Loxodonta africana (African savanna elephant): 100656435
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Entry
100656435 CDS
T04351
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100656435 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100656435 (DDX6)
03036 Chromosome and associated proteins [BR:
lav03036
]
100656435 (DDX6)
Enzymes [BR:
lav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100656435 (DDX6)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100656435 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
100656435 (DDX6)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100656435 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
100656435
NCBI-ProteinID:
XP_003418301
UniProt:
G3T6P6
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNTNTVNNGTQQQAQ
SLTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPAED
EKA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctgtccagtcaaaatggtcag
ctgaggggccctgtgaagcccagtggtggccccggaggagggggaacacagacacagcaa
cagatgaaccagctgaaaaacaccaacacagtcaataatggcactcaacagcaagcacag
agtttgaccaccactattaaacctggtgatgactggaaaaagactttaaaactccctcca
aaggatctaagaatcaaaacttcggatgtgacctccacaaaaggaaatgagtttgaagat
tactgtttgaaacgggagttactgatgggaatttttgaaatgggctgggaaaagccatct
cctattcaggaggagagcattcccattgctttatctggtagggatatcttagctagagca
aaaaatggaacaggcaagagcggtgcctacctcattcccttacttgaacggctagacctg
aagaaggacaatatacaagcaatggtgattgttcccactagagaacttgctctacaggtc
agtcaaatttgcatccaggtcagcaaacacatgggaggggccaaagtgatggcaactaca
ggaggaaccaatttacgggatgacataatgaggcttgatgacacagtgcatgtggtgata
gctacccctgggagaatcttggatcttatcaagaaaggagtagccaaggttgatcacgtc
cagatgatagtattggatgaggctgataagttgctgtcacaggattttgtacagataatg
gaggacattattctcacgctacctaaaaacaggcagattttactctattctgctactttc
cctcttagtgtacagaagttcatgaattcccatttgcaaaaaccctatgagattaacctg
atggaggaactaactctgaagggagtaacccagtactacgcatatgtgactgagcgccaa
aaagtacactgcctcaacacacttttctccaggcttcagataaaccagtcgatcattttc
tgcaactcctctcagagagttgaattgctggccaagaagatttcccagctgggttactct
tgcttctacatccacgctaagatgaggcaggagcatcgaaatcgtgtatttcatgatttc
cgaaacggcttatgccgaaatcttgtttgcactgatctgtttacccgaggtattgatata
caagctgtgaatgtggtgataaactttgacttcccaaagctggcagagacctatctccat
cgtattggaagatcaggtcgctttggtcaccttggcttagccatcaacttgatcacgtat
gatgatcgcttcaacctgaaaagtattgaggagcagctggggacagaaattaaacctatc
ccaagcaacatagataagagcctgtacgtggcagaataccacagcgagcctgcagaagat
gagaaagcttaa
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