Loxodonta africana (African savanna elephant): 100656237
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Entry
100656237 CDS
T04351
Symbol
GRIN2C
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04020
Calcium signaling pathway
lav04024
cAMP signaling pathway
lav04080
Neuroactive ligand-receptor interaction
lav04082
Neuroactive ligand signaling
lav04713
Circadian entrainment
lav04720
Long-term potentiation
lav04724
Glutamatergic synapse
lav05010
Alzheimer disease
lav05014
Amyotrophic lateral sclerosis
lav05017
Spinocerebellar ataxia
lav05020
Prion disease
lav05022
Pathways of neurodegeneration - multiple diseases
lav05030
Cocaine addiction
lav05031
Amphetamine addiction
lav05033
Nicotine addiction
lav05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100656237 (GRIN2C)
04024 cAMP signaling pathway
100656237 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100656237 (GRIN2C)
04082 Neuroactive ligand signaling
100656237 (GRIN2C)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100656237 (GRIN2C)
04720 Long-term potentiation
100656237 (GRIN2C)
09159 Environmental adaptation
04713 Circadian entrainment
100656237 (GRIN2C)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100656237 (GRIN2C)
05014 Amyotrophic lateral sclerosis
100656237 (GRIN2C)
05017 Spinocerebellar ataxia
100656237 (GRIN2C)
05020 Prion disease
100656237 (GRIN2C)
05022 Pathways of neurodegeneration - multiple diseases
100656237 (GRIN2C)
09165 Substance dependence
05030 Cocaine addiction
100656237 (GRIN2C)
05031 Amphetamine addiction
100656237 (GRIN2C)
05033 Nicotine addiction
100656237 (GRIN2C)
05034 Alcoholism
100656237 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lav04040
]
100656237 (GRIN2C)
Ion channels [BR:
lav04040
]
Ligand-gated channels
Glutamate (ionotropic)
100656237 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
AliA_AliB
Motif
Other DBs
NCBI-GeneID:
100656237
NCBI-ProteinID:
XP_023412507
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MYLSTRLAFSLCLPGTEHRSMSFKRFDLSSQACSSAVEWRVVRAPSRLALLPSPCPSGIS
WGHSANLSVSSSLSVSVSLSLPFSSPLLSLPSSGCVSSDTGLCLLSVHLPLSVPVSLVVP
ALFSPKDPPVDMGGALGLALLLTSILGAWSGLGPGQGQQAVTVAVVFGSSGPPQAQARAH
FTPQSFLDLPLEIQPSRGGVNNTDPTASSPDLWLLGAARVHGIDFEEKRGARWGQIFDFL
SSQTHWGGRGRGRGTGHPASLPPPRHLLNVTWEGRDFSFSPGGYLVQPTMVVIALNRHRL
WEMVXXWEHGVLHMKYPVWPXYSASLQPVVDSRHLTVATLEERPFVIVESPDSGTGGCVP
NTVPCRRQNNHTFSGDAAPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRG
VWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLE
PYSPSVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLASGKKSGGPSFTIGKSVWLLWAL
VFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKKVL
EPXYPPFRFGTVPIGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKMGKLDAFIYDAA
VLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRPLDLALLQFLGDGETQKLET
VWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVYWKLRHSMPHTS
QLDFLLAFSRGIYSLLQRACRSLARPRAGGPARSSRPGLAQANVLKMLRPARNMVTTAGV
GSSLDRATRTIENWANRRAPPTPAAHSPTPRPPPEPSPKAWGPSGGGCAVLVHRTQQPPV
RPPTPAPSLPNDPRTLGRPAWDTRRLARAGRGRWHLSSSERRAPPESPLSPARCSYNSFP
RGDRAGRPFLPLFPEPPEPENLPLLGREQLARREALLHAAWARSPRPRHASLPSSVAAAF
ARPRSQSAACAGPTCACRDARLAWRLPAPSLRLPSYREACRGGMREGTPTWPHGQHACLH
AHAHLPLCWGAVCSHRPHCARHGPWFPGAWGPQGHGGRTVGLSTGYRDSGGLDEVSSVAC
EMHGLSSPCTWRRFSSLESEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaagtaccaggctagcgttttcactgtgtcttcctgggacagaacacagatca
atgagtttcaaaaggtttgacctttctagccaagcatgcagttcagcagtagaatggagg
gtggtgcgtgccccatcacggcttgctcttctccccagcccctgcccctctgggatatcc
tggggacactcagctaacctctctgtctcttcctctttgtctgtgtctgtctccctctct
ctccccttctcttcccctcttctctcccttccatcctctgggtgtgtgtcctctgatact
ggcctttgtctcctgtctgtccatctgcctctctctgtgcctgtctccctcgtcgtacct
gccttgttctctccaaaggaccctccagtggacatgggtggggccctgggtctggctctg
ctgctcacctcaatcctgggtgcctggtcagggctgggcccaggtcagggccaacaggct
gtgacggtggctgtggtgtttggcagctcagggccaccccaggcccaggctcgtgcccac
ttcaccccccagagcttcctggacctgcccctggagatccagccctcacgagggggggtc
aacaacaccgaccccacagcctcctcaccagatctgtggctcctgggcgctgcccgcgtc
cacgggatcgactttgaggagaagagaggcgcgaggtggggccagatcttcgacttcctc
tcctcccagacccactggggaggcagaggcagggggcggggcactggacaccctgcttct
ctccctcctcccaggcatctgctgaatgtcacctgggagggccgagacttctccttcagc
cctggtgggtacctggtccagcccaccatggttgtgatagctctcaaccggcaccgcctc
tgggagatggtnnnnnnctgggagcatggcgtcctgcacatgaagtacccagtgtggcct
tgatacagtgcctctctgcagcccgtggtggacagccggcacctgacagtggccacgctg
gaagagcggccctttgtcattgtggagagccccgactctggcaccggcggctgcgtgccc
aacaccgtgccctgccgcagacagaacaatcacaccttcagtggagatgcagccccctac
accaagctgtgctgtaagggcttctgcatcgacatcctcaagaagctggccaaggtggtc
aagttctcctacgacctgtacctggtgaccaatggcaagcatggaaagagggtgcgcggc
gtgtggaacggcatgattggggaggtgtactacaagcgggcagacatggccatcggctcc
ctcaccatcaatgaggagcgctcggagatcgtggacttctctgtgcccttcgtggagacg
ggcatcagcgtcatggtggctcgcagcaatggcactgtctccccctcagccttcctggag
ccctacagcccctcggtgtgggtgatgatgttcgtcatgtgcctcaccgtggtggccatc
accgtcttcatgttcgagtacttcagccccgtcagctacaaccagaaccttgccagcggg
aagaagtctgggggcccatctttcaccattggcaagtccgtgtggctactgtgggcgctg
gtcttcaacaactcggtgcccatcgagaatccccggggcaccaccagcaaaatcatggtc
ctggtctgggccttctttgccgtcatcttcctcgccagctacactgccaacctggctgcc
ttcatgatccaagagcagtacattgacactgtgtctggtctcagtgacaagaaggttctg
gagccatagtacccgcccttccgctttggcaccgtgcccattggcagcaccgagcggaac
atccgcagcaactaccgtgacatgcacacccacatggtcaagttcaaccagcgctcggtg
gaggacgcactcacaagcctcaagatggggaagctggatgccttcatctacgacgccgct
gtcctcaactacatggcaggcaaggatgaaggctgcaagctggtcaccattgggtctggc
aaggtctttgccaccactggctacggcatcgccatgcagaaggactcccattggaagcgg
cccctagacctggcactcctgcagttcctgggtgacggggagacacagaagctggagacg
gtgtggctctcagggatctgccagaatgagaagaatgaggtgatgagcagcaagctggac
atcgacaacatggcgggtgtcttctacatgctgctcgtggccatggggctggccctgctg
gtctttgcctgggagcacctggtgtactggaagctgcgacattcaatgccccacacgtcc
cagctggacttcctgctggctttcagtaggggcatctacagtttgcttcagcgggcgtgc
aggagcctggccaggccccgggcgggcggcccagcccggagctcacggccgggtctggcc
caggccaacgtgctcaagatgctgcggccggcgcgcaacatggtgacaacggctggcgtg
ggcagctccctggaccgcgccacgcgcaccatcgagaactgggccaaccgtcgcgcgccc
ccgacgcccgccgcgcactctccgaccccccgcccgccccctgagcccagtcccaaggcc
tgggggccgtccggtggcggctgcgcagtcctggtgcaccggacccagcagccaccagtt
cgccccccgacgcccgcgccgtctctgcccaacgacccccggacgcttgggcggccggcc
tgggacacccggcggctagcgcgggccgggcgcggcaggtggcacctctcgtcctccgag
cggcgcgcaccgccggagagccccctgtcccctgcgcgctgttcctacaactccttcccg
cgaggcgaccgggcggggcgccccttcctcccgctcttcccggagcctccggagcccgag
aacttgccgctgcttgggcgggagcagctggcccggcgggaggctctgttgcacgcggcc
tgggcccgcagtccccgtccgcgccacgcctccctgcccagttcggtggcggcagccttc
gctcggcccaggtcgcaatctgccgcgtgcgcaggtcctacctgcgcctgccgtgacgcc
cgcctggcctggaggctcccggcgccgtcgctccggctgccgtcctaccgcgaggcgtgc
cgggggggcatgcgggaagggacccccacctggccgcacggacagcacgcctgcctccac
gcccatgcccacctaccgctctgttggggcgctgtctgctctcatcgcccacactgtgcc
agacatggcccgtggttccctggagcctgggggcctcaggggcacgggggcaggaccgtg
gggctgagcacaggctacagggacagtggggggctggatgaggtcagcagtgtggcctgt
gaaatgcatggcctttcaagcccttgcacatggaggcggttctccagcctggagtcggaa
gtgtga
DBGET
integrated database retrieval system
