Loxodonta africana (African savanna elephant): 100656889
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Entry
100656889 CDS
T04351
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lav04040
]
100656889 (SCN11A)
Ion channels [BR:
lav04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100656889 (SCN11A)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
100656889
NCBI-ProteinID:
XP_010593799
LinkDB
All DBs
Position
Unknown
AA seq
1777 aa
AA seq
DB search
MDDRFYTIIFPDERNFRPFTPDSLAAINKRIAIEKERKKSKDQTATEPKLRPQLDLKVSR
KLPKLYGDIPPELVAKPLEDLDPYYRNHKTFMVLNKKRTIYRFSAKHALFVFGPFNPIRS
LAIRVLIHSVFSVFIICTVTVNCVFMASIPAKHNSGNDSNIPEYVFTGIYIFEALIKILA
RGFVLDEFSFLRDPWNWLDSIVIATAFASYFPATKISLSSLRTFRVFRALKAISVVSGLK
VIVGALLRSVKKLVDVMILTLFCLSIFALVGQQLFMGSLNQKCVRKDCLNGTLFEDKGNC
FEKKGNSAEDKLCSILGDNSSCSEQFTCSHTKYNPDYDYTNFDSFGWSVLAMFRLMTQDS
WERLYRQVLHVTGYFSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKEKL
FQEAQKLLQEEKEALVAMGIDRSSLTSLEASSFVPKKRKLFGSRKRKPSFLRESGKDQAP
GSDSDEDSKKKPRLLEQTKRLSQNLSVDHFDENRDPSQRQRALSAVSILTITIQEQEKSQ
EPCLSCGESLASKYLVWDCSPQWLRIKKVLRTVVTDPFTELAITICIIVNTVFLALEHRR
MKEDFKDMLATGNKVFSGIFIAEVCLKIIALDPYHYFHGGWNVFDFVVALLSLADVLTFD
KSIPVLRSFRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMHLF
GAQFNSTRTKQPCSSKAPCQRRWHMENFYHSFLVVFRILCGEWIESMWECLQETGSYLCV
FVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGNSEEGAKKTKVQLALSRFHQAFCFVMH
TVRHFFCHWCRRPNLPRQKELIGSPASRSKDIIPLVVETKIGPETGEEFGALTSPRKAID
DGYERTRLAPLAEEEYDIESPDEDNVHPDTQPETAKQAYELHQKTLKSSSPEVQSVEIDV
FPEDEQATVHNPRKKSDATSVLSYCSTIDPVDPFRWLPEMVPKKQPERCLPKGLGHCFPR
CGMDKGRPLWVTWWKLRKTCYQIVKHSWFESFVIFVILLSSGMLVFEDIHLKEQPKIQAL
LNCTDSIFTYIFILEMGLKWVAFGFSKYFTSAWCWLDFIIVIVSVTSLIDLKPLKSFRTL
RALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVSLFCGKFERCIN
KTDMNSVIDYEIIANKSQCVSKNFSWVNLDVNFDNVGMAYLALLQVATFKGWTDIMYAAV
DFRGDMQQPKFEENQYMYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKISGQDIFMTE
EQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDLVTSQVFDILIISLIVLNMISMMVES
EDQSDDVESTLETLNLAFVAIFTVECLIKIFALRQYYFTNGWNLFDCVVVVLSIVSTMIS
YLKSKQNIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLV
MFIYAIFGMKYFSEVKQESGIDDMFNFQTFVSSMLCLFQITTSAGWDTLLNPMLKTNDPC
DFSLENCYLPAIAIAYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLSEDDFEIFY
EVWEKFDPEATQFIRYSALSDFADALPEPLRVAKPNRFQFLVMDLPMVSGDRLHCMDVLF
AFTTRVLGDSEGLDSVKAMMEEKFMEANPFKKLYEPIVTTTKRKEEERCAAVIQKAFRRY
ITMTRSALEDRPHPPLQTLCNGDLSSSGVTEGKVHYD
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaggttctacacgatcatcttcccagatgaacggaatttccgtcccttcacc
cctgactctttggctgcaatcaataagcggatcgccatcgaaaaggagagaaagaaatcc
aaagatcagacagccacggagcccaagcttcggcctcagcttgacctaaaggtctccagg
aagttgcccaagctgtacggcgacattccccccgagctcgtagcgaagcccctggaagac
ttggacccctactacagaaatcataagacatttatggtgttgaacaaaaagagaaccatc
taccgcttcagtgccaagcatgccttgttcgtttttggacctttcaatccaatcagaagt
ttagccattagagttttgattcattcagtatttagcgtgttcatcatctgcacggtcacc
gtcaactgcgtgttcatggccagcatccctgctaagcacaacagtggcaatgacagtaac
attcctgagtatgtcttcactgggatctatatttttgaagctttgataaaaatattggca
agaggctttgttctggatgagttttctttccttcgagatccatggaactggctggactcc
attgtcattgcaacagcgtttgcatcatattttccagccaccaaaatcagtctttcatcc
ttgcggacctttcgtgtgttcagagctttgaaagcgatttcagtggtttcaggtctaaag
gtcattgtaggcgccttgcttcgctctgtgaagaagcttgttgatgtgatgatcctgacc
ctcttttgcctgagcatctttgccttggttggtcagcagctcttcatgggaagtctgaac
cagaaatgcgtcagaaaggactgtctaaatggaactctttttgaagataaaggcaattgt
tttgaaaagaaaggtaactctgctgaagacaaactgtgtagcatcttgggggataacagt
tcctgttccgaacaatttacatgcagccacaccaaatacaatcctgactatgattatacg
aatttcgacagctttggctggtctgttcttgccatgttccggcttatgacccaagattcc
tgggagaggctgtatcgacaggtcctgcacgtcactgggtacttctcagtcttcttcttt
gtggtggtcatcttcctgggctctttctacctaattaacttaaccctggctgtcgtcacc
atggcttacgaggagcagaacaggaatgtagctgctgagacagaggccaaggagaagctg
ttccaggaagcccagaagctgttacaggaggaaaaggaggccctggttgccatgggaatt
gacagaagttcacttacttcccttgaagcatcatcttttgtcccaaagaagagaaagcta
tttggtagtagaaaaaggaagccttcctttttgagagaatctgggaaagaccaggctcca
ggatcagattctgatgaagattccaagaaaaagccacgcctcctagagcaaaccaaacgg
ctctcccagaatctgtcggtggaccacttcgacgagaacagagacccctcgcaaaggcag
agggccctgagtgctgtgagcattctcaccatcaccattcaggaacaagaaaaatcacag
gagccttgcctttcatgtggggaaagcctggcatccaaatacctggtgtgggactgtagc
ccccagtggctacgcattaagaaggtgctgagaactgtggtgacggaccccttcactgag
ctagccatcaccatctgcatcatagtcaacactgtcttcttggccttggagcatcgcaga
atgaaggaagactttaaggacatgttggctacaggcaataaggttttcagtggcattttt
atagcagaagtgtgcctcaaaatcattgcactcgatccctaccactatttccatggaggc
tggaacgtttttgacttcgtggttgcccttctgagtcttgcagacgtgctgacctttgac
aaatcaataccagtcttgcgttccttcagagtgctgagggtcttcaagttagccaaatcc
tggccaactttaaacacgctgattaagataattgggcattccgttggcgccctgggaaac
ctcaccgttgtcctggccatcgttgtctttattttctcagtagttggcatgcaccttttt
ggcgcccagttcaattccacgaggactaaacaaccgtgtagctccaaagcgccctgtcaa
cgccgctggcacatggagaacttctaccattccttcctggtggtgttccgtatcctctgt
ggggagtggatagagagcatgtgggagtgcctgcaggagacagggtcctacctgtgcgtc
ttcgtcttcctgctgatcatggtgatagggaagcttgtggtgctcaacctcttcattgcc
cttctgctcaattccttcagcaacgaggagagagacggaaactcggaagaaggggccaaa
aaaaccaaagtccagctggccctctctcggttccaccaggctttttgttttgtgatgcat
actgttagacatttcttttgccactggtgcaggaggccaaacttaccaaggcaaaaagag
cttataggaagccctgcttccaggagcaaagacatcattcccctggtcgtagagacaaaa
ataggcccagagaccggggaggagtttggtgcactgacctctccacgaaaggccattgat
gatggatatgaacggactcggctggccccacttgcagaggaagaatatgacatcgaatct
cctgatgaagataatgtacaccctgacacacaacctgagaccgcgaaacaggcctatgaa
ctccatcagaaaaccctgaagtcttccagcccagaagttcaaagcgtggaaattgacgtg
ttccctgaagatgagcaggcgacagtacacaatccccgaaagaagtctgatgctaccagt
gtgctatcctactgtagcaccattgatccagtagatccctttaggtggctacctgaaatg
gttcccaaaaagcaaccagagagatgtttgcccaaaggcctgggtcactgctttccacgc
tgcggcatggacaagggaaggcccctctgggtcacgtggtggaagctgcggaagacctgc
taccaaatagtgaagcacagctggtttgagagctttgttatctttgtgattctgctgagc
agtgggatgctggtatttgaagatattcatcttaaggaacaacccaaaattcaggcatta
cttaattgtactgacagtattttcacatacatttttatcctggagatgggtctgaaatgg
gtggcctttggatttagcaagtatttcaccagtgcctggtgctggctggatttcatcatt
gtgattgtctctgtgaccagcctcatcgacttaaagcccttaaaatccttccgtactctg
cgagcactgaggccccttcgtgcgctgtcccagtttgaaggaatgaaggtggtggtcaat
gctctcataggtgccatacctgccattctgaatgttttgcttgtctgcctcattttctgg
ctgatattttgtatcctgggagtaagcttgttttgtggaaaatttgaaagatgcattaat
aaaacagatatgaactcagttatagattatgaaatcattgcaaacaaaagccagtgtgtc
agtaaaaatttctcctgggtcaacctggacgtgaactttgacaatgtgggaatggcttac
ctcgctctgctgcaagtggcaacatttaagggctggacagatatcatgtatgcagctgtt
gattttagaggggatatgcaacagccaaagtttgaggagaatcaatacatgtacctatac
ttcgtagtttttatcatctttggctcattcttcactctgaatctctttattggtgttatt
attgacaacttcaaccaacaacagaaaaagataagtggccaagacatttttatgacggaa
gaacagaagaaatactacaatgcaatgaaaaaactaggatccaaaaaacctcaaaaaccc
attccaaggcctctgaacaaatgccaaggtcttgtgttcgacctagtcaccagccaggtc
tttgacatcctcatcataagtctcattgtcctaaatatgatcagcatgatggtggaatcg
gaagaccaaagtgatgatgtggaaagcacccttgagactctcaacctggcctttgtggct
atctttacagtggagtgtctcatcaaaatctttgctttgaggcagtactacttcaccaac
ggctggaatttatttgattgtgtggtcgtggttctttctattgttagtacaatgatttct
tacttgaaaagcaaacagaacattccttttcctccaacgctcttcaggattgtccgcttg
gctagaataggccgaatcctgagacttgttcgagcagcacgtggaattaggactcttctt
tttgctctgatgatgtcacttccttctctgttcaacattggtcttctgctctttctggtt
atgtttatttatgctatttttggtatgaaatatttttctgaagtgaaacaagagtctgga
attgacgacatgttcaacttccaaacatttgtcagcagcatgctgtgtctcttccagata
accacatcggcaggctgggacaccctcctcaaccccatgctgaaaacaaatgacccatgt
gacttctccctggagaactgttacctccctgccatagccatagcctacttcgtcagctac
atcatcatctcttttctcattgtggtcaacatgtacatcgctgtgattctagagaacttc
aatacagccactgaagaaagtgaggaccctttgagtgaagatgactttgaaatattctac
gaagtctgggaaaagtttgatccagaagcgacacagttcatcagatattctgccctttct
gactttgctgatgccctgcctgagcctttgcgtgtggcaaaaccaaatagatttcaattt
ctagtgatggacttacccatggtgagtggggatcgtctgcactgtatggatgttctcttc
gctttcaccactagggtgcttggtgactccgagggcctggatagcgtgaaggcaatgatg
gaggagaagttcatggaagccaaccctttcaagaagttatatgaacccatagtcaccacc
accaagaggaaagaagaggaaagatgtgctgctgttattcaaaaggcctttcgaaggtac
ataacgatgaccaggagtgccttggaagacaggcctcacccaccactccagacactctgc
aatggagatttgtccagctcaggggtgactgagggcaaggtccactatgactga
DBGET
integrated database retrieval system
