Loxodonta africana (African savanna elephant): 100657877
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Entry
100657877 CDS
T04351
Name
(RefSeq) protocadherin beta-6
KO
K16494
protocadherin beta
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lav04515
]
100657877
Cell adhesion molecules [BR:
lav04515
]
Cadherins
Protocadherins
100657877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100657877
NCBI-ProteinID:
XP_003404603
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MAQTKAQLKKRQVESFIILMFLWEVGSESMQYSVLEEKESGTFVADLTKDLGLKVGELAA
RGARVVFKGNKQHLQLDPQTHNLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQAEL
RVRDINDHAPEFPTRKMVLKISEITTPGKTFPLKMAQDLDAGSNSLQSYTISPNPHFHVL
TRNRSDGRKIPELVLDKALDREEQPQLRLTFTALDGGSPPRSGTAEIQILVLDINDNAPV
FAQELYEVQVSENNPLGSLVVTVSATDLDAGSFGEVSYALFQVDDINQPFEINAITGEIR
LRRMLDFEEFQSHHVDVEATDGGGLSGKCSVVIKVLDMNDNAPELTMSSLTNPIPENLPE
VIVAVFSVSDADSGPNQQVICSIDDNLPFLLRPSIENFYTLVTEGELDRESRAEYNITIT
VIDLGTPRLKTEHKITVLVSDVNDNAPTFSQTSYTLFIRENNSPALHMGSVSATDRDSGS
NAQVTYSLLPPQDPHLPLASLVSINADNGHLFVLRSLDYEALRAFEFRVGAIDAGSPALS
SEALVRVEVVDDNDNSPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDSDSGQNAWL
SYQLLKATEPGLFSVWAHNGEVRTTRLLSERDAAKHRLVVLVKDNGELPMSATVTLHVLL
VDGFSQPYLPLPEMALNEAQADSLTVYLIIALASVSSLFLFSVLLFITVRLCRRNRAASA
GRCSVPEGHFPGHLVDVSGTGTLSHSYQYEVCLTGGSGTSEFKFLKPIFPNFPPQGTGRE
TKENSTSGNSFQFS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaacaaaagcacagctcaagaaaaggcaagtagagagctttattatattgatg
tttttatgggaggtgggttcagaatcaatgcagtattctgtgctggaggagaaagaaagt
ggcacatttgtggccgacttgacaaaggacctgggactcaaggtgggagagctggctgcg
cggggcgcccgggttgttttcaaggggaacaaacagcatttgcagcttgacccacagacc
cataatttgctgctaaatgagaaactggaccgggaggagctgtgtggatccactgagcca
tgcgtactacctttccaagtgttgctggaaaatcccttacagttttttcaggctgaactg
agggtcagagatataaatgaccacgccccagagttccccaccagaaaaatggtcctgaaa
atatcagaaattactacaccaggaaagacatttcctttgaaaatggcacaggatttagat
gctggcagcaacagccttcagagctacacaatcagccccaatccccactttcatgttctc
actcgcaatcgcagtgacggcaggaagatcccggagctggtgctggacaaagcgttggat
agggaggagcagccccaactcaggcttaccttcactgcgttagatggcggctctcctccc
cggtcaggaaccgcagagattcagatcctggtcttggacatcaatgacaacgctcctgtg
tttgctcaggagctctatgaggtgcaagtctctgagaacaaccccctaggctccctggtt
gtcaccgtgtcagcgacagatttagatgcaggatcctttggggaggtatcctatgcccta
tttcaggtcgatgacattaaccagcccttcgaaataaacgccatcacaggagaaattcgt
ctgagaaggatgttggattttgaggaatttcagtctcatcacgtggatgttgaggccaca
gatggcggtggactatcaggaaaatgttccgtagtcatcaaggtattggacatgaatgac
aatgcccctgaactgaccatgtcatcactcaccaaccccatccctgaaaacttgccagag
gttatagttgcagttttcagtgtttcagatgcagattctggacctaatcaacaagtcatt
tgttctatagatgacaatctccccttccttctaagaccatccatagagaatttctatacc
ctggtaacagaaggagagctggacagagagagcagagccgaatacaacatcacaatcacc
gttatcgacttgggtacccccaggctaaaaacagagcacaaaataaccgtgctggtctcc
gacgtcaatgacaacgctcccaccttctcccaaacctcctacaccctgttcatccgcgag
aacaacagccctgctctgcacatgggcagcgtcagcgccacagacagagactcaggctcc
aacgcccaagtcacctactcgctgctgccgccccaggacccgcacctccccctcgcctcc
ttggtctccatcaacgcagacaacgggcacctgttcgttctcaggtcgctggattacgag
gccctacgagcgttcgagttccgcgtgggcgcgatagacgcaggttctccagcgctgagc
agcgaggcgctggtgcgcgtggaggtcgtggacgacaacgacaactcgcccttcgtgctc
tacccgctgcagaacggttctgcgccctgcacagagctggtgcccagggctgccgaggcg
ggctacctggtgaccaaggtggtggcggtggacagcgactcgggacagaacgcctggctg
tcctaccagctgctcaaggccacggagcccgggctattcagcgtgtgggctcacaacggc
gaggtgcgcaccaccaggctgctgagcgagcgcgacgccgccaagcacagactcgtcgtg
ctggtcaaggataatggcgagctgccaatgtcggccaccgtcacgcttcacgtgctcctg
gtggatgggttctcgcagccctacctgccgctcccagagatggctctgaatgaggcccag
gccgactcgctcactgtctacttgatcattgcgttggcgtcggtctcgtcgctctttctg
ttctccgtgctcttgttcatcactgtgcggctgtgcagaaggaacagggccgcctcagcg
ggtcgctgctccgtgcctgagggccactttccgggccacttagtggatgtcagcggcaca
ggaactctgtcccatagctaccagtacgaggtgtgtctgacgggaggctcagggaccagc
gagttcaagttcctgaagccgattttccccaactttcctccccagggaactgggagggaa
acaaaggaaaactccacctctggaaacagcttccaattcagttaa
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