Loxodonta africana (African savanna elephant): 100658150
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Entry
100658150 CDS
T04351
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04141
Protein processing in endoplasmic reticulum
lav04210
Apoptosis
lav04217
Necroptosis
lav04218
Cellular senescence
lav04382
Cornified envelope formation
lav05010
Alzheimer disease
lav05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100658150 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100658150 (CAPN1)
04217 Necroptosis
100658150 (CAPN1)
04218 Cellular senescence
100658150 (CAPN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100658150 (CAPN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100658150 (CAPN1)
05022 Pathways of neurodegeneration - multiple diseases
100658150 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lav01002
]
100658150 (CAPN1)
Enzymes [BR:
lav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
100658150 (CAPN1)
Peptidases and inhibitors [BR:
lav01002
]
Cysteine peptidases
Family C2: calpain family
100658150 (CAPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calpain_III
Peptidase_C2
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
100658150
NCBI-ProteinID:
XP_023415370
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MEAVTFKKLGKGHAYSVTGAKQVNYRGQMVSLIRMRNPWGEVEWTGAWSDGSSEWNNIDP
YERQQLQVKMEDGEFWMSFRDFLREFTRLEICNLTPDALQSRSIRKWNTMLYEGTWRRGS
TAGGCRNYPATFWVNPQFKIRLEEVDDAEDDYGGRESGCSFVLALMQKHRRRERRFGRDM
ETIGFAVYEVPPQLVGQSAVHLKRDFFLANASRARSEQFINLREVSSRFRLPPGEYVVVP
STFEPNKEGDFVLRFFSEKRAGTQELDDQVQANLPDEQVLSEEEIDESFKALFRQLAGED
LEISVRELQTILNRIISKHKDLRTKGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIR
NYLAVFRKFDVDKSGSMSAYEMRMAIESAGFKLNKKLYELIITRYSEPDLAVDFDNFVCC
LVRLETMFRFFKLWTQIWMEL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgtcaccttcaagaagctgggcaagggtcatgcttattctgtgactggggcc
aagcaggtgaactaccggggccagatggtgagcctgatccggatgcggaacccctggggc
gaggtggagtggacaggagcctggagtgatggctcctcagagtggaacaacatagaccct
tatgagcggcagcagctccaggtcaagatggaggatggagagttctggatgtcattccga
gacttcttgcgtgagttcacccgcctggagatctgcaacctgacccctgacgcactccag
agccgttccatccgcaaatggaataccatgctgtacgagggcacctggcggcgggggagc
actgctgggggctgccgcaattacccagccactttctgggtgaacccccagttcaagatc
cggttggaggaggtggacgatgcagaagatgactacgggggtcgtgaatcaggctgcagc
tttgtgctcgctctcatgcagaagcaccgccgccgtgagcgccgcttcggccgcgacatg
gagacaatcggcttcgccgtgtacgaggtccctccacagctggtgggccagtcggccgtg
cacctgaagcgggacttcttcctggccaatgcttcaagagcccgctctgagcagttcatc
aacctgcgggaggtcagctctcgcttccgcctgccgcccggggagtacgtggtagtaccc
tccaccttcgagcccaacaaggagggcgacttcgtgctgcgtttcttctcggagaagagg
gcagggacacaggagctggatgaccaggtccaggccaatctccccgacgagcaagtgctc
tcagaagaggagattgacgagagcttcaaggccctcttcaggcagctggcaggggaggac
ttggagatcagtgtcagggagctgcagaccatcctcaacaggatcattagcaaacacaaa
gacctgcggaccaagggcttcagcctggagtcctgccgcagcatggtgaacctcatggac
cgtgacggcaacgggaaactgggcctggtggagtttaacatcctctggaaccgcatccgg
aattacctggccgtcttccgaaagtttgacgtggacaagtccggcagcatgagtgcctac
gagatgcggatggccatcgagtctgcaggcttcaagctcaacaagaagctgtatgagctc
atcatcacccgctattcggagcctgacctggctgttgactttgacaacttcgtgtgctgc
ctggttcgcctggagaccatgttccggtttttcaaactctggacacagatctggatggag
ttgtga
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