Entry |
|
Symbol |
TRMT13
|
Name |
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
|
KO |
|
Organism |
lav Loxodonta africana (African savanna elephant)
|
Brite |
KEGG Orthology (KO) [BR:lav00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:lav03016]
100657527 (TRMT13)
Enzymes [BR:lav01000]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
100657527 (TRMT13)
Transfer RNA biogenesis [BR:lav03016]
Eukaryotic type
tRNA modification factors
Methyltransferases
100657527 (TRMT13)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
485 aa
MEAFAPTPQVTGFPAEGRCGYYVEKKKRFCRMVVAAGKRFCGEHAGVAETDAEEENARKR
ILCPLDPKHTVYEDQLAKHLKKCNSREKPKPDFFIQDINAGLKDETEIPEQLVPVSFLSE
EQLENLIKKLRKASAGLNSTLKDQIMSHPVLHDALNDPRNGDSATKHLKQQASILGNIEK
LKLLGPRRCFVEFGAGRGKLSHWVDIALKDAEKVHFLLVEKVTTRFKVDGKHRKKNAVFE
RLQIDIQHLCLNKIPLLIEEKLPVVGIGKHLCGVATDLALRCLVETYAASCEERSEEPLA
KRIKNDKTETEINTLAKEGNEKNVPEKWTPVAGIVIALCCHHRCDWRHYVGKEYFRALGL
GAVEFHYFQRMSSWATCGMRRTSSEASNVTTKRKDNQNNESEVHGDNGYRMADDSADSLP
GFLTVGERKKIGHLCKLLIDHGRMQYLQQKGFSPALQYYTDPLVSLENVLLTAVPNRSSS
PETVA |
NT seq |
1458 nt +upstreamnt +downstreamnt
atggaggcttttgcgccgacgccgcaagtgactggttttccagctgagggtagatgcggt
tactacgtggaaaagaagaagcggttctgcagaatggtggtggcagcagggaaacggttc
tgtggtgaacacgctggagtcgcggagacggacgctgaggaagaaaatgctcgaaaaaga
atcctgtgtcctttagatccaaaacacacagtatatgaagatcaactagcaaaacatttg
aaaaagtgtaactcaagagagaagccaaaacctgacttctttattcaagatattaatgca
ggcttaaaagatgaaacagaaatacctgaacaattagtgccagtttcttttctatctgaa
gagcagttggaaaacttaattaagaaactgagaaaagcaagtgcaggtttgaactctacc
cttaaagatcaaattatgtcccatccagtactgcatgatgcccttaatgaccccagaaac
ggtgattctgcaaccaagcacctgaaacagcaggcttctattttaggtaacattgaaaaa
ttaaagttacttggtccaagaagatgctttgttgaatttggagcaggaaggggaaaatta
tctcactgggttgatattgccttaaaagatgctgaaaaagttcacttcctcctagtagaa
aaggtgaccacaagattcaaggtagatggtaaacacagaaagaaaaatgcagtgtttgaa
agacttcaaattgatattcaacacttgtgtttgaacaagattcctttgctaatagaagaa
aaactacctgtggtaggaattggaaagcatctgtgtggtgtggcaacagatcttgcatta
cgatgtttggttgaaacctatgctgccagttgtgaggaaaggagtgaagaacctttagcc
aaacgcataaagaatgataaaacagaaacagaaattaacactttggccaaggaaggaaat
gaaaaaaatgtcccagagaagtggacccctgtggccggcattgttattgcactctgttgt
caccacaggtgtgattggagacattatgtgggcaaagaatatttcagggctctaggcctt
ggagcagtggaattccactatttccagcgaatgagtagttgggcgacttgtgggatgcgg
agaacatcttcggaagcctcaaacgttaccacaaagagaaaagataatcagaataatgag
agtgaagtgcatggtgacaacggatacagaatggcagatgatagtgctgatagtttacct
gggtttcttactgttggagaaaggaagaaaatagggcatctttgtaaattactgattgac
cacggccgaatgcagtatttacagcagaagggattcagtcctgctttacagtactataca
gaccctctggtgtctttggaaaatgtgctgttaacagctgtacccaatcgctcttcatca
ccagaaaccgttgcttag |