Loxodonta africana (African savanna elephant): 100656026
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Entry
100656026 CDS
T04351
Symbol
SIN3A
Name
(RefSeq) LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04350
TGF-beta signaling pathway
lav04919
Thyroid hormone signaling pathway
lav05016
Huntington disease
lav05169
Epstein-Barr virus infection
lav05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100656026 (SIN3A)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100656026 (SIN3A)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100656026 (SIN3A)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100656026 (SIN3A)
09164 Neurodegenerative disease
05016 Huntington disease
100656026 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lav03036
]
100656026 (SIN3A)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
100656026 (SIN3A)
REST complex
100656026 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100656026 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
CPDase
Motif
Other DBs
NCBI-GeneID:
100656026
NCBI-ProteinID:
XP_010592065
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MKRRLDDQESPVYAAQQRRITGSTEAFPHQHRVLAPAPPVYEAVSDTMQSATGIQYSVTP
SYQVSAVPQSSSSHGPTIAAVHSSHHHPTAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHSSQPSAQSAPAPAQ
PAPQPPPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNEHGGTVKKAQLNNKPQKP
SQNGCQIRRHSGTGTTPPVKKKPKLLSLKDSSMADASKHGVGTESLFFDKVRKALRSAEA
YENFLRCLVIFNQEVISRSELVQLVSPFLGKFPELFNWFKNFLGYKESVHLETFPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVGPHLSL
VYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKSKLLFSNTAAQKLKGMDEVYNLFYVNNNWYIFMRLH
QILCLRLMRICSQAERQIEEENRERVWEHDMPGVRRDKSDSPAIQLRLKEPMDVEVEDYY
PAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLSENNNGATGGQLNTQTSRSLLESTYQRKAEQLMSDENCFKLMFIQSQDKVQLTI
ELLDTEEENSDDPVEAERWSDYVERYMNSDTTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKTMENVDSLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETSKWLMGEGLEGLVPCTTTCDTETLHFVSI
NKYRVKYGTVFKAP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacgtttggatgaccaggagtcaccagtatatgcggcccagcagcgtcggatc
actggcagcacagaggctttccctcaccagcaccgggtacttgcccctgcccctcccgtg
tatgaagccgtgtctgacaccatgcagtcagccacggggattcagtactctgtgacaccc
agctatcaggtttcagctgtgccacagagctccagtagtcacgggcccaccatagcagca
gttcacagcagccatcatcaccccacagctgtgcagccccacgggggccaggtggtccag
agtcatgctcatcctgccccaccagttgcaccagtgcaggggcagcagcagtttcagagg
ctcaaggtggaggatgcgctgtcctatcttgaccaggtgaagctgcagtttggtagtcag
cctcaggtctacaatgatttccttgacatcatgaaggaatttaaatctcagagcattgac
acaccgggagtgattagtcgggtgtcccagctgttcaaaggccaccctgacctgatcatg
ggcttcaacaccttcttgccccctggctacaaaattgaggtgcaaaccaatgacatggtg
aatgtcacaactcctggccaggttcatcagatccccacccatggcatccagccccagcct
caaccaccaccccagcattcttcccaaccttcagcccagtcagccccagctcctgcccag
cctgctcctcagcccccacctgccaaagtcagcaagccttcccaactacaagcacatact
ccagccagtcagcagactcccccgctcccaccatacgcatcaccacgttccccaccggtc
caacctcacacaccagtgacaatctccttgggaacggccccatccttgcagaacaatcag
cctgtggagtttaatcatgccattaactatgttaataagatcaagaacaggttccagggc
caaccagacatctacaaagcattcctggagattttgcacacgtatcagaaagagcagcga
aatgccaaggaagctggaggaaactacaccccagccttgactgagcaggaggtgtatgcc
caggtggctcggctctttaaaaatcaggaagatttgctgtcagagtttggacagtttcta
ccagatgccaacagctctgtgcttttaagcaaaacaaccgccgagaaggttgattctgtg
agaaatgaacatggaggcactgtgaagaaagcccaactgaacaacaagccacagaagcct
agccagaacggctgccagatccgccggcactcgggaacgggaactacccctccagtgaag
aagaaacccaaattgctcagcctaaaggattcctctatggcagatgccagcaagcatggt
gtaggaactgaatctttattttttgataaggtccgaaaagctttgcgaagtgcagaggct
tatgaaaatttcctgcgctgtcttgttatctttaaccaggaggtgatctctcgatctgag
ctagtacagctagtctctcccttcctagggaaattccctgagttgtttaattggtttaaa
aactttctgggctataaggagtctgtacatctggaaacctttccaaaggaacgagctacg
gagggcattgccatggagatagattatgcctcctgtaaacggttgggctccagctatcga
gccctcccaaagagctaccagcagcccaagtgcacaggacggactcctctctgtaaagag
gttttaaatgatacctgggtttccttcccttcatggtctgaggactctacctttgttagt
tccaagaagacacagtacgaagaacatatctatcgttgcgaagatgagcgctttgagctt
gatgtagttttagagaccaatctggcaacaatccgggttctggaagcaatacagaagaag
ctttcccgcttatctgctgaggaacaagccaaatttcgcttggacaacacccttgggggc
acgtcggaagtcatccatcgaaaagcactccagaggatatatgccgataaagcagctgac
atcatcgatggtctgaggaaaaacccctccattgccgtcccaattgtccttaaaaggttg
aagatgaaagaggaagagtggcgagaagctcagaggggctttaacaaggtgtggagggaa
caaaatgagaaatattatttgaagtctctggaccaccagggcatcaactttaaacagaac
gacaccaaggtcctgaggtctaagagcttactcaacgagattgaaagtatctatgacgag
aggcaagagcaggctacagaagagaatgctggtgtaccagttggcccccacctctcgctt
gtctatgaggacaaacagatactggaggatgccgctgccctgattatccaccatgtgaag
aggcagacaggcattcagaaggaggacaagtataaaatcaagcagatcatgcatcatttc
attccagacctgctctttgctcaaagaggcgatctctcagatgtggaggaagaagaagaa
gaagagatggatgtagatgaagccacaggggcagctaagaagcacaacggtgttgggggc
agcccccctaagtccaagctactgtttagtaacacagcagctcaaaagttaaaagggatg
gatgaagtgtacaatctcttctatgtcaataacaattggtatatctttatgcgactgcac
cagatcctctgcctgaggctgatgcggatttgttcccaagctgaacggcaaattgaagaa
gaaaaccgagagagagtgtgggagcatgatatgccaggcgtacggcgagacaagagtgac
agccccgctatccagctacgtctcaaagaacctatggatgttgaggtagaagattattac
ccagctttcctggacatggtgcggagcctgctggatggcaacatagactcatcacagtat
gaagattcgttgagagagatgttcaccattcacgcctacattgcttttaccatggacaaa
ctgatccagagcattgtcagacagctgcagcacatcgtgagtgatgagatctgtgtgcag
gtgactgacctttacctgtcagaaaacaataatggggccactggaggccagctgaacaca
cagacttcaaggagcctcctagagtcaacatatcagagaaaggcagagcagctcatgtca
gatgagaattgctttaagcttatgttcattcagagccaagacaaggttcagctgaccatt
gagcttctggacacggaagaggagaactcggatgaccccgtggaagcagagcgctggtca
gactacgtggagcgttacatgaattccgatactacctctcctgagctccgtgagcatctg
gcacagaaaccagtgtttctcccgaggaacctgcggcgcatccggaagtgccagcgtggt
cgagaacagcaggaaaaggaagggaaggaaggaaacagtaagaagaccatggagaatgtg
gatagcctggataagctggagtgtagattcaagctgaattcctacaagatggtatatgtg
atcaagtcggaggactacatgtatcggaggactgccttgctccgggctcatcagtcccat
gagcgggtaagcaagcggttacatcagaggttccaggcctgggtagataaatggaccaag
gagcacgtgccccgtgaaatggcagcagagaccagcaagtggctcatgggtgaggggctg
gagggcctggtgccctgtaccaccacctgtgacacagagaccctgcactttgtgagcatt
aacaagtaccgtgtcaaatacggcacagtattcaaagccccgtaa
DBGET
integrated database retrieval system
