Loxodonta africana (African savanna elephant): 100655571
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Entry
100655571 CDS
T04351
Symbol
SOX4
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-4
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100655571 (SOX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lav03000
]
100655571 (SOX4)
Transcription factors [BR:
lav03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100655571 (SOX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100655571
NCBI-ProteinID:
XP_010594487
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MVQQTNNAENTEALLAGXSSDSGAGLELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK
RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM
ADYPDYKYRPRKKVNSGNADSSSSAAASYXSVEIGDKVGGSGGGGHGGXCGGGSSNAGGG
GGGASGGGANSKPALKKSCGSKVAGGAGGGVSKPHAKLILTGGGGKAAAAASASFAAEQA
GAAALLPLGAAAADHHSLYKARTPSTSASTASSAAALAAPGKHLAEKKVKRVYLFGGLGA
SSSPVGGVGAGADPSDPLGLYEEGGAGSSPDGPSLSGRSSAASSPAAGRSPADHRSYASL
RAASPAPSSAPSHASSSASSHSSSSSSSSSGSSSSDDEFEDDLLDLNPSSNFESMSLGSF
SSSSALDRDLDFNFEPGSGSHFEFPDYCTPEVSEMISGDWLESSISNLVFTY
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaaaccaacaacgccgagaacacggaagcgctgctggccggttagagctcg
gactcgggcgccggcctcgagctgggcatcgcctcctcccccacgcccggctccaccgcc
tccacgggcggcaaggccgacgacccgagctggtgcaagacgcccagcgggcacatcaag
cggcccatgaacgccttcatggtgtggtcgcagatcgagcggcgcaagatcatggagcag
tcgcccgacatgcacaacgccgagatctccaagcggctgggcaaacgctggaagctgctc
aaagacagcgacaagatccctttcattcgggaggcggaacggctgcgcctcaagcacatg
gctgactaccccgactacaagtaccggcccagaaagaaggtgaattctggcaacgccgac
tccagctcctcggccgccgcctcctactagtctgtggagataggagacaaggtcggtggc
agcggcgggggcggccatgggggcnngtgcggtggcgggagcagcaacgcagggggagga
ggcggcggcgcgagcggcggcggcgccaactccaaaccggcgctgaaaaagagctgcggc
tccaaagtggcgggcggcgcgggcggcggggtcagcaaaccgcacgccaagctgatcctg
acgggcggcggcggcaaagcggcggccgccgcctccgcctccttcgcggccgagcaggct
ggggccgccgccctgctgcccctgggcgccgccgccgccgaccaccactcgctgtacaag
gcgcggactcccagcacctcggcctccacggcgtcctcggccgccgccctcgccgctccg
ggcaagcacctggcggagaagaaagtgaagcgcgtctacctgttcggcggcctgggcgcg
tcgtcgtcgcccgtcggcggcgtgggcgcgggtgccgaccccagcgaccctctgggcctg
tacgaggaggggggcgcgggctcgtcgccggacgggccgagcctcagcggccgcagtagc
gccgcctcgtcgcccgccgccggccgctcgcccgcggaccaccgcagctacgccagcctg
cgcgccgcctcgcccgccccgtccagcgcgccctcgcacgcgtcctcctcggcctcgtcg
cactcgtcgtcgtcctcgtcctcctcctcgggctcctcgtcctccgacgacgagttcgaa
gacgacctgctcgacctgaaccccagctcaaactttgagagcatgtccctgggcagtttc
agctcgtcgtcggcgctggaccgggacctggattttaacttcgaaccgggctccggctcg
cacttcgagttcccggactactgcacgcccgaggtgagcgagatgatctcgggagactgg
ctcgagtccagcatctccaacctggtcttcacctactga
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