Loxodonta africana (African savanna elephant): 100655896
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Entry
100655896 CDS
T04351
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X3
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100655896 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100655896 (BARD1)
04121 Ubiquitin system [BR:
lav04121
]
100655896 (BARD1)
03036 Chromosome and associated proteins [BR:
lav03036
]
100655896 (BARD1)
03400 DNA repair and recombination proteins [BR:
lav03400
]
100655896 (BARD1)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100655896 (BARD1)
Ubiquitin system [BR:
lav04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
100655896 (BARD1)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100655896 (BARD1)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100655896 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_4
Ank_2
zf-RING_6
Ank_3
Ank_5
BRCT
BRCT_2
NIBRIN_BRCT_II
Motif
Other DBs
NCBI-GeneID:
100655896
NCBI-ProteinID:
XP_003405962
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MLRDRQPRVRSGNESRPAPNMEPAGLGVWAHSRAALDRLEKLLRCSRCGCVSDCIGTECP
VCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDNNLSDLKEDTHRTSIFSDAENKKKSIK
MWFSPRSKKVRYVVSKASVQTQPHMVNDDKAQQASMYEFVSASPPVDLSEKAKKASRKSE
KKQKKKTLAEINQKWNLETEKEGGEPASKEEFKEKLVSFCSQPSVIASPQLNGEIDLLAS
DPISESECFGSLSQISLPLAEQIVSPEIESRSEVVTPEEKPCESDLTSKKSLPFGSEGKH
GRRNRLSSPVSKSRRSSLQGTSKELVKHTVLSLPESLPDCSSPPSSKLKVGGTFGRKNSN
VSDDSISLSPSMSPSALNSPGYRRMLSSPLAMKLSPNSRMAVKRNHRGETLLHIASIKGD
VPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNSTGYQNDSPLHD
AAKNGHMDIVKLLLSYGASRNAVNIFGLRPVDYTDSEDMKSLLLLPEKNVSSASQCSVMN
TVQRSDRPLVLIGSGLSSEQQKMLSELAAILKAKKCAEFDSTVTHVVVPGDTVQSTLKCM
LGILNGCWVLKFEWVKACLQRKVYEQEEKYEIPEGPQRSRLNREQLLPKLFDGCYFYFGG
TFKHHPKDNLVKLVTAAGGQILSRKPKPDSDVTQTVNTVAYHARPDSDQRFCTQYIIYED
FSNYRPERVRQGKVWMAPSSWFIDCVISFELLPLDS
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcgatcggcagccgagagtgcgctccggtaacgagtctcgtcccgcgcccaac
atggagccggcggggctcggggtctgggcccacagccgtgcggcgctcgaccggctggag
aaactactgcgctgctcgcgctgtggttgcgttagtgactgcattgggaccgaatgtcca
gtgtgttatactccagcctggatacaagatgtgaagataaatagacagttggacagcatg
atccagctttgtagtaagcttcgaaatttgctgcatgacaataatctttcagatttgaaa
gaagatacacataggacaagtatattcagtgatgcagaaaacaagaagaaatcaataaaa
atgtggtttagtcctcgcagtaagaaggtcagatacgttgtgagtaaagcttcagtgcaa
acccagcctcacatggtaaatgatgacaaagctcagcaggcctcaatgtatgaatttgtt
tccgcaagtcctccggtagatttatcagagaaggctaaaaaggcttctagaaaatctgag
aaaaagcaaaaaaagaaaactttagctgaaatcaaccagaaatggaatttagagacagaa
aaagaaggtggtgaacctgcctccaaagaggaatttaaggaaaagctggtatccttctgc
agccaaccatctgttattgctagccctcaactaaatggtgaaatagacttactagcaagt
gaccctatatcagaatctgaatgtttcggaagcttaagtcaaatctctttaccattggct
gagcaaatagtgtctcccgaaattgagagcaggagtgaagtagtgactcctgaggagaag
ccctgtgaaagtgatctcacatctaagaaatccttgccattcggcagtgaaggaaaacat
gggcgtcgcaacagactttccagtcccgtttctaaaagtcgtagaagtagccttcagggc
actagtaaagagcttgtcaagcacacagtcctctcattgcctgagtcattgcctgactgt
tcttccccaccttcaagcaaacttaaagttggtggcacgttcgggagaaaaaatagtaat
gtgtcagatgactccattagcctttcaccaagtatgtcaccttctgcattgaatagtcca
ggttacagaagaatgttgtctagccccttggcaatgaagctatcacccaatagtcgtatg
gctgtgaaaagaaaccatagaggagagactttgcttcatattgcttctattaagggcgac
gtaccttctgttgaatacctcttacaaaatggaagtgacccaaatgttaaagaccatgct
ggatggacaccattgcatgaggcctgcaatcatgggcacctgaaggtagtggaattgttg
cttcagcacaaggcattggtaaacagcactgggtatcagaatgactcgccacttcacgac
gcggccaagaatgggcacatggacatagtcaagctcttactttcctatggagcctccagg
aacgctgttaacatatttggtctgcggcctgtggattatacagacagtgaagatatgaaa
tcgctgttgctgctaccagagaagaatgtatcatcagccagccagtgctcagttatgaac
actgtccaacgtagtgataggccccttgtgcttataggcagtggcctttcctcagaacaa
cagaaaatgctcagtgagcttgcagcaattcttaaggctaaaaaatgtgctgagtttgac
agtacagtaactcacgttgttgttcctggtgacactgttcaaagtaccctaaaatgtatg
cttgggattctcaatggatgctgggtcctaaaatttgaatgggtgaaagcatgtctgcaa
agaaaagtatatgaacaggaagaaaagtatgaaattcctgaaggtcctcagagaagcaga
ctcaacagagaacagctgttgccaaagctgttcgatgggtgctacttctactttggggga
accttcaagcaccatccgaaggacaacctagtgaagctggtcactgcagccggggggcag
atcctcagcagaaagccgaagccagacagcgacgtgactcagaccgtcaacaccgttgcg
taccacgccaggcctgactctgaccagcgcttctgcacgcagtatatcatctacgaggat
ttttctaattatcgcccagagagggttcggcagggcaaagtctggatggctccttccagc
tggtttatagactgtgtgatatcctttgagttgctccctcttgacagctga
DBGET
integrated database retrieval system
