Loxodonta africana (African savanna elephant): 100657273
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Entry
100657273 CDS
T04351
Name
(RefSeq) LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03430
Mismatch repair
lav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100657273
03460 Fanconi anemia pathway
100657273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lav03400
]
100657273
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
100657273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
HRI2_3H
PK_Tyr_Ser-Thr
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Kdo
Motif
Other DBs
NCBI-GeneID:
100657273
NCBI-ProteinID:
XP_023411608
LinkDB
All DBs
Position
Unknown
AA seq
1700 aa
AA seq
DB search
MLGDSSGPREREAEGAGAAAVPAPPAIDFPAEGSDPKYDESDVPAELQVLKGPLQQPTFP
FAVANQLLLVSLLEHLSHVHEPNPVRSRQVFKLLCQTFIKMGLLSSFTCSDEFSSLRLHH
NRAIVHLMQSAKERVRQDPREENSRIQKIRPREVAFEAQTSRYLNEFEEIAILGKGGYGR
VYKVRNKLDGQYYAIKKILIKGATKTDCMKVLREVKVLAGLQHPNIVGYHTAWIEHVHVA
QPQDRPSIQLPSLEMLSDQEDDRDQYEFKNDDSSSSSIIFAELTSDKEKAFGESGFENRS
NRLVNCSTNLVPRDAREFESSVELQEHGLSITEHQLPLGHDSDLKENFTFTEESSEENVN
LFGRTEVQYHLMLHIQMQLCERSLWDWITERNRRGRECVDESSCPYVMVSVATKIFQELV
EGVFYIHHMGIVHRDLKPRNIFLHGPDQQVKIGDFGLACTDILQKNTDWTNRNGKGMPTH
TSRVGTCLYASPEQLEGSQYDTKSDMYSLGVILLELFQPFGTEMERAEVLAGLRIGQIPT
SLSKRCPVPAKYIQHLTRKNSSQRPSAVQLLQSELFQNSGNVNLTLQMKVIEQEKEIEEL
KRQLSLLSQDKGAPSHWRSPSAEAQTTVPHLLRHKRKKVVDSGGPPRSRVSPQPAGRRGE
LAAAPFPCRSGRSGGGWGKGRAALSYLHVARVWRRAAAPAVYVREPVHARWKLYAERSAA
SVVGFYLVHRHRGNPRREAGQRRTRTHRNRQRPRRTADVWEGAVRPLXLVGALSTQPISE
KDIGKLPPPRPERAGHSRRGSRWAAGRRGPCGSSGSGNLAARRSWSRSVSMERAEGSSTE
LAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIELRLKDYGADLIEVSD
NGCGVEEENFEGLTLKHHTSKIQEFADLTHVETFGFRGEALSSLCALSDVTISTCHTTAK
VGTRLVFDHSGKIVQKSPYPRPRGTTVSVQQLFYTLPVRHKEFQKNIKKEYAKMIQVLHA
YCIISTGVRLSCTNQIGQGKRQPVVCTSGNSNIKENIGSVFGQKQLQSLIPFVQLPPSES
VCEEYGLHSSEALQNLFCISGFISHCTHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVY
HMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLVGMFDGDVNKL
NVSQQPLLNIEGKVVKTHSVEMEKPLPDKQESPALFRTQGEEKRAVTISRLREAFSLHHT
AESQPQGLRTPEPKQGAPGPKTRVPFSSTSDTLHSQKPVSGRGVCSPQDEGVHPGEGPCN
HRDTVEMEKDSGHSSTSAGSEVEDSTPETGSHFSSDQATSSPEDGVSQEKVKSCEKSPEM
DRPFSDVECHTDQEDTGYKCRLLPQPTSISSSNIKRFKKEEISSNSDVPQKSINPENSSV
SLVDVAIKINKKIVPLDFSMTSLAKRIKQLHQQGQQREDKQNYRRFRAKICPGENQAAED
ELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTVLQGQK
LIIPQTLNLTAVNEAVLIENLEIFRKNGFDFLIDEDAPVTERVKLISLPTSKNWTFGPQD
IDELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWN
CPHGRPTMRHIANLDVVSQN
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgctgggggacagctctgggccccgggagcgcgaagcggagggcgccggggcggcggct
gtgcctgcgcctcctgccatcgacttccccgccgagggctcggaccccaagtatgatgag
tctgatgtgccagcggaactccaggtgttaaaaggaccgctgcagcagccaactttccct
tttgccgttgcaaaccaactgttgcttgtttctttgctggagcacttgagccatgtgcat
gagccaaatccagttcgttcaagacaggtgttcaaattactctgtcaaacctttatcaag
atggggctgctatcttctttcacctgtagtgatgaattcagctccctgagactacatcac
aacagagctattgttcatttaatgcagtcagctaaagagagagttcgtcaggatcctcgt
gaggagaattctcgtatccagaaaattagaccaagagaagtagcctttgaagcacaaacc
tcacgttacttaaacgaatttgaagagattgccatcttaggaaaaggtggctatggaaga
gtatacaaggtcaggaataaattagatggccagtattatgcaattaaaaaaatcctgatt
aagggtgcaactaaaacagattgcatgaaggtactacgggaggtgaaggtgctggcgggt
ctgcagcatcctaacattgtaggctaccacactgcttggatagaacatgtccatgtggcc
caaccacaagacagaccttctattcagctgccctctttggaaatgctctccgaccaggaa
gacgacagagatcaatacgaatttaaaaatgatgacagtagcagctcatccattatcttt
gctgagttaacctcagacaaagaaaaagcctttggagaatctggctttgaaaatcgaagt
aacagattggtgaactgttccaccaatttagtcccaagagatgcccgcgaatttgaatca
tccgttgaactacaagaacatggcttgtcaattactgaacatcagctgccgcttgggcat
gactcagacctgaaggagaatttcacattcactgaggaatcttctgaagaaaatgtaaac
ttgtttgggcggacagaggtgcagtaccacctgatgctgcacatccagatgcagctgtgt
gagcgctcgctgtgggactggattaccgagaggaacaggaggggccgggagtgtgtggac
gagtcgtcttgtccttacgttatggtcagcgttgcaacaaaaatttttcaagaattggtg
gaaggtgtattttacatacatcacatgggaattgtgcatagagacttgaagcccagaaat
atttttcttcatggccctgatcagcaggtaaaaataggagactttggtctggcctgcact
gacatcctacagaaaaacacagactggaccaatagaaatgggaagggaatgccgacgcat
acttccagagtgggaacttgtctatatgcttcccccgagcagttggaaggatcccagtat
gataccaagtcagatatgtatagcttgggtgtaattctgctagagctctttcagccattt
ggaacagaaatggaacgagcagaagttttagcaggtttaagaattggtcagatacccaca
tccctcagtaaaaggtgtccagtaccagccaagtatatccagcacttaaccagaaagaat
tcatcccagcgaccatctgccgttcagctgctacaaagtgaacttttccagaattccgga
aatgttaatcttaccctacagatgaaggtaatagagcaagaaaaagaaattgaagaacta
aagaggcagctgagtctcctctctcaggacaaaggggcaccgtcccactggcgctccccg
tctgctgaagcacagaccacagtaccacatctgctacgccataagcgaaaaaaagtcgtt
gactccgggggccccccgcggagccgggtctctccacagccggccggccggcgcggggag
ctggcggccgcgccctttccatgccggtcgggacgcagcggtgggggctggggtaagggc
cgcgccgctctctcctacctgcacgtggcccgcgtctggcgcagggcagccgctccggcc
gtgtacgttagggagccggtacatgcacgttggaagctctacgcggagaggagcgccgcc
tccgtggtagggttttacctggtacatcggcatcgcggcaacccaaggagggaagctgga
cagagacggacacgaacgcacagaaaccgtcaaaggccacgacggactgcggacgtttgg
gaaggcgccgtccggcctctctaattggttggagccctttcgacacaaccaatcagcgaa
aaggatatagggaaacttccgcctcctcggccggaaagggcggggcacagtcgccgaggc
agccgatgggcggctgggaggcggggcccttgtgggagcagcggcagcgggaaccttgcg
gctcgcagaagctggtcgcgttctgtatccatggagcgagctgagggttccagtacagaa
cttgcgaaggccatcaaacctatcgatcggaagtcagtccatcagatttgttctgggcaa
gtggtactgagtctaagtactgccgtgaaggagttggtagaaaacagtgtggatgcaggt
gccactaatattgagttgagacttaaagactatggggcggatctcattgaagtttcagac
aatggatgcggggtagaagaagaaaactttgaaggcttaactttgaagcatcatacttct
aagattcaagaatttgctgatctcactcatgttgaaacgtttggctttcggggagaagct
ctgagctcactttgtgcactcagtgatgtaactatttctacctgtcacacgactgcaaag
gttgggactcgactggtgtttgatcacagtgggaaaattgttcagaaaagcccttaccca
cggccaagagggaccacggtcagcgtgcagcagttattttatacgctccctgtgcgccat
aaggaatttcagaagaatattaaaaaggagtatgccaaaatgatccaagtcttacacgcc
tactgtatcatttcaacaggcgttcgtttaagttgcaccaatcagattggacaaggaaaa
cggcagcctgtagtctgcaccagcggaaactccaacataaaggaaaatattggatctgtg
tttggacagaagcagttgcaaagcctcattccttttgttcagctgccccctagtgagtct
gtttgtgaagagtatggtctgcactcttcagaagctctacagaatctcttttgcatttca
ggtttcatttcacattgcactcatggtgttggaagaagttcaactgacagacagtttttc
tttatcaatcggcggccttgtgacccagcaaaggtttccagacttgtgaatgaggtctat
cacatgtataatcgacaccagtatccttttgttgttcttaacatttctgttgattcagaa
tgtgtcgatatcaatgttaccccagataaaaggcaaattttactacaagaggagaagctt
ttgttggcagttttaaagacgtctttggtaggaatgtttgatggtgatgtaaacaaactt
aacgtcagtcagcagccactgttgaatattgaagggaaagtcgtgaaaacgcactcggtg
gagatggaaaagcctttgccagataaacaggagagccctgctttgttccggactcaagga
gaagaaaaacgggcagtgactatttccagactgagggaggccttttctcttcatcacaca
gcagagtcccagcctcagggcctgagaactcctgagccgaaacagggtgctcctgggcca
aaaacaagagtaccattttctagcacgtcagatacgctgcactcccagaagcctgtctct
ggcaggggcgtgtgtagccctcaggacgagggtgtgcatccaggcgagggcccctgcaac
cacagggacacggtggagatggagaaggactcggggcacagcagcacctcagcgggttca
gaggtggaggacagtaccccagagacgggcagccacttcagtagtgaccaggcaaccagc
tcccctgaagatggagtttcacaagaaaaggtaaaatcatgtgagaaatcacctgaaatg
gaccgtcctttttcagatgtggaatgccacacagaccaggaagatactgggtataaatgt
aggcttttgcctcagcctactagcatctcatcctcaaacataaagcgttttaaaaaagaa
gaaatttcttcaaattctgacgttcctcaaaagtcgattaatcctgaaaacagttcagta
tctctggttgatgtagccattaagattaataagaaaattgtgcctcttgacttctccatg
acctctttagctaagcgaataaagcagttacatcagcaaggacagcaaagagaagacaaa
cagaattacaggcgatttagggcaaagatctgccctggagaaaatcaagcagcagaagat
gagctaagaaaagagataagtaaaacaatgtttgcagaaatggaaatcattggtcagttc
aacttgggatttataataactaaactgaatgcggatatcttcatagtggaccagcatgcg
acagatgagaaatacaactttgagatgctgcagcagcacaccgttctccagggccaaaag
cttattatacctcagactctcaatttaactgcagtcaatgaagctgttctgatagaaaat
ctggaaatttttagaaagaatggctttgactttctgatcgacgaagatgctccagtcact
gaaagagtaaagttgatttccttgccaactagtaaaaactggaccttcggaccccaagat
atcgatgagctgatctttatgctgagtgactgccctggggtcatgtgccgaccttcccga
gtacggcagatgttcgcctccagagcctgccggaagtctgtgatgattggaacagctctt
aacacaagtgagatgaagaagctcatcactcacatgggcgagatggaccatccctggaac
tgcccccatgggagaccaaccatgagacacattgccaatttggatgtcgtttcccaaaac
taa
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integrated database retrieval system
