Loxodonta africana (African savanna elephant): 100655517
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Entry
100655517 CDS
T04351
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03082
ATP-dependent chromatin remodeling
lav04714
Thermogenesis
lav05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100655517 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100655517 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100655517 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lav03021
]
100655517 (SMARCC2)
03036 Chromosome and associated proteins [BR:
lav03036
]
100655517 (SMARCC2)
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100655517 (SMARCC2)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100655517 (SMARCC2)
PBAF complex
100655517 (SMARCC2)
GBAF(ncBAF) complex
100655517 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
100655517
NCBI-ProteinID:
XP_023395298
LinkDB
All DBs
Position
Unknown
AA seq
1254 aa
AA seq
DB search
MLDSVTSGEESTIFSAPDASRAPVEESGRWWTFYLRSFSFSFLLFPQYIQAEPPTNKSLS
SLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYD
FQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTED
KNNASHVVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPT
PEKPRKVHAKWILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRD
KKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVP
NVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNP
DLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMI
DTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSH
FHVLADTPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQML
NFPDKGKEKPADMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDD
WNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAF
LASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSG
IAGTTSDEPERIEESGTDEARAEGQATDEKKESKEPREGGGSAEEEAKEKTSEAPKKDEE
KGKEGDSEKESEKSDGDPVVDAEKEKEAKEGQEEVLKEVVESEGDRKTKVERDIGEGNLS
TAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREA
LEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPTLPPGSQPIPPTGAAG
PPSVHGLAVAPASVAPAPAGSGAPPGSMGPSEQIGQAGPTAGPQQQQPAGAPQPGAVPSG
VPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPAPSIIPFG
SLADSVSINLPPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLG
PGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgctagacagtgtaacatctggcgaggagagcactattttctcagctccagatgcttcc
agagcacctgtggaagaatctgggagatggtggaccttttatctaaggtcattttccttt
tctttccttctctttcctcagtatatacaagctgaaccacccaccaacaagtctctgtct
agcctggttgtacagttgctacaatttcaggaagaagtttttggcaaacatgtcagcaat
gcaccactcactaaactgccgatcaaatgtttcctagatttcaaagcaggaggttccctg
tgccacatacttgcagctgcctacaaattcaagagtgaccagggatggcggcgttacgat
ttccagaatccatcacgcatggaccgcaacgtggagatgttcatgaccattgagaagtcc
ttggtacagaataactgcctgtctcgacctaacatttttctgtgcccagaaattgagccc
aaactgctagggaaattaaaggacattatcaagagacaccagggaacagtcactgaggat
aagaacaatgcctctcatgttgtgtatcccgtcccagggaacctagaagaagaggaatgg
gtacgaccagtcatgaagagggataagcaggttcttctgcattggggctactatcctgac
agttatgacacatggatcccagctagtgaaattgaagcctctgtggaggatgccccaact
cctgagaaacctaggaaggttcatgccaagtggatcctggacacagacaccttcaatgag
tggatgaatgaggaagactatgaagtaaatgatgacaaaaaccctgtctcccgccgaaag
aagatttcagccaagacactgacagatgaggtgaacagcccagattcagatcgacgggac
aagaaggggggcaactataagaagaggaagcgctccccctctccttcacctacaccagaa
gctaagaagaaaaatgctaagaaaggcccttcaacaccttataccaagtcaaagcgtggc
cacagagaagaggagcaagaagacttgacaaaggacatggatgagccttcaccagtcccc
aacgtagaagaggtgacattgcccaaaacagtcaacacgaagaaggactcggagtcagcc
ccagtcaaaggaggcaccatgactgacctggatgaacaggaggatgaaagcatggagacc
acgggcaaggatgaggacgagaacagtacggggaacaaaggggagcagaccaagaatccg
gacctgcatgaggacaacgtgactgaacagacacaccacatcatcatccccagctatgct
gcctggtttgactacaatagcgttcatgctattgagcggagggctctccctgagttcttt
aacggcaagaacaagtccaagactccagagatctacctggcctatcgaaacttcatgatt
gacacttaccgactgaacccccaagaatacctcacctccactgcctgccgcaggaacctg
gcgggtgatgtctgtgccatcatgagggtccatgccttcctagaacagtggggtcttatt
aactaccaggtggatgctgagagccgaccaaccccaatggggcctccacccacgtctcac
ttccatgtcttggcggacacaccatcagggctggtgcctctgcagcccaagaccccgcag
ggccgccaggttgatgctgataccaaggctgggagaaagggcaaagagctggatgacctg
gtgccagagacggctaagggcaagccagagctgcagacctctgcttcccaacaaatgctc
aactttcctgataaaggcaaagagaaaccagcagacatgcagaactttgggctgcgcact
gacatgtacaccaagaagaatgttccctctaagagcaaggctgcagccagtgccactcgc
gagtggacagaacaggaaaccctgctactcttggaggcactggaaatgtacaaagacgac
tggaacaaagtatcagagcacgtgggaagccgcacgcaggacgagtgcatcttgcatttt
cttcgtcttcccattgaagacccgtacctggaggactcagaggcctccctggggcccctg
gcctaccagcccatccccttcagtcagtcgggcaaccctgtcatgagcactgtggccttc
ctggcctctgttgttgatcctcgagtcgcctctgctgccgcgaagtcagccctagaggag
ttctccaagatgaaggaagaggtgcccacagccctggtggaggcccatgttcgcaaagtg
gaagaagcagccaaagtgacaggcaaggcagacccagcctttggtctggaaagcagtggc
attgcaggaaccacctcagatgagcctgagcggattgaggagagcgggactgacgaggca
cgggcggagggccaggccacagatgagaagaaggagtccaaggaaccccgagaaggagga
gggtctgcagaggaagaagcaaaggagaagactagtgaggctcccaagaaggatgaagag
aaagggaaagaaggtgatagtgagaaggagtcagagaagagtgatggggatccagtagtg
gatgccgagaaggagaaggaggcaaaggaagggcaggaggaagtgcttaaggaagtagtg
gagtcagagggtgacaggaagacaaaagtggagcgggacattggtgagggcaacctctcc
accgctgcagccgctgccctagctgccgcagccgtcaaggccaagcacttggcagctgta
gaggagaggaagatcaaatctctggtggccctgctggtggagacccagatgaaaaagttg
gagatcaaacttcggcattttgaggagctggagacgatcatggaccgggagcgcgaagca
ctggagtatcagaggcagcagctcctagccgacagacaagccttccacatggagcagctg
aagtatgcagagatgagggcccggcagcagcacttccaacagatgcaccaacaacagcag
cagccacctcccaccctgcccccagggtcccagcctatcccacccacaggggccgctgga
ccaccctcggtccatggcttggctgtggctccagcctctgtggcccctgctcctgctggc
agtggggcccctcctggaagcatgggcccctctgaacagattgggcaggcggggccaact
gcagggccacagcagcagcagccagctggagccccccagcctggggcagtcccatcaggg
gtacccccccctggaccccatggcccctcaccgttccccaaccaacaaactcctccctca
atgatgccaggggcagtgccaggcagcgggcacccaggcgtggcgggtaatgctcctttg
ggtttgcctttcggcatgccgcctcctcctcctcctgctccatccatcatcccatttggt
agcctagccgactctgtcagtattaaccttccccctcctcctaacctgcatgggcatcac
catcatctcccattcgccccgggcactctccccccacctaacctgcctgtgtccatggcg
aaccctctacatcctaacctgccggcgaccaccaccatgccatcctccttgcctctcggg
ccggggctcggatccgccgcagcccagagccctgccattgtggcagctgttcagggcaac
ctcctgcccagtgccagcccactgccagacccaggcaccccgctgcctccagaccccacg
gccccaagcccaggcacagtcacccctgtgccacctccacagtga
DBGET
integrated database retrieval system
