Loxodonta africana (African savanna elephant): 100656075
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Entry
100656075 CDS
T04351
Symbol
ARID1B
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03082
ATP-dependent chromatin remodeling
lav04714
Thermogenesis
lav05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100656075 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100656075 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100656075 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lav03000
]
100656075 (ARID1B)
03021 Transcription machinery [BR:
lav03021
]
100656075 (ARID1B)
03036 Chromosome and associated proteins [BR:
lav03036
]
100656075 (ARID1B)
Transcription factors [BR:
lav03000
]
Eukaryotic type
Helix-turn-helix
ARID
100656075 (ARID1B)
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100656075 (ARID1B)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100656075 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
100656075
NCBI-ProteinID:
XP_023401156
LinkDB
All DBs
Position
Unknown
AA seq
1844 aa
AA seq
DB search
MSPGHPGQPMGRPQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPI
SIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYNQQPQPPHLPPQAQYLPSQ
SQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPVEVLASEDAAFGLK
DLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSP
VGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSVHPAMSQSPMPQERGFMAGSQRN
PQMSQYGPQQTGPSMSPHPSPGGQMHPGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPTY
SGVPSASYSGPGPGMGINANSQMHGQGPSQPCGAMPLGRMPSAGMQSRPFPGNMSSMTPS
SPGMPQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRPPYIRSPAYPSQSGAGGRP
MFSSQHPNYGNSQAPLLHQPDQYGQGSFPSMNQSGLMASSSPYNQPMNNSSGLMNTQAPP
YSMAPNMVNSSTASMGLADMMSPGESKLPLKTDGKEEGPPQPESKSKDSYSSQGISQPPT
PGNLPVPSPMSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKLYELGN
EPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWREL
ATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPAN
SGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSD
SSFPKRNSMTPNAPYQQGMSMPDMMGRVPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSG
MQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGL
YPQQPNYKRHMDGMYGPPAKRHEGDVYNMQYGGQQQEMYSQYGSSYSGPERRPLQGQYPY
PYNRERLQGPGQLQPHGLPPQMMGGPLQAASGDGPQQNMWAARNDMPYPYQNRQGPGGPA
QAPPYPGVSRTEEMMVPEQRINHESQWPSHVSQRQPYMPSSASMQPITRPPQSSYQTPPS
LPNHISRAPSPASFPRSLENRMSPSKSPFLPSMKMQKVMPSVPPSQVTGPPPQPPPIRRE
ITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDD
STVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHAAVRRDESQALA
DDPGREEEDAECLDDEDDEEDEEEEDSEKAETDDQSSMAFPSPDATAAPKEKPKQASRFD
KLPIKLVKKNSLFVVDRSDRLGRVQEFSSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRR
PPPPLSSAGRKREQEGKGDAEGQQEKSIVATIDDVLSARPGALPEDAHPGNQAESSKFPF
GIHQAKSHRNIRLLEDEPRSRDETPLCTVAHWQDSLAKRCICVSNIVRSLSFVPGNDAEM
SKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTL
VTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLET
LCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALA
ARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHSLMHLQTPPLEPPSVDMMCRAAKALLAM
ARVDENRSEFLLHEGRLLDISISAVLNSLVASVVCDVLFQIGQL
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atgagccccggccaccccggacagcccatgggccgaccccagggcagtccgatggatcca
atggtgatgaagaggccgcagttgtatgggatgggcagtaaccctcactcacagccccag
cagagcagcccctatcctggggggtcctacggccctcccggcccccagcggtatccgata
agcatccagggtcgtaccccaggggctatggcaggaatgcagtaccctcagcagcagatg
ccacctcagtatggacagcaaggtgtcagtggttactgccaacaaggccaacagccatat
tacaaccagcagccgcagcctccgcacctcccaccgcaggcccagtatctgccgtcccag
tcccagcagaggtaccagccgcagcaggacatgtctcaggaaggctatggaactaggtct
caacctcctctggctcccggaaaacctaaccatgaagacttgaacttaatacaacaagaa
agaccatcaagcttaccagttgaagtcttggcctcggaggatgcagcctttggactcaag
gacctgtctggctccattgatgacctccctacaggaaccgaagcaaccttgagctcggca
gttagtgcctccgggtccacgagcagccagggggatcagagcaacccagcgcagtcaccc
ttctccccgcacgcatccccgcacctctccagcatccccgggggcccatcaccttctccc
gtcggctctcctgtcgggagcaaccagtcaaggtctggcccaatctctcctgcgagtatt
ccaggcagtcagatgccgccgcagcctcccggcagccagtcagaatccagcgtccaccct
gccatgagccagtctccaatgccgcaggaaagaggttttatggcaggctcacaaagaaac
cctcagatgtcccagtatggacctcagcagacaggaccatccatgtcgccgcacccatct
cctgggggccagatgcatcctggaatcagtagctttcagcagagcaactcaagtgggact
tacggtccgcagatgagccagtatggaccacaaggtaactactccagaccccccacatat
agtggggtacccagtgcaagctacagcggcccagggcccggcatgggcatcaatgccaac
agccagatgcatggacaagggcccagccagccatgtggtgctatgccgctgggacggatg
ccatcggccgggatgcagagcagaccgtttcctggaaacatgagcagcatgacccccagc
tctcccggcatgccacagcagggagggccaggaatggggccgcccatgcccactgtgaac
cgtaaggcacaggaggcagccgcggcagtgatgcaggccgctgcaaactcagcacaaagc
aggccaccatacattaggtcgcctgcttatcccagccagtctggggctggcggacgcccc
atgttttcttcccagcaccccaactatggcaactctcaggctcccctgctgcaccagcct
gaccagtacgggcaaggcagttttcccagcatgaatcagagtggactgatggcttccagt
tctccctacaaccagccaatgaacaacagctcgggactgatgaacacccaggccccgccc
tacagcatggcacccaacatggtgaacagttccacagcatctatgggtcttgcagatatg
atgtctcctggtgagtccaaattgcccctcaaaaccgacggcaaagaagaaggtcccccg
cagcccgagagcaagtcaaaggatagctacagctctcagggtatttctcagcccccaacc
ccaggcaacctgccagtcccttccccaatgtcccccagctctgctagcatctcctcattt
catggagatgaaagtgatagcattagcagtccaggctggccaaagactccatcaagccct
aagtccagctcatctaccaccactggggagaagatcacaaagctgtatgagctggggaat
gagccagagagaaagctgtgggtggaccgatacctcaccttcatggaagagagaggctcc
cctgtgtccagtctgcctgcagtgggcaagaagcctttggatttgttccggctctacgta
tgcgtcaaagagatcggaggcttggcgcaggttaataaaaacaagaagtggcgcgagctg
gcaaccaacctcaatgttggcacctcgagcagtgcagccagctcgctgaagaagcagtac
atccagtacctgtttgccttcgagtgcaagatcgagagaggcgaggagccccctcccgaa
gtcttcagcacgggggacaccaaaaagcagcccaagctccagccgccctctcctgctaac
tcaggatccttgcaaggtccacagaccccgcaatcaactggcagcaactcgatggctgag
gttccaggtgatctgaagccaccgacgccagcctccaccccccacggacagatgaccccg
atgcaaggtggaagaagcagtacaatcagtgtgcacgaccccttctcagacgtgagcgac
tcgtcgttcccaaaacggaactccatgactccgaacgctccataccaacagggcatgagc
atgccagacatgatgggcagggtgccctatgagcccaacaaggacccctttggtggaatg
agaaaagtgcctgggagtagtgagcccttcatgacgcaaggacagatgcccaacagcggc
atgcaggacatgtataaccagagtccttctggagccatgtccaacctgggcatgggccag
cggcaacagtttccctacggagccagttacgaccggaggcatgaaccttacgggcagcag
tatccaggccaaggccctccctcaggacaacccccatatggaggccaccagcctggactg
tatccacagcagccgaattacaaacgccacatggacggcatgtacgggccgccggcgaag
cgccacgagggcgacgtctacaacatgcagtatggcggccagcagcaggagatgtacagc
cagtacggcagctcctactcggggcccgagcggaggcccctgcagggccagtacccgtac
ccctacaaccgggagcggctgcagggccccgggcagctgcagccgcacggcctcccgccg
cagatgatgggcggccccctgcaggcggcgtcgggcgacgggccccagcagaacatgtgg
gcggcgcgcaacgatatgccttatccctaccagaaccgccagggccccggcggccccgcg
caggcgcctccctaccccggcgtcagccgcacggaggagatgatggtaccggagcagagg
atcaatcacgagagccagtggccttcccacgtcagccagcgtcagccttacatgccgtct
tcagcctccatgcagcccatcacgcgaccgcctcagtcgtcctaccagacgcccccgtca
ctgccaaaccacatctccagggcgcccagcccggcgtccttcccgcgctccctcgagaac
cgcatgtcaccgagcaagtctcccttcctgccctcgatgaagatgcagaaggtcatgccc
tcggtccccccctcacaggtcacggggccaccgccccagccgccccccatccgaagggag
atcacttttcctcctggttcggtagaagcatcacagccagtcttgaaacaaaggcgaaag
attacctcaaaagacattgtaactcctgaggcatggcgtgtgatgatgtcccttaaatca
ggtctcttggctgaaagtacttgggctttggacactattaatattctcctctatgacgac
agcactgttgccaccttcaatctctctcagctgtctggatttctcgagcttttggtagag
tactttagaaaatgcctcatcgacatctttggaattctcatggaatatgaagtgggagac
cccagccaaaaagcccttgatcacgctgcagtgaggagggatgagagccaggccttggcc
gatgatcctgggagagaggaggaagatgctgaatgtctcgatgacgaggacgacgaggaa
gatgaggaagaggaggacagcgagaaggcagaaaccgacgaccagagcagcatggctttc
ccctctcccgacgccactgcggctccaaaggagaagcccaagcaagcgagcaggtttgac
aagctgcccataaagctggtcaagaagaacagcctgtttgtggtggaccgctccgacagg
ctgggccgcgtgcaggagttcagcagtggtctcctgcactggcagctgggcggcggggac
accaccgagcacatccagacgcacttcgagagcaagatggagattccgccccgcaggcgt
ccacctccccctctgagctcggcgggtagaaagagagagcaggaagggaaaggggatgct
gaggggcagcaggagaaaagcatcgtcgccaccattgatgacgtgctgtcagcccgtcca
ggggcactgcctgaggacgcccaccccgggaaccaggccgagagcagcaagtttcccttc
ggcatccatcaggccaagagccatcggaacatcaggctgctggaggacgagccccggagc
cgtgacgagacgcccctgtgcaccgtcgcgcattggcaggactctctggccaagcgctgc
atctgcgtgtccaacatcgtccggagtttgtcctttgtgcctggcaacgacgccgagatg
tccaaacatccgggcttggtgctgatcctggggaagctgatcctccttcaccacgaacac
cctgagaggaagcgagccccgcagacctatgagaaggaggaagatgaggacaagggggtg
gcctgcagcaaggatgagtggtggtgggactgcctcgaggtgctgagggacaacacactg
gtcacactggccaacatttccgggcagctagacttgtcggcttacacggaaagcatctgc
ttgccaatcttggatggcttgctgcactggatggtgtgcccgtccgcagaggcgcaagac
ccctttccgaccgtggggcccaactcggtcctgtcgcctcagagacttgtgctggagacc
ctctgtaaactcagcatccaggacaacaacgtggacctcatcctggccacgcccccattc
agtcgccaggagaaattctatgctacgttagttaggtacgttggggatcgcaagaaccca
gtctgtcgagaaatgtccatggcgcttctatcgaacctcgcccaaggggacgcgttagca
gccagggcgatagctgtgcagaagggaagcattggaaacttgataagcttcctggaggac
ggggtcacgatggcccagtaccagcagagccagcacagcctcatgcacttgcagaccccg
cccctggagccacctagcgtggacatgatgtgcagggcagccaaggcgttgctggccatg
gccagagtggacgaaaaccgctccgagttcctcttgcacgagggtcggttgctggatatc
tcgatatcagcggtcctgaactctctggttgcgtctgtcgtctgtgatgtactatttcag
attggtcagttatga
DBGET
integrated database retrieval system
