHCADGQCVCEDGFTGPDCAELSCLNDCHQQG
RCVNGQCVCHEGFMGRDCKEQRCPDDCNGRGRCVDGQCICHEGFTGLDCGQRSCPNDCSN
WGECVSGRCICNEGHAGEDCSEVSPPKDLVVTEVTEETVNLAWDNEMRVTEYLIMYTPTH
AGGLEMQFRVPGNKTSATIRELEPGVEYLIRVFAILENKRSIPVSARVATYLPTPEGLKF
KSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETTYQQTGLAPGQEYE
ISLHIVKNNTRGPGLKRVTTTRLDAPSQVEVKDVTDTTALITWFKPLAEIDGIELSYGIK
DVRGDRTTIDLMPDENQYSIGKLKPDTEYEVSLISRRGDMSSNPARETLTTGLDAPRNLR
RISQTDNSITLEWRNGKAAIDNYRIKYAPISGGDHAEVDVPKSQQATTKTTLTGLRPGTE
YGIGVSAVKEDKESNPATINAATEIDAPKDLRVSETTETTLNLLWKTPLAKFDHYRLNYS
LPMGQQMQVQLPRDTTSHVLRGLEPGQEYTIILTAEKGRHKSKPARVKASTEQAPELGSF
TVTEVGWDGLQLNWTAADQAYEHFVIQVQEANKVEAAQNLTVPGSLRAAYIPGLKAATPY
TVTIYGVIRGYRTPALSAEASTGDTPKLGEVAVTEVGWDALKLNWTAPEGAYELFFIQVQ
ETDTLEAAHNLTVPGGLRSVDLTGLKADTHYSITIRGVTQDYSTTPVSVEVLTEEVPDVG
NLTVTEVSWDTLRLDWTAPHGTYEQFVIQVQEADRAEEARNLTVPGSLRLVEIPGLRAGT
SYTITLQGVVRGRSTRPLAVEVITEELPQLGELAVTEVGWDGLQLNWTAADQAYEHFVIQ
VQEANKVEAAQNLTVPGSLRAVYIPGLKAATPYRVTIYGVTRGYRTPALSAEASTAKEPE
IGNLNVSDITPESFNLSWTATDGVFETFTIEIIDSNRLLETVEYNISGAERTTHISGLPS
STDFIVYLSGLAPSIRTKTISTTATTEALPLLENLTISDINPYGFTVSWMASENAFDSFL
VTVVDSGKLLDPQEFTLSGTQRKLELRGLITGIGYEVMVSGFTQGHQTKPLRAEIVTEAE
PEVDNLLVSDATPDGFRLSWTADDGVFDTFVLKIRDTKKQSEPLEITLLAPERTRDITGL
REATEYEIELYGISSGRRSQPVNAIATTAMGSPKEIIFSDITENSATVSWKAPTAQVESF
RITYVPIAGGTPSVVTVDGTQTQTRLVKLIPGVEYLVNVIAMKGFEESDPISGSLTTALD
GPSGLVTANITDSEALAMWQPAIATVDSYVISYTGDRVPEITRTVSGNTVEYALTDLQPA
TDYTLRIFAEKGPQKSSVITTKFTTDLDSPRDLTATEVQSETALLTWRRPRAPVTGYLLV
YESVDGTVKEVILGPDTTSYNLAELSPSTHYTAKIQALNGPLRSKVIQTIFTTTGLLYPF
PKDCSQAMLNGDTTSGLYTIYLNGDKAQPLQVYCDMTSDGGGWIVFLRRSNGREDFYRNW
KAYAAGFGDHRDEFWLGLDNLSKITAQGQYELRVDLRDHGETAYAVYDRFSVGDARSRYK
LKVEGYSGTAGDSMAYHNGRSFSTFDKDTDSAITNCALSYKGAFWYKNCHRVNLMGRYGD
NNHSQGVNWFHWKGHEHSIQFAEMKLRPSNFRNLEGRRKRA
NT seq
6606 nt
NT seq
+upstream
nt +downstream
nt
atgggggccacaactaggctgttggtggggatcttcatagctttgcttgctctccccacc
aaaggtggggtccttaagaaagtcatccggcacaaacgacaaagtggggtgaacctcacc
ctgccagaggagaaccaaccagtggtgtttaaccatgtctacaatatcaagctgcccatg
gggtctcagtgttcagtggatttagaatcagccggtgtggagaaagatctggccccacag
tcagagcccagcgaaagcttccaggagcagacggtagacggggaaaaccagatcgtcttc
acacaccgcatcaatatccctcgccgagcctgtggctgtgctgccgcccctgatatcaag
gagctcctgagcaggctagaggagctggagagcctggtctcttccttgcgggagcagtgt
accacgggagcaagctgctgtcctcagtctgccgaaggccgcctggataccaggcccttc
tgcagtggccgtgggaacttcagcaccgaaggatgtggctgcgtgtgtgaacctggctgg
aaaggccccaactgctctgagcccgaatgcccaggcaactgtcacctgcgaggccagtgc
attgaggggcagtgcgtctgccctgagggcttcaccggagaggactgcagccagctggcc
tgtcccagcgactgcaacgaccagggcaagtgtgtaaacggcgtctgtgtctgtttcgaa
ggctatgcgggggctgactgcagccaggaggtctgccctgtgccctgcagcaaggagcac
ggcaggtgtgtggacggacggtgtgtgtgcaaggacggctttgccggcgacgactgcaac
gagcccctctgcctcaacaactgctacaaccgtgggcggtgcgtggagaacgagtgtgtg
tgcgatgagggcttcacgggccaggactgcagcgagctcacctgccctagggactgcttc
gaccggggccgctgcctcaacggcacctgctcctgcgaagaaggcttcaccggggaagac
tgcggccagctcacctgcccgaatgcctgccgtggccagggccggtgcgaggagggccag
tgcgtgtgtgacgagggcttcgcaggggcggactgcagtgagaagcggtgtcctgcagac
tgtcacaaccacggccgctgcgtcgccgggcagtgtgagtgtgacgatggcttcacggga
cccgagtgtggagagctcaagtgccccaacgactgtagccatcacggccgctgcgtcaac
gggcaatgcgtgtgtgacgagggctacaccggggaggactgcagccagaggcgctgcccc
aacgactgcaacagccggggtcgctgtgtccagggcaagtgtgagtgcgagcaaggcttc
cagggctacgactgcggtgaaatgagctgccccagtgactgtcaccagcgtgggcactgt
gtgaatggcatgtgtgtctgtgacgacggttacacgggtgaggactgccgggacctgcga
tgccccaaggactgtagcaaccggggccactgtgcggacgggcagtgtgtgtgcgaggac
ggcttcaccggccctgactgtgcagaactctcctgtctgaatgactgccaccagcagggc
cgctgtgtgaatgggcagtgcgtgtgccacgaaggtttcatgggcagagactgcaaggag
caaaggtgccccgatgactgcaatggtcggggccgctgcgtggatggccagtgcatctgc
cacgagggcttcacaggcctggactgtgggcagcgctcctgccccaatgactgcagcaac
tggggagagtgtgtctcaggccgctgcatctgcaatgaaggccatgccggggaagactgt
tctgaggtgtcccctcccaaagacctcgtcgtgacagaagtaacagaagagacagtgaac
ctggcctgggacaatgagatgcgagtcacagagtatctcatcatgtacacgcctacccac
gcaggtggcctagaaatgcagttccgagtccccggaaataagacatccgccaccatccgg
gagttggagcctggtgtggaatacctcatccgtgtgttcgccatcctggaaaacaagaga
agtattcccgtcagcgccagggtggccacttacttgcctacacctgaaggcttaaaattc
aagtccatcaaggagacatctgtggaagtagagtgggatcctctggacattgcttttgaa
acctgggagatcatcttccggaatatgaataaagaagatgagggagagatcacaaaaagc
ctgaggaggccagagaccacatatcagcaaactggcctagctcctgggcaagagtatgag
atatcactgcacatcgtgaaaaacaacacccgaggtcctggtctgaaaagggtgacaacc
acccgcttggatgcccccagccaagtcgaggtgaaagacgtcacagacaccactgctctg
atcacctggttcaagcccctggctgagattgatggcatcgagctctcctatgggatcaaa
gacgtgcggggcgaccgcaccaccatcgacctcatgcctgatgagaaccagtactccatc
gggaagctaaagccagacactgagtacgaggtgtccctcatttcccgcaggggtgacatg
tcaagcaacccagccagagagaccctcactacaggcctggatgctcccaggaatctcaga
cgcatctcccagacagacaacagcatcaccctggaatggaggaacggcaaggctgccatc
gacaactatagaattaagtacgcacccatctccggaggtgaccacgcagaggttgacgtc
ccgaagagccaacaagccacaaccaaaaccacgctcacaggtctgaggccaggaactgaa
tatggaattggagtgtccgctgtgaaggaggacaaggagagcaacccagccaccatcaat
gcggccacagagatagatgctcccaaggacctccgggtgtcagaaactacggaaaccacc
ctgaatctgctctggaagacacccctggccaagtttgaccattaccgcctcaactacagc
ctccccatggggcagcagatgcaggtgcagcttcccagagacaccacctcccacgttctg
agaggcctggagcctggacaggaatacaccatcatccttacggcagagaaaggaagacac
aagagcaaacccgcgcgggtaaaggcatccaccgaacaagcccctgaactgggaagcttc
acagtgactgaggttggctgggatggcctccaactcaactggaccgcagccgaccaggcc
tatgagcactttgtcattcaggtgcaggaagctaacaaggtggaggcagctcagaacctc
acggtgcctggtagcctgagggctgcgtacatcccaggtctcaaggctgccaccccctat
acagtcaccatctatggggtgattcggggctatagaacaccagcactctctgccgaggcc
tccacaggggacactcccaagttgggagaggtagcagtgaccgaggtgggctgggatgcc
ctcaagctcaactggaccgctccagaaggggcctatgagctctttttcattcaggtgcag
gagacagacacattagaggcagcccacaacctaacagtcccgggaggactgaggtccgtg
gacctcactgggctcaaagcagacactcattatagcatcaccatccgtggggtcactcag
gactacagcacaacccctgtctctgttgaagtcttgacagaggaggttccagatgtggga
aacctaacagtgaccgaagttagctgggataccctcagactggactggactgccccacat
ggaacctatgaacagtttgtcattcaggtccaggaggctgaccgggcagaagaggctcgc
aatcttacagttcctggcagcctgcgtttggtggaaatcccaggccttagggctggtact
tcttacacaatcactctgcaaggtgtggtgaggggccgcagcactcgaccccttgctgtg
gaagtcatcacagaggaactcccccagctgggagagttggccgtgactgaggttggctgg
gatggcctccaactcaactggaccgcagccgaccaggcctatgagcactttgttattcag
gtgcaggaggctaacaaggtggaggcagctcagaacctcacggtgcctggtagcctgagg
gctgtgtacatcccaggtctcaaggctgccaccccctatagagtcaccatctatggggtg
actcggggctatagaacaccagcactctctgccgaggcctccacagccaaggaacctgaa
attggaaacttaaatgtttctgacataactcctgagagcttcaatctctcctggacagct
actgatggggtcttcgagacctttaccattgaaattattgattccaataggttgctggag
acggtggaatataatatctctggtgctgaacgaaccacccatatctcagggctcccctct
agtactgattttattgtctacctctctggacttgctcccagcatccggaccaaaaccatc
agtaccacagccacaacagaggccctgccccttctggaaaacctaaccatttccgacatt
aatccctacgggttcacagtttcctggatggcatcggagaatgcctttgacagcttccta
gtaacggtggtggattctgggaagctgctggacccccaggaattcacactttcaggaacc
cagaggaagctggagcttagaggcctcataactggcattggctatgaggttatggtctct
ggcttcacacaagggcaccaaaccaagcccttgagggctgagattgttacagaagccgag
ccagaagttgacaaccttctggtttcagatgccaccccagatggtttccgtctgtcctgg
acagctgatgatggagtcttcgacacttttgttctcaaaatcagagataccaaaaagcaa
tctgagccactggaaataaccctccttgcccctgaacgtaccagggacataactggtctc
agagaggccactgaatatgaaattgaactctatggaataagcagtggaaggcgatcccag
ccagtcaatgctatagcaacaacagccatgggctccccgaaggaaatcattttctcagac
atcactgaaaactcagccaccgtcagctggaaggcacccactgcccaggtggagagcttc
cggattacctatgtgcccattgccggaggtacaccctcggtggtcactgtggatggaacc
cagactcagacccggctggtgaaactcattcctggagtggaataccttgtcaacgtcatc
gccatgaaggggtttgaggaaagcgaccccatctcaggatcactcactacagctctggat
ggtccatctggcctggtgacggccaacatcaccgactcagaagcgttggccatgtggcag
ccagccattgctaccgtggacagttacgtcatctcctacacaggggacagagtgccagaa
attacacgcacggtgtccgggaacacagtggagtacgctctgaccgacctccagcctgcc
acggactacacactgagaatctttgcagagaaagggccccagaagagctcagtcatcact
accaagttcacaacagacctcgattctccaagagacttgaccgctactgaggttcagtca
gaaactgccctcctcacctggcgacgcccacgggcacctgtaactggctacctcctggtc
tatgaatctgtggacgggacagtcaaggaagtaattttgggtccagacaccacctcctac
aacctggcagagctgagcccatccacccactacacggccaagatccaggcattgaatggg
cccctgaggagcaaggtgatccagaccatcttcaccacaactggactcctgtacccattc
cccaaggactgctcccaagcaatgctaaatggagacacgacctctggcctctacacaatt
tatctgaatggcgataaggcccagcccctgcaagtctactgtgacatgacctctgacggg
ggtggatggattgtgttcctgagacgcagcaatggacgcgaggatttctatcgaaactgg
aaggcatatgctgctggatttggggaccacagagatgaattctggttggggctggacaac
ctgagcaaaatcacagcccaggggcagtacgaactccgggtggacctgcgggaccacgga
gagacagcctacgccgtctacgacaggttcagcgtgggagatgccaggtcgcgctacaag
ctgaaggtggaagggtacagcgggacagcaggtgactccatggcctaccataatggcaga
tccttctccaccttcgacaaagacacagactcagccatcaccaactgtgccttgtcctac
aaaggagctttctggtataagaactgtcaccgcgtcaacctgatgggcagatatggggac
aacaaccacagtcagggcgttaattggttccactggaaaggccatgaacactcaatccag
tttgctgagatgaagctgagacccagcaacttcagaaatcttgaaggcaggcgcaagcgg
gcataa
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integrated database retrieval system
