Loxodonta africana (African savanna elephant): 100656028
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Entry
100656028 CDS
T04351
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lav03009
]
100656028 (DDX52)
Enzymes [BR:
lav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100656028 (DDX52)
Ribosome biogenesis [BR:
lav03009
]
Eukaryotic type
90S particles
Helicases
100656028 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100656028
NCBI-ProteinID:
XP_023409147
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MDVHDLFRRLGAGAKFDVNRFSTDAARFQLGKRKHDFNSSEVLQGLDFFGNKKSVPGEYG
TSRMHQELQGEEKEEESLIEGKRKQNKKKRKMMTPEITSPEEGATIQWISSVEAKIEDKK
VKGENKLTSGKLEHLRKEKVRKNVLSPESVCFSDLVIFSTVRGLFSWVQVVQVVLSVNTQ
RLLGVVVTVLGDGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELASQ
IHRELLKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDL
TSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLD
NVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFSPPVLVFVQSIERAKELF
HELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDF
PTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSIANVIQQAGCPVPEYIKGFKKLL
SKQKKKMIKKPLERESISTTPKYFLEKAKDKQEKVTGQNTKK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggatgtccacgatctttttcgccggcttggcgcgggggccaaattcgacgtgaatcgc
ttctcgacagatgcagcccgatttcagttaggaaaaaggaaacatgactttaattcttca
gaggtgctgcagggactggacttttttggaaacaagaagtctgtcccaggtgagtatggc
acatccagaatgcatcaagaactccaaggtgaagagaaagaagaagaaagcttaatcgaa
gggaagaggaaacagaacaagaaaaagagaaagatgatgactccagaaattacgtctcca
gaagaaggagctactatacagtggatatcatctgtggaagccaagattgaagataaaaaa
gttaaaggagaaaataaactaacttcaggcaagttggagcatctcagaaaggaaaaggtt
agaaaaaatgtcttaagcccagaaagtgtatgtttttctgacctagtgattttttccact
gtacgtgggttattctcttgggttcaggtagtacaagtggtcttaagtgtcaatacccag
agactccttggggtggtggtgacagtgctgggagatggtcgtgaacttctggcttctgct
cctactggatctggaaagactctggcttttagcattcccattttaatgcagctgaaacaa
cccacaaataaaggcttcagggctctgataatatcaccaacacgagaacttgccagccag
attcaccgagaactattaaaaatctctgagggaacagggttcaggatacacatgattcac
aaagcagcagtggcagccaaaaaatttggacctaaatcatctaagaagtttgatattctt
gtgactactccaaatcgactgatttatttattaaagcaagatcctccaggaatagaccta
acaagtgttgagtggctcgtggtagatgaatcagacaaactgtttgaagatggtaaaact
ggatttagagaccagctggcttccattttcctggcctgcacatcccacaaggtcagacga
gctatgttcagtgccacttttgcatacgatgttgaacagtggtgcaaactcaacttggac
aatgtcattactgtatccattggagcaaggaattctgcagtagagactgtagaacaagaa
cttctctttgttgggtctgagactggaaaacttctggccatgagagaacttgttaaaaag
ggtttcagtccacctgttcttgtttttgttcagtccattgaaagggctaaagaacttttt
catgagctcatatatgaaggtattaatgtggacgttattcacgcagagaggacacagcaa
cagagagataacaccgtgcatagcttcagagcggggaaaatctgggttcttatttgtaca
gccttgctggcaagagggattgactttaaaggcgtgaacttggtgatcaactatgacttt
ccaaccagttcagtggaatatatccacaggataggtcgaactggaagagcgggacataaa
ggaaaagctgttacatttttcactgaagatgataaaccattattaagaagtattgcgaat
gttatacagcaagccggatgtcctgtaccagaatacataaaaggtttcaaaaaactttta
agcaaacaaaagaaaaaaatgattaagaaaccattggaaagggagagtattagtacaact
ccaaagtacttcttagagaaagctaaggataaacaggaaaaggtcactggtcagaacacc
aagaagtag
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