Loxodonta africana (African savanna elephant): 100657782
Help
Entry
100657782 CDS
T04351
Symbol
PCDH12
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-12
KO
K16499
protocadherin delta 2
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lav04515
]
100657782 (PCDH12)
Cell adhesion molecules [BR:
lav04515
]
Cadherins
Protocadherins
100657782 (PCDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100657782
NCBI-ProteinID:
XP_023405872
LinkDB
All DBs
Position
Unknown
AA seq
1185 aa
AA seq
DB search
MMQLLQLLLGLWGPGGYLFLSGECQEVATLTVKYQVSEEVPSGTVIGKLSQELGWKERHE
LEVAAFQVLQLPQVLPIQVDAEDGLLSTGRRLDREQLCRQRDPCLVSFDVLATEDLTLIH
VEIQVLDINDHQPQFPKGEQELEISESASLHTRIPLDRAVDPDTGPNTLHSYTLSPSEHF
ALDVIVGPDETKYAELVVVKELDREIHSFFDLVLTAYDSGDPPKSGTSLVKVNVLDSNDN
SPVFAESSLALEIQEDAALGTLLIKLTATDPDQGPNGEVEFFLSKHVPPEVLETFSIDAK
TGQVILRQTLDYEKNPAYEVDVQARDLGPNPIPAHCKVLIKVLDVNDNAPSIHVTWASQS
PLVSETVPRDSFIALVMANDLDSGNNGLVHCWLSQELGHFRLKRTNGNTYMLLTNATLDR
EQWPKYTLTLLAQDQGLQPLSAKKQLSIQISDANDNAPVFEKSRYEISTRENNQPSLHLI
TVKAHDADLGINGKISYRIQDSPVSHLVAIDADTGEVTAQRTLDYEQMARFEFQVIAEDR
GQPQLASSVSMCVSLLDANDNAPEVVQPVLSNGKASLSVLVNASTGYLLVPIETLNGLGP
ADADILPPATHSPPPFLLMTIVARDADSGANGELLYSIRRGNKACLFVLSPHLGQLFINV
TNASSLIGSEWELEIVVEDRGSPSLQTQALXRXXXXXXXXXXXXXXXXXGTLSTSVLTVI
CLVVLVAIFGLILALVMSICRTEKKDNRAYNCREAESTYRHQPKRPQKHIQKTDIHLVPV
LRGQVNEPGEVGQPHKDTGKEANMSEIWDPYLQAPFHLTPTLYRTLRNQGNLGELAESQE
VLQDTVNLLFNHPRQRNASRENLNLPEPQPTMGQPCSRPLKATGSPTGRLPGDQDLGEAQ
LSPPASSATLRRKRNLNGKVAPEKESGPRQILRSLVRLSVAAFAERNPVEELTMDSPPVQ
QISQLLSLLHQGQFQPKPNHRGNKYLAKPSSGSRSAVLDTEGPGARVGGQAELDQEEGLL
DPEEDLSVKQLLEEELSSLLDPHTGLALDRLSAPDPAWMARLSLSLTTNYRDNVCSPDAA
TSEEPRTFQTFGKAAGPELSPTGTRLASTFLSEMSSLLEMLLAQRSSVVPVEAASEVLRR
LSVCGRTLSLDLATSGALGTETQEGPGGKKGAKGRTGSSSSSRGL
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacttctgcagcttctgctggggctttgggggccaggtggctatttgttcctt
tcaggggaatgtcaggaggtggccactctcactgtgaaataccaagtatcagaggaagtg
ccatctggcacagtgatagggaagctatcccaggaattgggctggaaggagaggcatgag
ctggaggtagctgccttccaggtcttgcagctgcctcaagtgctccccattcaggtggat
gctgaggacggcttgctcagcactgggaggcggctagacagagagcagctctgccggcag
cgggatccctgcctggtttcctttgacgtgcttgccacagaggatttgactctgattcac
gttgagatccaggtgctggacatcaatgaccaccaaccgcagtttcccaaaggtgagcag
gagctggaaatctctgagagtgcctctctgcatacccggatccccctggacagagctgtt
gacccagacactggccccaacacactgcactcatacactctgtctcccagcgaacacttt
gccctggatgtcatcgtggggcctgatgagactaaatatgcagaactcgtggtggtgaag
gagctggaccgggaaatccactcattttttgatttggtgttaactgcctatgacagtggg
gacccccctaagtcaggcactagcctggtcaaggtcaatgtcctggactccaatgacaat
agccctgtgtttgctgagagctcgctggcactagaaatccaagaagatgctgcccttggt
actctcctcataaagttgactgccacagaccctgaccaaggccccaatggggaggtggag
tttttcctcagcaagcacgtgcctccagaagtgctagaaaccttcagtattgatgctaag
acaggccaagtcattctgcgtcaaacactagactatgagaagaatcctgcctatgaggtg
gatgtccaggcgagagacctaggtcccaatcccatcccagcccattgcaaagttctcatc
aaggttctggacgtcaatgacaatgccccgagcatccatgtcacatgggcctcccagtca
ccactggtgtcagaaactgttcccagggatagtttcattgctctcgtcatggcaaatgac
ttggactcaggaaataatggtctggtccactgttggctgagccaagagctgggccacttc
aggctgaaaaggaccaatggcaacacatatatgctgctaaccaatgccacgctggacagg
gagcagtggcccaagtatactctcactctgttagcccaagaccaaggactccagccctta
tcagccaagaaacagctcagcattcaaatcagtgatgccaatgataacgcacctgtgttt
gagaagagcaggtatgagatctccactagggaaaacaatcaaccctctcttcacctcatc
actgtcaaggctcatgatgcagacttgggcatcaatggaaaaatctcataccgcatccag
gactccccagtttctcacttggtagctattgatgcagacacaggagaggtcactgctcag
aggacactggactatgagcagatggccaggtttgagttccaggtgattgcggaggatagg
gggcagccccagcttgcatctagtgtctccatgtgtgtcagcctcctggatgccaacgat
aatgccccagaagtggttcagcctgtgctcagcaatggaaaagccagcctctcagtactt
gtaaatgcctccacgggctaccttctggtgcccatcgagactctcaatggcttgggtcca
gcagatgctgacatactaccaccagccacccacagccccccgccattccttttgatgacc
attgtggcaagggacgcagactcaggggcaaatggagagctcctctacagcattcggagg
ggtaacaaagcttgcctctttgtcctcagcccccacctggggcagctgttcatcaatgtc
accaatgccagtagcctcattgggagtgagtgggagctggagatagtggtagaggaccgt
ggcagcccctccttgcagacccaagccctgtgaaggnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnncgggaccctaagcacatccgtgctgacggtgatt
tgcctggttgtactggtggccattttcgggttgatcttggctctggtcatgtccatctgc
cgaacggagaagaaggacaaccgggcctacaactgtcgggaggctgagtccacttaccgc
caccagcccaagaggccccagaaacatattcagaagacggacatccaccttgtgcctgtg
ctcaggggccaggtgaatgagcctggtgaagttggacagccccacaaggacacaggcaag
gaagcgaatatgagcgaaatctgggacccctacctgcaggccccctttcacctcactccg
accttgtacaggaccctgcgtaaccaaggcaacctgggagaactagctgagagccaggag
gtgctgcaggacacagtcaacctcctttttaaccaccccaggcagaggaatgcctcccgg
gagaacctgaaccttcctgagccccagcccaccatgggccagccatgctcaaggcccctg
aaggctacaggcagccccactgggagactgcctggagaccaggatcttggggaggctcag
ctaagcccaccagcctcctcggcaaccctgaggcggaagcggaatctcaatggcaaagtg
gctcctgagaaagagtcaggcccccgtcagatcctgcggagcctggtccggctgtccgtg
gctgccttcgcagagcggaaccctgtggaggagctcaccatggattctccgcctgttcag
caaatttcccagctgctgtccttgctgcatcagggccaattccagcccaaaccaaaccac
cggggaaataagtacttggccaagcccagcagcggcagcaggagtgcagtgctagacacg
gaaggcccaggtgccagggttggtggccaggcagaactagaccaggaagaagggctcttg
gaccctgaagaagacctgtctgtaaagcagctgctagaagaagagctgtcgagcctactg
gacccccacacaggcctggccctggaccggctgagcgcccccgacccggcctggatggcg
aggctctctttgtccctcaccaccaactaccgcgacaacgtgtgttccccagacgctgcg
acctctgaggagcctcggaccttccagacgttcgggaaggcggcggggcccgagctgagc
cctacgggcacgcggctggccagcaccttcctttccgagatgagctcgctgttggagatg
ctgctggcgcagcgctccagcgtggtgcccgtggaggccgcctctgaggtgctgcggcgg
ctgtcggtctgcgggaggaccctcagtctggacctggccaccagcggggcgttgggcacg
gaaacccaggagggccctggtggaaagaagggggccaagggcaggaccggcagcagtagc
agcagcaggggcctgtga
DBGET
integrated database retrieval system
