Loxodonta africana (African savanna elephant): 100655396
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Entry
100655396 CDS
T04351
Symbol
POLR1A
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100655396 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lav03021
]
100655396 (POLR1A)
Enzymes [BR:
lav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100655396 (POLR1A)
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
100655396 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
100655396
NCBI-ProteinID:
XP_010598247
LinkDB
All DBs
Position
Unknown
AA seq
1713 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFNNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVVHLL
VCQLKVLEVXALQAVYELEHILSRFLEENSDPSAFEIQEELEQYTAKIVQNNLLGPQGAH
VKNVCESRSKLVAHFWKTHMSAKRCPHCKTGRSVVRKEHNSKLTITYPAIAHKKSNQKDA
ETPAPGIEDAQLGKRGYLTPTSAREHLITLWENEGFFLNYLFLGLEDVGMESRFNPSMFF
LDFLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDIVLIRKLLALMAQEQKLPYEVAAP
ATDEEKDSSIVMDRSFLSILPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIR
QILEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQ
ELRQAVINGPNVHPGASMVINEDGSRTALSASDLTQREAVAKQLLTPATGAPKPQGTKIV
CRHVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHF
PQSELGRAEACILACTDQQYLVPKDGQPLAGLIQDHMVSGTSMTIRGCFFTREEYMELVY
RGLTDKVGRVKIFPPAILKPFCLWTGKQVVSTLLINIIPKDHIPLNLTGKAKIGGKAWVK
EPPRPVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVL
TCLARLFTAYLQLYRGFTLDVEDILVKPKADVKRHRIIEESTHCGARAVRAALNLPEAAS
CDEIRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMV
QSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVSGRFLTG
IRPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFL
YGEDGLDIPKTQFLQPRQFPFLASNCEVIMKSKHVHEVLSRADPQKALRHFRAIKKWQSK
HPNTLLRKGAFLSYSQKVQAAVKALNLEGGNQNGRSPMTHEMLRMWYELDEQSRRKYQKK
AAPCPDPSLSVWRPDIHFASVSETFEKKVDAYSCEWASRAEKSYEKSEPSLERLRTLLQL
KWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASAN
IKTPMMSVPVFNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQESFRMETKQEKCRVYQLR
FQFLPHACYQQEKCLRPEDILRFMETRFFKLLMESIRKKNSKASAFRNVNTRRATQRDLD
NTGESRRNREQEDEEEEERIVDAEAEEGDADASDAKRREKQEEEVDYESEEEEEKEGEEN
EDEDMQEEGSVSGEGTEEQDQEVGPGPEEDMSLPQPRKAARGQGPQGAEAEERRIQAVRE
SHAFIEDYKYDTEESLWCEVTVKLPLMKISFDMSSLVVSLAQGAVVHATKGITRCLLNET
TNKMNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMANTYGIEAALRVIEKEIKD
VFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATMM
GSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctccaagaacatgccctggcggcgacttcagggcatttctttcgggatgtat
tcggccgaagagctcaagaaattaagtgttaaatccattacgaaccctcgatacttggac
agcctggggaacccatctgtgaatggcttgtatgatttagctttgggccctgcagattcc
aaagaggtgtgctccacctgtgtgcaggacttcaacaactgctctggtcatctgggccac
atcgagctcccgctgacggtgtacaaccccctgcttttcgataaactctacctgctgctc
cggggctcctgtttaaactgtcacatgctgacttgcccccgggctgtggttcacctctta
gtctgccagctgaaggttctagaagttngagccctgcaagcagtctacgaacttgagcac
attctgagcaggtttctggaagaaaactctgatccttctgccttcgaaattcaggaggag
ttagaacaatacacagccaaaatcgtacagaacaacctcctgggaccccagggagcacac
gtgaagaatgtctgtgagagcaggagcaagctcgttgcccacttctggaagacacacatg
agtgctaagcggtgtccccactgcaagaccgggcggtcagttgtccgtaaggagcacaac
agcaaactgacaatcacgtatccagccatagcacacaagaaaagtaaccagaaggacgca
gagaccccggctccaggcattgaggatgctcagctgggaaaacgaggatacttgacaccc
accagtgcccgagaacacctcatcactctctgggagaacgaaggattctttctgaattac
ctttttttgggactggaagatgttggcatggagtccagattcaatcccagtatgttcttt
ctagacttcttagtggtgccaccctcaaggtaccgtccggtcagtcgcctgggggaccag
atgtttaccaatggccagacggtgaacttgcaggctgtcatgaaggacatagttctgatc
cggaagcttctggcattgatggcccaagaacagaagctgccatacgaggtggcagcacct
gccacagatgaggaaaaagactcttcgattgttatggaccgctcctttttaagtatcctt
ccaggccagtccctcacagacaagctgtacaacatctggattcgccttcagagccatgtc
aatattgtgtttgatagtgaaatggacaaattaatgatggaaaagtaccctggcattaga
cagattctggaaaagaaggacggcctgttccgaaagcacatgatggggaagcgagtagac
tacgcagcccgctccgtcatctgcccagacatgtacatcaacaccaacgagattggaatt
cccatggtatttgccacaaaactgacctaccctcagccagtaaccccatggaacgttcag
gaactgagacaggcagtcatcaatggccccaatgtgcacccgggagcctccatggtcatc
aatgaggatggcagtcgtacagccctgagtgcctcagacctcacccagcgagaagctgtg
gccaaacagctcctgacaccagccacaggggctcccaaaccccaagggacaaaaattgtg
tgccggcatgtgaagaacggggacattctcctgctgaaccgacagcccaccctgcacaga
ccttccatccaggcccaccacgcccggatcctgccggaagagaaggtcctgcggctccac
tatgccaactgcaaggcctacaacgctgattttgatggagacgagatgaacgctcacttt
ccccagagtgagctgggccgggccgaggcctgcatcctggcttgcactgatcagcagtac
ctggttcccaaggatggccagccattagcaggcttgatccaagatcacatggtttcaggt
acaagcatgaccattcggggttgcttcttcacccgagaggaatatatggagctggtgtac
cgaggactcacagacaaagtggggcgtgtgaagatctttcctcctgccattctgaagccc
ttttgcctgtggacaggaaagcaggttgtgtctacactgctaataaacataatcccaaag
gaccacatcccactgaacttaacaggaaaggcgaaaatcggtggaaaagcctgggtgaag
gaacctccccgacctgttccaggctttaaccctgactctatgtgcgagtcccaggtgatc
atcagggaaggggagctgctgtgtggagtgctggacaaggcgcactacgggagctctgcc
tacggcctggtccactgctgctatgagatctacgggggtgagaccagtggcaaggttctc
acctgcctggcccgcctcttcactgcctacttgcagctctacagaggcttcaccttggac
gtagaagacattttggttaagccaaaggcagatgtcaagaggcacaggatcatcgaagag
tccacccactgtggggcccgggctgtcagggctgcattaaacctgccagaagctgcatcc
tgtgatgaaatccgagggaagtggcaggatgcccatctgggcaaagaccagagggatttt
aacatgattgatctgaagttcaaggaggaagtgaaccattacagcaatgagattaacaag
gcgtgcatgccgtttggcctgcacagacagtttcctgagaacaacttgcaaatgatggtg
cagtctggtgccaaaggctcaactgtaaacacgatgcagatctcctgcctactgggccag
attgaactggaaggtcggagacccccgctgatggcatctggcaagtcgctgccctgcttt
gagccgtatgaattcactcccagggctggcggcttcgtctccggcagattcctcaccggc
atcaggcctcctgagttcttctttcactgcatggccgggcgagaaggcctggtcgacact
gctgtgaagaccagccgctccggctacctccaaaggtgcattatcaagcacctggagggg
ctggtggtccagtatgacctgacagtccgcgacagcgacggcagcgtggtgcagttcctc
tatggggaggacggcctggacatccccaagacacagttcctgcagcccaggcagtttccc
ttccttgccagcaactgcgaggtgataatgaaatccaagcatgtccatgaagttttatcc
agagcagatccccagaaagctctccgccacttcagagccatcaaaaagtggcaaagcaag
catcccaacaccttgctgcgaaaaggtgccttcctgagttactcccagaaagtgcaggcg
gctgtgaaggccctgaacctcgaaggtggcaaccagaatggccgcagccccatgactcac
gagatgctgaggatgtggtatgagttagatgagcagagccgaaggaaataccagaagaag
gcagccccctgtcctgaccccagtctgtctgtctggcgcccagacatacactttgcgtca
gtgtcggaaacatttgaaaaaaaggttgacgcctacagttgcgagtgggcatcccgagca
gagaagagctatgagaaatcagagccttctctcgagaggttgaggaccctgctgcagttg
aagtggcagcgctcactctgtgacccgggcgaggccgtgggcctgctggctgcccagagc
atcggggaaccctccacacagatgaccctgaacaccttccacttcgctggcagaggcgag
atgaatgtcaccctgggcattccaaggttgagggagattctcatggtagccagcgccaac
atcaagacacccatgatgagcgtgcccgtgttcaacaccaagaaagcgctgaagagagtg
aagagcctgaaaaagcagcttaccagagtgtgcttaggggaggtgctacagaaaatagat
gtccaggagtcgttccgtatggaaacaaaacaagagaaatgccgggtgtaccagctgcga
tttcagttcctgccacatgcctgttaccagcaggagaagtgcctgagacccgaggacatc
ctgcgcttcatggagacgagattttttaaacttctgatggaatccatcagaaagaagaat
agtaaagcttcagctttcagaaatgtaaacactcgaagagctacccagcgtgatctagac
aacactggggaatcaaggaggaatcgggagcaggaagatgaggaggaggaggagcgcatt
gtggacgctgaagctgaggaaggggacgctgatgcctctgatgccaaacgcagggagaag
caagaggaggaggttgattatgagagcgaggaagaggaggagaaggaaggggaggagaat
gaggatgaggacatgcaagaggaaggaagcgtctctggtgaaggcaccgaggagcaggac
caagaggtgggccctggcccagaggaggacatgtccctgccacagccgcggaaagctgcc
cgtggccagggaccccagggagcggaggccgaggagcgccgtatccaggctgtgcgcgag
tcccacgcgttcattgaggactataagtacgacaccgaggagagcctgtggtgtgaggtg
acggtgaagctccctctgatgaagatcagctttgacatgagctccctggtggtgtccttg
gcccaaggcgctgttgtccatgcgaccaagggcatcacccgctgcctcctgaatgaaacg
accaacaagatgaacgagaaggagcttgtcttaaacacagaaggaatcaacctccccgag
ctgttcaagtatgctgaggttctggatctgcgccgcctctattccaacgacatccatgca
atggccaacacatatggcatagaggctgcactgcgggtgattgagaaggagatcaaggac
gtgtttgcagtgtatggcattgcagtcgaccctcgtcatctctccctggtcgccgattat
atgtgctttgagggtgtttacaagccgctgaaccgctttgggatccggtcaaactcctcc
cctctgcagcagatgacgtttgaaaccagcttccagtttctgaagcaagccaccatgatg
gggtcccacgatgagctgcggtccccttccgcctgcctggtggttgggaaagttgtcaag
ggtgggacaggcctgtttgaactcaagcagcccctgagatag
DBGET
integrated database retrieval system
