Loxodonta africana (African savanna elephant): 100656170
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Entry
100656170 CDS
T04351
Symbol
NCAM1
Name
(RefSeq) LOW QUALITY PROTEIN: neural cell adhesion molecule 1
KO
K06491
neural cell adhesion molecule
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
lav04514
Cell adhesion molecule (CAM) interaction
lav04517
IgSF CAM signaling
lav05020
Prion disease
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
100656170 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100656170 (NCAM1)
04517 IgSF CAM signaling
100656170 (NCAM1)
09160 Human Diseases
09164 Neurodegenerative disease
05020 Prion disease
100656170 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lav04131
]
100656170 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lav04515
]
100656170 (NCAM1)
04090 CD molecules [BR:
lav04090
]
100656170 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
lav00536
]
100656170 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lav00537
]
100656170 (NCAM1)
04091 Lectins [BR:
lav04091
]
100656170 (NCAM1)
Membrane trafficking [BR:
lav04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
100656170 (NCAM1)
Cell adhesion molecules [BR:
lav04515
]
Immunoglobulin superfamily
NCAM1/2
100656170 (NCAM1)
CD molecules [BR:
lav04090
]
Proteins
100656170 (NCAM1)
Glycosaminoglycan binding proteins [BR:
lav00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
100656170 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lav00537
]
Others
100656170 (NCAM1)
Lectins [BR:
lav04091
]
I-type lectins (Siglecs)
100656170 (NCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_5
Ig_4
Ig_6
C1-set
Ig_C17orf99
V-set_CD47
Adeno_E3_CR1
Collagen_bind_2
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
100656170
NCBI-ProteinID:
XP_023397395
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MCECAAEHTHREHWVSEKCERDVRVCSRAHPQGALGSLRSVSVMRECAAEHTHREHWVSE
KLSLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLTPNQQRISVVWNDD
SSSTLTIYNANIDDAGIYKCVVTGEDGSESEATVNVKIFQKLMFKNAPTPQEFREGEDAV
IVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILAR
GEINFKDIQVIVNVPPTVQARQNIVNATANLGQSVTLVCDAEGFPEPTMSWTKDGEQIED
EEDEKYIFSHDSSELTIRKVDKNDEAEYVCIAENKAGEQDASIHLKVFAKPKITTXRNQT
AMKLEEQVTLTCEASGDPIPSITWRTSTRNISSEEKTLDGHMVVRSHARVSSLTLKSIQY
TDAGEYICTASNTIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQVNITCEVFAYPSATIS
WFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQA
DTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWKAVGEEVWHFEWYDAREANM
EGIVTIMGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGEDGNSI
KVNLIKQDDGGSPIRHYLVKYRALSSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAEN
QQGKSKAAHFVFRTSAQPTVIPANGSPTSGLSTGAIVGILIVTFVLLLVVVDITCYFLNK
CGLLMCIAVNLCGKAGPGAKGKDMEEGKAAFSKDESKEPIVEVRTEEERTPNHDGGKHTE
PNETTPLTEPELPADTTATVEDMLPSVTTVTTNSDTITETFATAQNSPTSETTTLTSSIA
PPATAMPDSNSVPGQAAPSKGPGVSASSPPPASAPKVAPLVDLSDTPASAPATSNLSSSV
LANQGAVLSPSTLASVGEAPKAPPVSKPASSPAPAPAGAASPLAAAAATATEAPQGKQET
PSTKGEDPEPTQPGRAKSPAEAALASPKSEAVSISVTNPSQGEDFKMDEGNFKTPDIDLA
KDVFEALGSPAPAARASGQAPELAPSTADSSVSPAPAKTEKGPVEAKSECQETEAKPAPP
AEVKTVPNDATQTKENESKA
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagtgtgcagcagagcacacccacagggagcactgggtctctgagaagtgtgag
cgtgatgtgcgagtgtgcagcagagcacacccacagggagcactggggtctctgagaagt
gtgagcgtgatgcgtgagtgtgcagcagagcacacccacagggagcactgggtctctgag
aagttgtctctgcaggtggatatcgttcccagccaaggggaaatcagcgttggagagtcc
aaattcttcctgtgccaagtggcaggggatgctaaagataaagacatctcctggttctcc
cctaatggagaaaagctcaccccgaaccagcagcggatctcagtggtgtggaacgatgat
tcttcctccaccctcaccatctacaacgccaacatcgacgacgctggcatttacaagtgt
gtggtcactggtgaggatggcagtgagtcggaggccacggtcaatgtgaagatcttccag
aagctcatgttcaagaatgctccaaccccacaggagttcagggagggggaagatgctgtg
attgtgtgtgatgtggtcagctccctccccccaaccatcatctggaagcacaaaggccga
gatgtcatcctgaaaaaagatgtccgatttatagtcctgtccaacaactacctgcagatc
cggggcatcaagaaaacagatgagggcacttaccgatgtgagggcagaatcctggctcgg
ggggagatcaacttcaaggacattcaagtcattgtgaatgtgccacccaccgtccaagcc
aggcagaacatagtaaatgccaccgccaaccttggccagtcggttaccctggtgtgcgat
gctgaaggcttcccagagcccactatgagctggacaaaggatggggagcagatagaagat
gaggaagatgagaagtacatcttcagccatgacagctctgagctgaccatcaggaaagtg
gataagaacgatgaggccgagtatgtctgcattgcggagaacaaggccggcgagcaggac
gcgtccatccacctcaaagtctttgcaaaacccaaaatcactacgtagagaaaccagact
gccatgaagctggaagaacaggttactcttacctgtgaagcctcgggagaccccattccg
tctatcacctggagaacttccacccggaacatcagcagtgaagaaaagaccctggatggg
cacatggtggtgcgcagccatgcccgcgtgtcctccctgaccctgaaaagcatccagtac
acagatgctggagagtacatctgcactgccagcaacaccatcggccaggattcccagtcc
atgtatcttgaagtgcaatatgcccccaagctacagggccctgtggctgtgtacacttgg
gaggggaaccaggtgaacatcacctgcgaggtgtttgcctatcccagtgccacaatctca
tggttccgagatggtcagctgctaccaagctccaactacagtaatatcaagatctacaat
acaccgtcagccagctatctggaggtgaccccggactctgaaaatgactttggaaactac
aactgcactgcagtgaatcgcattggacaggagtccttggaattcatccttgttcaagca
gacactccatcctcaccatccattgaccaggtggaaccatactctagcacagcccaggtg
cagtttgatgaaccagaggccacaggtggggtgcccatcctcaagtacaaggctgagtgg
aaagcagtgggcgaggaagtgtggcatttcgagtggtatgatgccagagaagccaacatg
gagggcattgtcaccatcatgggtctgaagccagagacgacgtatgctgtacggttggca
gccctcaatggcaaggggctgggcgagatcagcgcggcctccgagttcaagacgcagcca
gtccgagaacccagtgcaccgaaacttgagggccagatgggagaggatggaaactctatt
aaggtgaacctgatcaagcaggacgatggtggctcccccatcagacactacctggtcaag
taccgcgcgctctcctcagagtggaaaccagagatcaggctcccctctggcagtgaccac
gtcatgcttaagtccctggactggaatgcagagtatgaggtctatgtggtggctgagaac
cagcagggaaagtccaaggcggctcattttgtgttcaggacctcggcccagcccaccgtc
atcccagccaacggcagccccacctcaggcctgagcactggggccatcgtgggcatcctt
attgtcacctttgtactgctcttggtggttgtggacatcacctgctacttcctgaacaag
tgtggcctgctcatgtgcatcgctgtcaacctgtgtgggaaagccgggcccggggccaag
ggcaaggacatggaggagggcaaagctgccttctcgaaagatgagtccaaggagcccatt
gtggaggtgcgaactgaggaggagcggaccccaaaccatgatggagggaaacacacagaa
cccaacgagaccacaccgctgacggagcccgagctgcctgctgacaccacagccactgtt
gaggacatgctgccttctgtcaccaccgttaccactaactctgacactatcaccgaaacc
tttgctactgctcagaacagccccaccagtgagaccacaaccctcacttccagtattgcc
cctccagccacggccatgcctgactcaaactctgtgccgggccaggccgccccctccaag
gggcctggtgtctcggcctcctccccacccccagcttcggcccccaaggttgcccccctc
gttgacctgagcgacaccccggcctcagctcctgccactagcaatttgtcttctagtgtc
ctggccaaccagggggctgtcctcagccccagcactcttgccagtgtgggtgaggccccc
aaggcccctcctgtgagcaagccagcctccagcccagcccccgccccagctggggcagct
agccccctagcagcagcagctgccactgccacagaagccccccaaggcaagcaggagact
cccagcaccaaaggcgaggacccggaacccacccagcctggccgtgcgaagagcccggcc
gaggcagccctggctagcccgaagagcgaggctgtctccatcagcgtcacaaacccttcc
cagggcgaggactttaaaatggacgaagggaacttcaagaccccagatattgaccttgca
aaggatgtttttgaagccctgggttctcctgctcccgccgccagggccagtggacaagcc
cctgagcttgctccttccactgcagacagctctgtctcgcctgcaccagccaagaccgag
aagggccctgtagaagcaaagtcggagtgccaagagacagaagcgaagccagcgccgcca
gctgaagtcaagacggtccccaacgatgccacacagacaaaggagaacgagagcaaagca
tga
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integrated database retrieval system
