Loxodonta africana (African savanna elephant): 100655797
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Entry
100655797 CDS
T04351
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lav03000
]
100655797 (SOX30)
Transcription factors [BR:
lav03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100655797 (SOX30)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100655797
NCBI-ProteinID:
XP_010590483
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All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MHPVQPRAVHVKAEKQEPGPGLEPSLGPRRVVEVGPRPSRVAKLEGPGSVVDSHRGDEKK
GKSEAEEVMRDAGKGGEGKSLATVREGVIKTEERLREGCRLGSEPASNGLIHGSKEVILA
QPAGGFGSHQQDLRLPLTLHTVLPGARIQFQGPPPSELIRLTKVPLTPVPIKMQSLLEPS
VKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNA
EISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSVSNVFS
GTTQSIISTNPTTIYPYRSPTYSVVIPSLQNTITHPVGEAPPAIQLPTPAVQRPSPITLF
QPSVSSTAQVATQPPSMPLHPTLPPQHFAGASQTDAHRLHSGASRSVKRPTPVSLESTSR
IPTSASTAHARFATSTIQPPKEYPSVSTCPRSAPIPQAPPIPHSHVYQPPPLGHPATLFG
TPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMPECLGYYEDRYQKHEAIFSA
LNRDYPFRDYPDERTHSEGSRSCESLDGTAYYNSHSHSGEEYLNPVPQLDIGVLENVFTA
PTSTPSSIQQVNVTDSDEEEEEKVLRNL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcacccggtgcagccccgagcggtgcacgtcaaggccgagaagcaggagcccggaccc
ggcttggaaccgtcgttggggcctcggagggtcgtcgaggtgggacccaggccttccaga
gtggccaaattggaaggccccgggtcggttgtcgacagccaccgaggggacgagaagaag
ggcaagtcggaggcggaggaggtcatgagggacgcggggaaaggcggtgaaggcaaaagt
ctggcgaccgtcagagaaggagtcatcaaaaccgaggagagactccgcgagggctgcagg
ctcggctcagagcccgcgtccaatggcttgatccatggcagcaaggaggtcatcctggcc
cagccggccggtggttttgggtcgcaccagcaagaccttaggctccctttgactctccac
accgtccttcctggggcccggatccagtttcagggacctccaccttcagaactgatacga
ttgaccaaggtccccctgacaccagtgcctattaaaatgcagtccttactggagccttct
gtaaaaattgaaaccaaagatgtcccactcaccgtgcttccctcagatgcaggaatacca
gatactcccttcagtaaggacagaaatggtcacgtgaagcgacccatgaatgcatttatg
gtttgggcaaggatccaccggccagcactagccaaagctaacccagcagccaacaatgca
gaaatcagtgtccagcttgggttagagtggaacaaacttagtgaagaacaaaagaaaccc
tattatgatgaagcacaaaagattaaagaaaagcacagagaggaatttcctggttgggtt
tatcagcctcgtccagggaagcgaaaacgcttccctctaagtgtttccaatgtattttct
ggtaccacacagagtatcatctctacaaatcccacaacaatttatccttatcgctcacct
acctactctgtggttattcccagcctacagaacaccatcactcatccagttggtgaagcc
ccacctgccatccagctgcccacacctgcagtccagcgcccaagccccatcacactcttc
cagcccagtgtctctagtactgcccaggtggccacccagcctccaagtatgcccctccat
ccaacacttccaccccaacactttgctggggcctcccaaacggacgctcatcggctgcat
tctggagccagtcgttctgtgaagagacccacccctgtctctctggagagtaccagcagg
attccaactagtgcaagtactgcccatgccagatttgcaacttcgaccatccaacctccc
aaggagtatcctagtgtttccacttgtcccagaagtgctccgatcccccaggctcctccc
attccacactcacatgtctaccagccccctcccttgggtcatccagccacactgtttggg
acaccaccgcggttctcttttcatcatccctacttcttacctggacctcactacttccca
tcaagcacgtgcccttatagtcggcctccttttggctatggaaattttccaagttcaatg
ccagaatgccttggttattatgaagacaggtaccaaaaacatgaggctatcttttcagct
ttaaatagagactatccttttagagactacccagatgaacgcacacacagtgaaggttct
cggagttgtgagagcctggatgggaccgcttactataatagtcatagccacagtggggaa
gaatacttaaatcccgtgcctcagctggacattggagtcctggagaatgtcttcacagcc
ccaacgtcaactccctctagcatccagcaagtcaatgtcactgacagtgatgaggaggaa
gaagaaaaagtgctcaggaatttataa
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