Loxodonta africana (African savanna elephant): 100658301
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Entry
100658301 CDS
T04351
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04068
FoxO signaling pathway
lav05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
100658301 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
100658301 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lav04121
]
100658301 (RAG1)
Enzymes [BR:
lav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100658301 (RAG1)
Ubiquitin system [BR:
lav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100658301 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100658301
NCBI-ProteinID:
XP_003412322
UniProt:
G3UKA0
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MAVSLPPSLGLNSAPEEIQHPHIKFSEWKFKLFRVRSFGKSSEESQTGKKDSSEGRPSLE
QSPAVLDKAVGQKPALTQPALKIHSNFLKKSCDNGKARDTAIHQANLRHLCRICGNSFKT
DGHNRRYPVHGPVDGKTQGLLRKKEKRVTSWPDLIAKVFRIDVKADVDLIHPTEFCHNCW
SIMHRKFSHAPSELYFPRNATMEWHAHTPSCDICHAARRGLKRKSHQPSLQLSKKLKTVA
DRARQACQCKRRAQTRISNKEVMKRIANCSKIHLSTKLLAVDYPVHFVKSISCQICKHIL
ADPVETSCKHVFCRICILRCLKVMGSYCPSCQYPCFSTDLESPVKSFLSILNSLMVKCPA
KECSEEVSLEKYNHHVSSHKESKETFVHINKGGRPRQHLLSLTRRAQKHRLRELKLQVKA
FADKEEGGDVKSVCLTLFLLVLRARNEHRQADELEAIMQGRGSGLQPAVCLAIRINTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSSTNIGIIDG
LSGLSSSVDDYPVDTIAKRFRYDSALVSALMDMEEDILEGMKSQDLDDYLNGPFTVVVKE
SCDGMGDVSEKHGSGPVVPEKAVRFSFTIMNITVAQGSQNVKVFEEAKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKSSKLMLEMGGILRTFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVFHSITRSHAENLERYEVWRSNPYHESVEELRDRVK
GVSAKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEAYKNPDASKEERKRWQATLDKHL
RKRMNLKPIMRMNGNFARKLMTKETVEAVCELIPSEERHEALRELIDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNALKNSGFTMN
SQASLGDPLGLEDSLEIQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttctctgccacccagcctgggactcaattctgccccagaagaaattcagcac
ccacatattaaattttcagaatggaaatttaagctcttcagggtgagatcttttggaaag
tcatctgaagaatctcaaacaggaaagaaggattcctcagaggggagaccctctctggaa
caatcgccagcagttctggacaaggctgttggtcagaagccagcgctgactcaaccagca
ttaaagattcactctaactttttgaaaaagtcctgtgacaatgggaaagcaagagacaca
gcgatccaccaagccaaccttcgacatctgtgccgcatctgtggaaattcttttaaaact
gatgggcacaacaggagatatccagtccacggccccgtggatggtaaaacccaaggcctt
ttaagaaagaaggagaagagagtcacttcctggccagatctcattgccaaggtttttcgg
atcgacgtgaaggcggatgttgacttgatccaccccactgagttctgccataactgctgg
agcatcatgcacaggaagtttagccatgccccatctgagctttacttccccaggaatgca
accatggagtggcatgcccacacaccatcctgtgacatctgccatgctgcccgtcgggga
ctcaagaggaagagtcatcagccaagtctgcagctcagcaaaaaactcaaaactgtggct
gaccgagcaagacaagcctgccagtgtaagagaagagctcagacaaggatcagcaataag
gaagtcatgaagaggattgccaactgcagtaagatacaccttagcaccaagctccttgca
gtggattacccagtgcactttgtgaaatctatttcctgccagatttgtaaacacattttg
gctgaccccgtggagaccagctgtaagcatgtattttgcaggatctgcattctcagatgc
ctcaaagtcatgggcagctattgtccctcttgccaatatccctgcttctctactgacctg
gagagtccagtgaagtcctttctgagcatcctaaactctctgatggtgaagtgtccagca
aaagagtgcagtgaggaggtcagcttggaaaaatataatcatcatgtctcaagccacaag
gaatcaaaagagacttttgtgcatattaacaaagggggccgaccccgccaacatctcctg
tccctgacccggagagctcagaagcaccgtctgagggagctcaagctgcaagtcaaggct
ttcgctgacaaagaagaaggtggagatgtgaagtctgtgtgcctaaccttgttcctgctg
gtactgagggcgaggaatgagcacagacaagctgatgagctggaggccattatgcagggc
cgggggtctggcctgcagccagctgtctgtttggccatccgtatcaacaccttccttagc
tgcagccagtatcacaagatgtacaggactgtgaaagccatcacagggaggcagattttt
cagcctttgcatgcccttcggaatgctgagaaggtccttctgccaggctaccatcccttt
gagtggcagccacctctgaagaatgtgtcttctagtactaatataggcatcattgatgga
ctgtctggactatcctcctctgtggatgattacccagtggacaccattgcaaagagattc
cgctatgactcagctttggtgtctgctttgatggacatggaagaagacatcttggaaggc
atgaaatctcaagaccttgatgactacctaaatggccccttcactgtagtggtgaaggag
tcttgtgatggaatgggagatgtgagtgagaaacacgggagtggaccagtagtaccagaa
aaggcagttcgtttttcattcacaatcatgaatattactgtagcacaaggctcacagaat
gtgaaggtgttcgaggaagccaaacctaactctgaactgtgttgcaagccattgtgcctt
atgctagcagatgagtctgatcacgagaccctgactgccatcctgagccctctcattgca
gagagggaggccatgaagagcagcaaattaatgcttgagatgggaggcatcctcaggact
ttcaagttcatctttaggggcactggatatgatgaaaaacttgtccgggaagtggaaggc
ctcgaagcttctggctcagtctacatttgtaccctttgtgatgccacccgcctggaagcc
tcgcaaaatcttgtcttccactccatcaccagaagccatgctgagaacctggagcgctat
gaggtctggcgttccaacccctaccacgagtctgtggaagaactgagagaccgggtgaaa
ggggtctcagccaaacctttcattgagacagttccttccatagatgcactccactgtgac
attggcaatgcggctgagttctacaagattttccagctagagataggtgaggcgtataag
aatcccgatgcttccaaagaggaaaggaaaagatggcaggccacattagacaaacatctc
cgaaagaggatgaacctaaagccaatcatgaggatgaatggcaactttgccaggaagctt
atgaccaaagagactgtcgaagcagtttgtgaattaattccctctgaggagaggcacgag
gcgctgagggagctgatagacctttacctgaagatgaaacccgtttggcgatcatcatgt
cctgctaaagagtgcccagaatctctgtgccagtacagtttcaactcacagcgttttgct
gagctcctctctaccaagttcaagtatagatatgagggcaaaatcaccaattattttcac
aaaaccctggcacatgtccctgaaattatcgagagggatggatctatcggggcatgggca
agtgagggaaatgagtctggcaacaaactgttcagacgcttccggaaaatgaatgccagg
cagtccaagtgctatgaaatggaagacgtcctgaaacaccactggttgtacacctccaaa
tatctccagaagttcatgaatgctcataatgcattaaaaaactctgggtttaccatgaac
tcgcaggcaagcttaggggacccattaggcctagaggactctctggaaattcaagattca
atggaattctaa
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integrated database retrieval system
