Loxodonta africana (African savanna elephant): 100657170
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Entry
100657170 CDS
T04351
Symbol
SCN10A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lav04040
]
100657170 (SCN10A)
Ion channels [BR:
lav04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100657170 (SCN10A)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
Na_trans_cytopl
CcmD_alt
GPHH
CytochromB561_N
DUF2540
Motif
Other DBs
NCBI-GeneID:
100657170
NCBI-ProteinID:
XP_023410592
LinkDB
All DBs
Position
Unknown
AA seq
1961 aa
AA seq
DB search
MEFPFGSLETTNFRRFTPESLVEIEKQIAAEQAAKKARDKHREQKDKEEKPRPQLNLKAC
NQLPRFYGELPKELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFHLLR
RTAIKVSVHSYPLHGXWFSLFITATIFVNCVCMTQTDFPDKIEYVFTVIYTFEALIKILA
RGFCLNEFTYLRDPWNWLDFSVITLAYIGEAIDLRGVSGLRTFRVLRALKTVSVIPGLKV
IAGALIHSVKKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNCTLLNETANYSYNHK
WDFYFQINKPGTSDPLLCGNGTDAGRCPSGYFCLKTTENPDFNYTSFDTFAWAFLSLFRL
MTQDSWERLYQQTLRASGKIYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATLDEIE
AKEKQFQKTLEMLQKEQEVLAALGIDTASLHSHNGSPLASKNASEKRQRTKPRVSEGSTD
DNKSLQSESYNQRRMSFLGLASGRRRASHGSVFHFRAPGQDISFPDGVTDDGVFPGDQES
HRGSLLLGRGTGQQGSLPRSPLPQPSNPGSGHGKDGHPTLPTSELAPGAMEVSALDAGQK
TFLSTEYLNEPFRAQRAMSVVSIMTSVLEELEDSKQRCPPCFTTLAQKYLIWECCSSWVK
LKTCLFEIVTDPFAELTITLCIVVNTVFMAMEHHRMSPTFDAMLQMGNIVFTIFFTAEMV
FKIIAFDPYYYFQKKWNIFDCLIVTVSLMELGMSKKGSLSVLRTFRLLRVFKLAKSWPTL
NTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDSYRNNRRKISAPGEEWPRWHMY
DFFHSFLIVFRILCGEWIENMWACLEVGQKSICLILFLMVMVLGNLVVLNLFIALLLNSF
SADNLTAPEDDGEVNNLQVALARIQAFGHRTMRALCNFFHRLCLLPWPKAAPQLVVKLPL
SSSRAENHIAADTAVGSSGGVPAPRGPGDEHSDFITNPNVWVSVPIAEGESDLDDLEDDG
EEDAWSSRQEVVPKSQQEQLQQVRRNEDHLAPRSPESGMSSEDLAPYLGEKGEDKATAQD
PGEGEDDTSSSEGSTVDFPDPEEILRKIPELADDLQEPDACFTEGCMRHCPCCRVDTAKA
PWGVSWEVRKTCFRIVEHSWFESFIVFMILLSSGSLAFEDYYLEEKPTVKAMLEYADRVF
TFIFVFEMLLKWVAYGFKKYFTNAWCWLDFLIVDISLTSLIAKILQYSDMASIKALRTLR
ALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFWRCINT
TNGHFPLVPLSVVNNESDCKFQNYTGNFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIM
YAAVDSREVNMQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDI
FMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKYQGFVFDIVTRQAFDIVIMVLICLNMITM
MVETDDQSEEKTKILNKINQFFVAVFTCECVLKMFALRHYYFTNGWNVFDFIVVLLSIGS
QVFSVIMKSLDNYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLL
LFLVMFIYSIFGMSSFAYVKWEAGIDDMFNFRTFANSMLCLFQITTSAGWDGLLSPILNT
GPPYCDPNLLNSNGSRGNCGSPAVGILFFTTYIIISFLIVVNMYIAVILENFNVATEEST
EPLSEDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNRNILIQMDLPLV
PGDKIHCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWKQEDM
SATVIQKAYRKHMLQRSMTILNSTGVPRAEGETVSPTHEGFVAFTANDNCVLPDKSETAS
VTSFPPSYDSVTRGLSDRAHLSTSSSMQNEDEATRKEAGPQ
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccctttgggtctctggaaactaccaactttcgtcggttcaccccggagtcg
ctggtggagatcgagaagcaaatcgcagcagagcaggcagcaaagaaagccagagataag
cacagggagcagaaggacaaagaagagaagcctcggccccagctaaacttgaaagcctgc
aaccagctgcccaggttctatggcgagctcccaaaagaactggttggggagcccctggag
gatctggacccgttctacagcacgcaccggacatttatggtgctgaacaaagggaggacc
atttcccggttcagtgccactcgggcactgtggctcttcagccctttccacctgctcaga
agaacggccatcaaagtgtctgtccactcatatcctttgcatggttgatggttcagttta
tttattacagccactatttttgtcaactgtgtgtgcatgacacaaacggattttccagat
aaaattgagtatgtcttcactgtcatttatacttttgaagccttgataaaaatactggca
agaggattttgtctaaatgagttcacttacctgagagatccttggaactggctggatttt
agtgtcattaccctggcatacattggcgaagcaatagacttacgaggagtctcaggcctg
cggactttcagagttcttagagctttaaaaacagtttctgtgatcccagggctgaaggtc
atcgcgggggcgctgatccactcggtgaagaagctggctgatgtgaccatccttaccatc
ttctgcctgagtgtctttgctctggtgggcctgcagctcttcaagggcaacctcaagaac
aaatgcgtcaagaactgcacacttcttaatgagacagccaattactcttataaccacaag
tgggatttctatttccaaatcaacaagccgggaacctctgatcccttgctgtgcggcaac
ggaactgatgcaggccgctgtccctcaggctatttctgccttaagacaaccgaaaaccca
gactttaactacaccagcttcgacacctttgcttgggctttcctctcactgttccgcctc
atgacgcaggattcctgggaacgtctctaccagcagaccctgagggcttctgggaaaata
tatatggtctttttcgtgcttgtcatcttcctgggatctttctatctggtcaacctgatc
ttggctgtggtcaccatggcatatgaggagcagaaccaggccacccttgatgaaattgaa
gccaaggagaagcagttccagaagaccctggagatgctccagaaggaacaggaggtactg
gcagccctggggattgacacagcctctctccattcccataatggatcacctttagcctcc
aaaaatgccagtgagaaaaggcagaggacaaaaccaagagtgtcagagggctccacagat
gacaacaaatcgctccaatctgagtcttacaaccagcgcaggatgtccttcctaggcctc
gcctctgggagacgccgggctagccatggcagtgtgttccatttccgggctcctggtcaa
gacatctcatttcctgatggggtcacagatgatggagtcttccctggagaccaggaaagc
catcggggctctctgctgctgggcaggggcactggccagcaaggttccctccctaggagc
ccgctgcctcaaccctccaaccctggctcagggcatggaaaagatgggcaccccacgctg
cccactagcgagcttgcccctggagccatggaagtctcggcactcgatgcaggacagaag
actttcttgtcaacagaatacttgaatgaacctttccgggcccaaagggcaatgagcgtt
gtcagcatcatgacctccgtcctcgaggaattggaggactctaaacagagatgcccaccc
tgcttcaccaccttggctcagaagtatctgatctgggagtgctgctcctcgtgggtgaag
ctcaagacgtgtctctttgagattgtgacggacccctttgcggagctcaccatcaccctg
tgcattgtggtgaacactgtcttcatggccatggagcaccatcgcatgagccccaccttc
gatgccatgctgcagatgggcaacattgtctttaccatattttttaccgctgaaatggtc
ttcaagatcattgcctttgacccctactactacttccagaagaagtggaatatcttcgac
tgcctcatcgtcactgtgagcctgatggagcttggcatgtccaagaagggaagcctgtcc
gtgctgcggactttccgcctgctgcgggtcttcaagctggccaagtcctggccaacctta
aacacactcatcaagatcattggaaactcagtgggggcactgggaaacctcaccatcatc
ctggccatcattgtctttgtcttcgctctggttggcaagcagctcctcggggacagctac
cgcaataaccggcgcaaaatctccgcgcccggggaagaatggccccgctggcacatgtat
gactttttccactccttcctcatcgtcttccggatcctctgtggggagtggatcgagaac
atgtgggcctgcttggaagttgggcagaaatccatatgcctcatccttttcttgatggtg
atggtgctggggaacctggtggttctcaacctgttcatcgccctgctgctgaactctttc
agtgccgacaacctcacagccccagaggatgacggggaggtgaacaacctgcaggtagca
ctggcacggatccaggcttttggccatcgcaccatgcgggccctctgcaacttcttccac
aggctctgcctgcttccctggcccaaggcggcaccccagctggtggtcaaactcccactg
tccagctccagagctgaaaaccacattgctgctgatactgcagtggggagctctggaggg
gtccctgcccccagaggccctggggatgaacatagtgacttcatcactaatcccaacgtg
tgggtctctgtgcccattgctgagggtgaatctgacctcgatgacttggaggatgatggt
gaagaggatgcttggagctccagacaggaagtggtccccaaaagtcagcaggaacagctg
cagcaagtcaggaggaatgaggaccacctggcacccaggagcccagaatctgggatgtcc
tctgaggacctggctccgtacctgggggagaagggggaagacaaggccactgcccaagac
cctggagagggagaggacgatacgagctcctcagaaggcagcaccgtggacttcccagac
cctgaggagattctgaggaaaatcccagagctggccgacgacctccaagagccagacgcc
tgtttcacagaaggctgcatgcgccactgtccctgctgcagagtggacaccgctaaggct
ccatggggcgtgagctgggaggtgcgaaagacctgcttccgcatcgtggagcacagctgg
tttgaaagcttcatcgtcttcatgatcctgctcagcagtgggtctctggcctttgaagac
tattaccttgaggagaagcccacggtgaaggccatgctggagtacgctgacagggtgttc
acatttatctttgtgtttgagatgctgctcaaatgggtggcctacggcttcaagaagtac
ttcaccaacgcctggtgctggctggacttcctcatcgtggacatctcactgacaagcctc
atagcaaagatcctgcaatattctgatatggcatctatcaaagcccttcgcactctccgt
gccctgcggccactgcgggctctgtctcgatttgaaggcatgcgggtggttgtggatgcc
ctggtgggtgccatcccgtccatcatgaacgtcctcctcgtctgcctcatcttctggctc
atcttcagcatcatgggcgtgaacctcttcgcggggaagttttggagatgcatcaacacc
accaatggacattttcctcttgtgcccttgtccgttgtgaataacgagtctgattgtaaa
tttcaaaactacactggcaacttcttctgggtcaatgtgaaggtcaactttgataacgtt
gcaatgggttaccttgcacttcttcaggtggcaaccttcaaaggctggatggatatcatg
tatgcagctgtcgattcccgagaggtgaacatgcagcccaagtgggaagacaacgtgtac
atgtacttgtactttgtcatcttcatcatttttggtggcttcttcacactgaatctcttc
gttggggtcataattgacaacttcaatcaacagaagaaaaagctagggggccaagacatc
ttcatgacagaggagcagaagaagtactacaacgccatgaagaagctgggctccaagaag
ccccagaagcccatcccacggcctcagaacaagtaccaaggcttcgtctttgacattgtg
accagacaggcttttgacatcgtcatcatggtcctcatctgcctcaacatgatcaccatg
atggtggaaactgatgatcagagtgaagaaaagacaaaaatcctcaacaaaatcaaccag
ttctttgtggctgtcttcacctgcgagtgcgtcctgaagatgtttgccctgaggcattac
tacttcaccaatggctggaatgtatttgatttcattgtcgtgcttctctccattgggagc
caggtgttttctgtaatcatgaagtcacttgacaattacttctccccaacactcttccgc
gtcatccgcctggcccgaatcggccgcatcctcagactaattcgagcagccaaggggatc
cggacgctgctctttgccctcatgatgtccctgcccgccctgttcaacatcggccttctg
ctctttctcgtcatgttcatctactccatcttcggcatgtccagctttgcatatgtcaaa
tgggaggctggcatcgatgacatgttcaacttccggacctttgccaacagcatgctgtgc
ctcttccagatcaccacgtcggccggctgggatggcctcctcagtcccatcctcaacaca
gggcccccctactgtgaccccaatctgctcaacagcaatggctcccgggggaactgtggg
agcccagccgtgggcatcctgttctttaccacctacatcatcatctccttcctcatcgtg
gtcaacatgtacattgcagtaattctggagaacttcaatgtcgccacagaggagagcacc
gagcccctgagcgaggatgactttgacatgttctatgagacctgggagaagtttgaccca
gaggccacccagttcattaccttttctgccctctcagactttgcagacaccctttctggc
cccctgagaatcccgaagcccaatcggaatatattaatccagatggacctgcccttagtc
cctggagataagatccactgtttggatatcctttttgccttcaccaagaatgtgttggga
gaatctggggaattggattctctgaaggcaaatatggaagagaaatttatggcaactaat
ctttcaaaggcatcttatgagccaatagcaaccaccctgcggtggaagcaagaagacatg
tcagccactgtcatccagaaggcttatcggaaacatatgcttcaacgctccatgaccatc
ctaaactccacaggtgtgccaagggctgagggggagaccgtgtcacccacacatgagggc
tttgttgcattcacagcgaatgacaattgtgtgctcccagacaaatctgaaacagcatct
gtcacatctttcccaccatcttatgacagcgtcactagaggcctcagtgatagagcccac
ctgagcacatcgagctcaatgcagaatgaagatgaagcgaccaggaaggaagcagggcca
cagtga
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integrated database retrieval system
