Loxodonta africana (African savanna elephant): 100656584
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Entry
100656584 CDS
T04351
Symbol
TNR
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04151
PI3K-Akt signaling pathway
lav04510
Focal adhesion
lav04512
ECM-receptor interaction
lav04518
Integrin signaling
lav05165
Human papillomavirus infection
lav05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100656584 (TNR)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100656584 (TNR)
04518 Integrin signaling
100656584 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100656584 (TNR)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100656584 (TNR)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100656584 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lav00536
]
100656584 (TNR)
Glycosaminoglycan binding proteins [BR:
lav00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100656584 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
EGF_2
Pur_ac_phosph_N
Fn3_VIN3
FN3_Tor_3rd
DUF7949
Motif
Other DBs
NCBI-GeneID:
100656584
NCBI-ProteinID:
XP_003410929
UniProt:
G3TFC6
LinkDB
All DBs
Position
Unknown
AA seq
1358 aa
AA seq
DB search
MGADGETMVLKNMLIGVNLILLGSILKPSECQLEVTTERVQRQAVEEEGSMANYNTSSKE
QPMVFNHVYNINVPLDSLCYSGLEASAEQEVNAEDEALAEYTGQTSDHESQVTFTHRINL
PKKVCPCAGSTQVLQELLSRIEMLEREVSVLRDQCNANCCQESTATGQLDYIPHCSGHGN
FSLESCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCS
SRGLCVDGECVCEEAYTGEDCSQLRCPGDCSGKGRCANGTCLCQEGYVGEDCGQRRCLNA
CSGRGHCQEGLCFCEEGYQGPDCSTVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ
PMTRGGLQLQQRVPGDWSGVTIKELEPGLTYNISVYAVISNILSLPITAKVATHLSRPQG
LQFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
TVNVVALKDQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGL
VGGEGEKTTFRLQPPLSQYSVQALRPGSPYEVSVSAVRGTNESDPTTTQFTTEIDAPKNL
RVGSRTATSLDLEWDNSEAEVQEYKVVYSTLAGEQYHELLIPKSIGPTTRATLTDLVPGT
EYGIGISAIMNSQQSIPATMNARTELDSPRDLMVTASSETSISLIWTKANGPIDHYRITF
TPSSGIASEITVPKDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMLEVSLDATKRHAVLMGLQPATEY
IVNLMAVHGTVTSEPIVGSITTGIDPPKDITISNVTKDSLMVSWSPPVASFDYYRVSYRP
TKVGRLDSSVVPNTVTEFTITRLYPATEYEISLNSVRGREESERICTLVHTAMDNPVDLI
ATNITPTEALLQWKAPAGEVENYVIVLTHFAVAGETILVDGVNEEFQLVDLLPCTHYTVT
MYATSGPLTSGTVSTNFSTLLDPPGNLTASEVTRQSVLISWQPPRAEIENYVLTYKSTDG
SRKELIVDAEDTWIRLEGLSENTDYTVLLQAARDATRSSITSTAFTTGGRVFPHPQDCAQ
HLMNGDTLSGVYTIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRAG
FGNLEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAFASYDKFSVEDSRSLYKLRIGSY
NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYNHRVMVGRKRRSLQF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggacggggaaaccatggtcctgaagaacatgctcattggtgtcaacctgatc
cttctgggctccatcctcaagccatcagaatgtcagctggaagtcaccacggaaagggtc
cagagacaggcggtggaggaagaaggcagcatggccaactataacacatccagcaaagag
cagcctatggttttcaaccacgtgtacaacattaacgtgcccctggacagcctctgctac
tcggggctagaggcctctgctgagcaggaggtgaatgccgaagatgaggctctggctgag
tacacaggccagacatcagaccatgagagccaggtcaccttcacccacaggatcaacctc
cccaaaaaggtctgcccatgtgccggctcaacccaggtattgcaggagctgttgagccga
attgagatgctggagagggaggtgtcagtgctgcgggaccagtgcaacgccaactgctgc
caagaaagcactgccacaggacaactggactatattcctcactgcagtggccacggtaac
tttagcctcgagtcctgtggctgcatctgcaacgaaggctggtttggcaagaactgctca
gagccctactgccccctgggctgctccagccggggtgtgtgtgtggatggccagtgcatc
tgtgacagtgaatacagcggagatgattgctctgagctccgctgcccaacggactgcagc
tcccgggggctttgtgtggacggggagtgtgtctgtgaagaggcctacacaggcgaggac
tgcagccagctgagatgccccggggactgctcggggaaggggagatgtgccaacggtacc
tgcttatgccaggagggctatgttggtgaggactgcggccagaggcggtgtctgaatgcc
tgcagtgggcgaggacactgccaggaggggctctgcttctgtgaagagggctaccaaggc
cctgactgctccacagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgatgacccgggggggcctccagctccagcagcgggtgcctggagattggagtggtgtc
accatcaaggagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc
aacatcctcagccttcccatcactgccaaggtggccacccatctttccaggcctcaaggg
ctgcaattcaagaccatcacagaaaccaccgtggaggtgcagtgggagcccttctcattc
tccttcgatgggtgggagatcagcttcattccaaagaacaatgaaggaggggtgattgct
cagctccccagtgatgttacatccttcaaccagacgggactgaaacctggggaggaatac
actgtcaatgtagtggctttgaaagaccaggcccggagcccccctacctcagccagtgtc
tccacagtcattgatgggcccacgcagatcctggttcgagatgtctccgacaccgtggct
tttgtggagtggaccccacctcgagccaaagtcgattttattctcttgaaatatggcttg
gtgggtggggaaggtgagaagaccaccttccggctgcaaccccctctcagccaatattca
gtacaggccctgcggcccggttctccctatgaggtgtcggtcagtgcagtccgagggacc
aacgagagtgatcccacaaccacccagtttacaacagagattgatgcccctaagaacttg
cgtgttggttctcgcacggcaaccagccttgacctcgagtgggacaacagtgaggcagaa
gtccaggagtacaaggttgtgtacagcaccctggcgggtgagcagtaccatgagctcctg
atccccaagagcattggtcccaccaccagagccaccctcacagatctggtgcctggcact
gagtatgggattggaatatctgccatcatgaactcacaacagagcataccagccaccatg
aatgccaggactgaacttgacagtccccgagacctcatggtgacagcctcctcagagacc
tccatttccctcatctggaccaaggccaatggccccattgatcactaccgaattactttt
accccttcttctgggatcgcttccgaaatcactgtgcccaaggacaggacctcatacaca
ctgacagacctagagcctggggcagagtacatcatatcgatcaccgccgagaggggtcgg
cagcagagcttggagtccacagtggatgccttcacaggcttccggcccatctcccatttg
cacttttctcatgtgacctcctccagcgtgaacatcacctggagtgacccatcccctcca
gcagatagactcattctgaactacagcccccgggacgaagaggaagagatgctggaggtc
tccctggatgccaccaagaggcatgctgtcctgatgggcctgcagccagccaccgagtac
atcgtgaacctgatggctgtccatggcacagtgacttctgagcccattgtgggctccatc
accacaggaattgatcccccaaaagacatcacaattagcaatgtgaccaaggactcattg
atggtctcctggagccctcctgttgcatcttttgattactaccgggtatcatatcggccc
acaaaagtgggacggctggacagctcagtagtgcccaacactgtgaccgaattcaccatc
accaggctatacccagctaccgaatatgaaatcagcctcaacagcgtgcgaggcagggag
gagagtgagcgcatctgcactctcgtgcacacagccatggacaaccctgtagatctgatt
gctaccaacatcactccaacggaagccctgctgcagtggaaggcacccgcgggtgaagtg
gagaactacgtgattgttctcacacactttgcagtcgctggagagaccattctggttgat
ggagtcaatgaggaatttcagcttgttgacctacttccttgcacccactatactgtcacc
atgtatgccaccagcgggcctctcaccagtggcaccgtcagcaccaacttctccaccctc
ctggaccctcctggaaacttgacagccagcgaagtcaccaggcagagtgtcctgatctcc
tggcagcctcccagagcagagattgagaactacgtcttgacctacaagtccactgatgga
agccggaaggagctgattgtggatgcagaggacacatggatccgattggagggcctttca
gagaacacggactacacggtgctcctgcaggcagcccgggatgccacgcggagcagcatc
acctcgaccgccttcaccacggggggccgggtgttccctcatcctcaagactgtgcccag
catttgatgaatggagacaccctgagtggagtttacaccatcttcctcaatggggagctc
agccagaagttacaagtgtactgtgacatgaccaccgatggaggtggctggattgtattt
cagagacggcagaatggccaaactgattttttccggaaatgggctgattaccgggctggc
tttgggaacctggaggatgaattttggctggggctggacaacatccacaggatcacgtcc
cagggccgctatgagcttcgtgtggatatgagggatggccaggaggccgcctttgcctcc
tacgacaagttctcagttgaggacagcaggagtctgtacaaactccgcataggcagctac
aacggcactgcgggggactccctcagctatcatcaaggacgccctttctccacagaggac
agagacaatgatgttgcagttaccaactgcgccatgtcatacaagggggcttggtggtac
aagaactgccaccggaccaacctcaatgggaaatatggggagtccaggcacagtcagggg
atcaactggtaccattggaaaggacacgagttctccatcccctttgtggaaatgaagatg
cgcccctacaatcaccgtgtcatggtggggaggaaacgacggtccttacagttctga
DBGET
integrated database retrieval system
