Loxodonta africana (African savanna elephant): 100655372
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Entry
100655372 CDS
T04351
Symbol
SYNM
Name
(RefSeq) LOW QUALITY PROTEIN: synemin
KO
K10376
desmuslin
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lav04812
]
100655372 (SYNM)
Cytoskeleton proteins [BR:
lav04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
100655372 (SYNM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Motif
Other DBs
NCBI-GeneID:
100655372
NCBI-ProteinID:
XP_010592157
LinkDB
All DBs
Position
Unknown
AA seq
1257 aa
AA seq
DB search
MLSWRLQTRPEKAELQELNARLYDYVCRVRELERENLLLEEELRGRRRQEDLWAEGQVRF
AEEARALRQQLDELSWATALAEGNRDALRRELRELHHLGPEEARPPAAPLDPNRGAQNLS
LLEFWGAXXXLEALLDRLQAERRGLDAAHDRDVRELRSRAAAXPCTTRRATGPXAPPPRL
REVHDSYALLVAESWRETVQLYEDEVRELEEALRRGLESRREAEEETRLCAQEAEALRFE
AHELEQLRAQLEDELLRMQEAYELQAEERQRVIDCLEDEKAALALAMTDRLRDYQELVQV
KTSLSLEVATYRALLEGESNPEILIRMKHVENIPEEFRNTSYQYTSSVLQRENERNQFPR
QKVPPASLNHLSGLYPSRRTGSAARGSFLGSGYSSAASVRQENAYEKTANNRTSFRTFSP
AYGLSRKTEEQVKTLSERPKTEGEGDVISSIARGSTVAQKTYQERRDNMAVGASESTWSN
ERTVTSRKETEVKATREQGRDIPGTIRTKQEEKVFDSKEKASEERNLRWEELTKLDKEAR
KRESQQMREKAKGKELLKEKNVPEREIPISLEASQGSTPEVSPEGFQTSVKKDVSGGTDE
RVETREASFRMDAGDIPSSVKGDSMTETIAENIVSSILKQFTQSPDTEASANSFPDTKVT
YMERKELPGDRKTKTEIIVESKLTEDIDVSDEAGLDYLLSKDVKEVGLKGKSAEQMIGDI
INLGLKGKEGKAKVVSVEIIEEPMSYVGAEKAEEFSTPFEVEEVDDVSPGSKGLVEEKEG
YGETDTTFSVNERKRTKQPPQNTTHVEEVMEAGDWEGEQSYFVSTPDEHPGGHDREEGSV
YGQIHIEEESTIKYSWQDEIVQGTQRGRKRDDLLGEKVVKPSDVPAPAPEGDLDSSYWRE
QAKSDEFHAEPTVTEKEIKIPREFHTSIKDVFSKEPKQQLGEVIGQLEESLPERVREELS
VLTREGAGEPESISVDVKQVQTSGGGTTTLVAEVNLSQTIDADKLDLDKLSRDEASEIER
AVESVVRESLTKQHSHVPGSPDTEGGTEAPATGISFKRWATRELYSPSVEGDDASPVSPS
TEQVTRQGPVSATVEVSSPRGFAQSQVLENISQSVRHIQIGPTEIWRTEQVLSEGPTAEV
VEMDVSHVEAAPGSAQWTQEATVHFPEGKEAAAPGVSDGGAWRDAGSRKDQAEGRSFQAP
VGDGNQAQGPEGKEQAEFDKIVQLQRMVDQRSVVSDEKKVAVLYLDKEEEEGDGHWF
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcctggcggctgcagacgcgcccggagaaggctgagctgcaggagctcaatgcc
cggctctacgactacgtgtgccgggtgcgggagctggagcgcgagaacttgctcctggaa
gaggagctgcgcggccggcgcagacaggaggacctgtgggccgaaggccaggtccgcttc
gccgaggaggcgcgcgctttgcggcagcagctggacgagctgagctgggccacggcgttg
gccgaggggaaccgcgatgccctgcggcgcgagctgcgggagttgcaccacctgggcccg
gaagaagcgcgcccccccgcggcccccctggacccgaatcggggtgcgcagaaccttagc
ttattagagttttggggcgcnnnnnnnnccctcgaggcgctgctagaccggctgcaggcg
gagcgccgcggactcgacgcggcccacgaccgcgatgtgcgggagctgcgctcgcgcgct
gccgcctgaccatgcactacgcgccgcgccaccggcccgnncgcgcccccgccgcgcctg
cgggaggtgcacgacagctacgcgctgctggtggccgagtcatggcgggagacggtgcag
ttgtacgaggacgaggtgcgcgagctggaggaggcgctgcggcgcggcctggagagccgg
cgcgaggccgaggaggagacgcggctatgcgcccaggaggcggaggcgctgcgctttgag
gcgcacgagctggagcagctgcgcgcgcagctggaggacgagctgctgcggatgcaagag
gcttacgagctgcaggcggaggaacggcagagagtgattgactgcttggaggatgagaag
gcagcccttgccttggccatgaccgaccggctgcgggactatcaggagctcgtgcaggtg
aagaccagcctcagcctggaggtggcaacctatcgagccttactggaaggagaaagtaat
ccagaaatactgatccggatgaaacacgttgaaaatataccagaagaattcagaaacaca
tcctatcaatacaccagctcagtattgcagagggaaaatgaaagaaaccagttcccaagg
cagaaggtacctccagcgagtttaaatcacctctcggggctgtatccgagcaggcgtacc
ggaagtgctgcccgaggtagcttcctgggctctggatactcatctgcggcctccgtccgg
caggaaaatgcttatgaaaaaactgccaacaatcgaaccagcttcagaactttttctcca
gcctatggtctttcaagaaaaactgaagagcaggtgaaaaccctctctgaaagaccaaaa
actgaaggtgaaggtgatgtcatcagttccatagccaggggctccaccgttgcccaaaag
acgtaccaggaacgccgagacaacatggcagtgggcgcttctgagagcacatggtcaaat
gagaggactgtcacttcgagaaaggaaacagaagtgaaagccacaagggagcaaggtaga
gacataccaggaactatcagaacaaagcaagaagagaaagtgtttgattccaaagagaag
gcttctgaggagagaaacttaaggtgggaagaactgacaaagttagataaagaagcaaga
aagagggaaagtcagcaaatgagggaaaaggctaaagggaaggaattgctgaaagagaaa
aatgtgccagaaagagagataccgattagtctggaagcatcccagggcagcaccccagag
gtgtccccagaaggcttccagacgtctgtcaagaaggatgttagtggtgggacagacgaa
agggtggaaacaagagaggcaagcttcaggatggatgccggcgacattcccagctctgtg
aaaggtgactccatgactgaaaccattgcagaaaacattgtctccagtatccttaagcaa
tttacccagtctccagatacagaagcatctgctaattcttttccagacacgaaagtcact
tacatggaaaggaaagagcttcctggtgacaggaaaacaaagactgaaatcatcgtggag
tctaaactgactgaggatatcgatgtttcggatgaagctggcctggactaccttttaagc
aaggatgtgaaggaagtggggctgaaaggaaaatctgctgagcagatgataggagatatt
atcaatcttggtctgaaaggaaaagaggggaaagcaaaggtcgtcagtgtggagatcatt
gaagagcccatgagctacgtgggagcagagaaggcagaggagttctccaccccgtttgaa
gtggaagaggtcgatgatgtgtctccaggctccaaggggcttgttgaggaaaaggaaggt
tatggagaaacagataccacgttctcggtcaatgaacgtaaaaggaccaagcagccacct
cagaacacaactcatgttgaagaagtgatggaggcaggtgactgggagggagagcagagt
tactttgtgtcgactccagatgaacacccagggggccatgacagagaggaaggctctgtg
tacgggcagatccacattgaagaagaatccaccatcaagtactcgtggcaagatgagatt
gtgcaagggactcagaggggaaggaagagggacgacttgttgggagagaaggttgtgaag
ccatcggatgttccagctcccgctccggagggggacttggattcttcttactggagagaa
caagctaaaagtgacgagtttcatgctgagcccacagtcactgagaaggaaattaaaata
ccacgtgaatttcacacatccattaaggatgtcttctccaaggaacccaaacagcagctg
ggggaggttatcgggcagctggaggaaagccttcctgagcgagtgagggaagagctgtct
gtcctcactcgagagggtgcaggagagcctgagagcatttcggtggatgtaaagcaagtc
cagacttctggcggtggcaccacgaccttagttgctgaagtcaatctctcacagactata
gatgctgataagttagatctagacaaactgagcagagatgaagccagtgaaatagagaga
gctgtggagtcggtggtcagagagagtttgaccaagcaacatagccatgtgcctggaagc
cctgacacggaaggtggaacggaggccccagccactggcattagcttcaagcgctgggcc
accagggaactgtacagcccctctgttgagggggatgatgccagtccagtctctcccagc
acagagcaggtcacccgccagggtcccgtgtcggccaccgtagaagtcagcagccccagg
ggctttgcccagtcacaggtgctggagaacataagccagtctgtaagacacattcagata
ggccctactgaaatctggaggactgagcaagtcttgtctgaaggacccactgcagaagtg
gtggagatggatgtgagtcacgtagaggcggcccccggctccgcccagtggacacaagag
gccacggtccacttccctgaggggaaggaagcggcagctcccggtgtgtctgacggtgga
gcctggagagacgctggcagtaggaaggaccaggcagagggcaggagctttcaggcccct
gttggtgatggaaaccaggcccaggggccagagggcaaggagcaggctgagtttgataag
atagtgcagctgcagaggatggtggaccagagatcggtggtgtctgacgagaagaaggtt
gccgtgctctatctagacaaggaggaggaggagggcgatgggcactggttctga
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integrated database retrieval system
