Loxodonta africana (African savanna elephant): 100657017
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Entry
100657017 CDS
T04351
Name
(RefSeq) protocadherin beta-3
KO
K16494
protocadherin beta
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lav04515
]
100657017
Cell adhesion molecules [BR:
lav04515
]
Cadherins
Protocadherins
100657017
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
PGBA_N
Motif
Other DBs
NCBI-GeneID:
100657017
NCBI-ProteinID:
XP_003404601
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MKAGGKRFLRQRQVLLLFVFLGGSLTVSESVRYSVAEEKERGFLIANLAKDLGLRVGELT
ARRAQVVSKGNEQHFQLNYQNGDLLLNEKLDREELCGSTEPCILYFHVLLQNPLQLFTNE
LQVKDVNDHSPIFLENEMQLKILESSPPGTTFPLENAEDLDVGRNGLQNYTVIPNSHFHV
LTRSRSDGRKYPELVLDKALDREELPELSLTLTALDGGSPPRSGTARINILVLDINDNAP
EFAQPLYEVQILENSPLNSVIVTVSATDLDTGNFGTITYAFSHASEEILKTFQLNPITGD
IQLVKYLNFETINTYEVDVEAKDGGGLSGKSTVIIQVVDVNDNPPELTLSSVNSPIPENS
LETVVAIFRISDLDSGDNGRMKCSIPNDLPFILKPAAENFYILVSKGALDREKRDQYNIT
ITVTDLGTPRLETQHNIMVWVSDVNDNAPTFTQTSYTLFVRENNSPALHMGTVSATDRDS
GSNAQVTYSLLPAQDPHLPLASLVSINADNGHLFALRSLDYEALRAFEFRVGAADAGFPA
LSSEALVRVEVVDDNDNSPFVLYPLQNGSAPCTELVPRAAEAGSLVTKVVAVDSDSGQNA
WLSYQLLKATEPGLFSVWAHNGEVRTARLLSERDAIKHRLVVLVKDNGEPPMSATVTLHV
LLVDGFSQPYLPHPEVAPDEAQADWLTVYLVIALASVSSLFLFSVLLFVGVRLCRRNGAA
LVDRYPVPESNFPGHLVDVRGTGTLSQSYQYEVCLTGGSGINEFKFLKPIFSRGLVQDTE
QD
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaggagggaaacgctttcttagacaaaggcaagtcctacttctctttgttttt
ctgggtgggtctctgactgtgtccgagtctgttcgctattctgtggctgaggaaaaagag
aggggctttttaatagccaacctagcaaaagatctggggctgagggtgggagaactgaca
gccagaagagcccaagttgtgtccaaagggaacgaacagcattttcagctcaactatcag
aacggtgatttgctcctgaatgagaaactggaccgggaggagctgtgcggctccacagag
ccatgtatactgtattttcacgtattgctgcaaaaccctttgcagttgtttacgaatgag
ctccaggtcaaagatgtaaacgaccattctcccatattccttgaaaatgaaatgcaactg
aaaatcctagaaagcagtccaccaggaacaacatttcctttggaaaatgctgaggacttg
gatgtgggaagaaacggtctccagaactacacagtcattcccaattcccatttccacgtt
ctcacacgcagtcgtagcgacggaaggaaatacccagaactagtgctggacaaagcgctg
gatcgcgaggagctgccagagctcagtttaacgctcacagcgctggatggtggatctcca
ccccggtctgggacagcccgaatcaacatcttggtcttagacataaatgacaacgcccca
gaatttgcacagcctctctacgaggttcaaattctagagaacagcccccttaactctgtc
attgtcactgtctcagctactgatctggatacaggaaattttggaacaataacatatgca
ttttcccatgcttcggaagaaattctcaaaacttttcaactaaatccaattaccggtgat
atccaactagtcaaatatttgaattttgagacgattaatacttatgaagtcgacgtagag
gccaaggatggcggaggcctttcgggaaaatcaacagtcataattcaggtggtggatgtg
aatgacaacccaccagaactgaccttatcatcagtcaacagtcccatcccagagaattcg
ctagagactgtggtagctattttcagaatttccgatctggactctggagacaatgggagg
atgaagtgttctattcccaatgatcttcccttcatcctgaaaccagccgcagagaatttt
tacattctcgtgtcaaaaggagcgctggacagagaaaagagagaccagtacaatatcact
atcactgtcactgatttgggtaccccgaggctggaaacccaacacaacataatggtgtgg
gtctcagatgtcaatgacaacgctccaactttcacacaaacctcctacaccctgttcgtc
cgcgagaacaacagccccgccctgcacatgggcaccgtcagcgccacagacagagactca
ggctccaacgcccaagtcacctactcgctgctgccggcccaggacccgcacctccccctc
gcctccttggtctccatcaacgcggacaacgggcacctcttcgctctcaggtcgctggat
tacgaggccctgcgagcctttgagttccgcgtgggcgcggcagacgcaggcttccccgcg
ctgagcagcgaggcgctggtgcgcgtggaggtcgtggacgacaacgacaactcccccttc
gtgctgtacccgctgcagaatggctctgcgccctgcaccgagctggtgcccagggcggct
gaggcgggctccctggtgaccaaggtggtggcggtggacagcgactcgggccagaacgcc
tggctgtcctaccagctactcaaggccactgagcccgggctgttcagcgtgtgggcccac
aatggcgaggtgcgcacagccaggctgctgagcgagcgcgacgcgatcaagcacagactc
gtcgtgctggtcaaggacaatggcgagccgccaatgtcggccactgtcacgctgcacgtg
ctcctggtggatggcttctcgcagccctacctgccgcacccagaggtggccccggacgag
gcccaagctgattggctcacggtctacttagtcattgctctggcgtcggtttcatcgctt
ttcctgttctcagtgctcctgtttgtcggggtgcggctgtgcagaaggaacggggccgcc
ttggtggatcgctatccagtgcctgagagcaactttccaggccacttggtggacgtgagg
ggtaccgggaccctgtcccagagctaccaatacgaggtgtgcctgaccggaggctctggg
ataaatgagttcaagttcctgaagccaattttctccaggggtctagttcaagacactgag
caagactag
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