Loxodonta africana (African savanna elephant): 100658422
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Entry
100658422 CDS
T04351
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lav04131
]
100658422 (VPS53)
Membrane trafficking [BR:
lav04131
]
Protein recycling
Others
EARP complex
100658422 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
100658422 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
Sec8_N
Laminin_II
Syndetin_C
hAT-like_RNase-H
NBD94
COG3_N
NFRKB_winged
COG5_N
FUSC
XhlA
MCPsignal
Motif
Other DBs
NCBI-GeneID:
100658422
NCBI-ProteinID:
XP_003416853
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MMEEEELEFVEELEAVLQLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACLVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPREWYMTERIAVEFCHVTRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGFLAK
RFSGCTLTDGTLKKLESPPPSTNPFLEDEPAPEMEELAMEKGDLDQPKKLKAPDNPFHGI
VSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGLPKPNTDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTITSLLKEKEGSE
VAKFTIEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISS
SIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLTDCNTETFQKILDMKGLKR
SEQSSMLELFRQRLPTPPSGAEGSSSLSLMAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaggaactggagttcgtggaggagctggaagccgtgttgcagctcacg
cctgaggtgcaactcgccatagagcaggtatttccgagccaagatcctctcgatcgagca
gatttcaacgctgtggaatatatcaataccctgttcccaacggaacaatctctggcaaac
atagatgaagtcgtgaataaaattagactgaaaataaggagactggatgacaatattcga
actgtcgtgagaggtcaaacaaatgtggggcaggatggaaggcaagcacttgaagaggcc
cagaaagcgattcaacaactcttcggcaaaatcaaagatatcaaagacaaagcagaaaaa
tcagagcaaatggttaaagaaatcacccgcgatattaagcagttagaccatgccaaacgc
catctgaccacttcaatcacaacgctgaaccacctgcacatgttggcaggtggcgtcgat
tccctcgaggctatgaccaggcgaagacaatacggagaagttgctaatctccttcagggt
gtgatgaacgttctggagcacttccacaaatatatgggaattccacagattcggcagctt
tctgaaagagtgaaggctgcccagactgagttaggacagcaaatcctggccgattttgaa
gaagcatttccttcccagggtaccaagaggcctggaggacccagcaatgtcttaagagat
gcatgtctggttgctaatattttggaccccagaatcaaacaggaaatcatcaaaaagttt
attaagcagcatctgtcagagtatctagtactttttcaagaaaaccaagatgttgcctgg
ttggacaaaatcgacagacgctatgcctggataaagcgccagcttgtggactatgaggag
aaatatggccgcatgtttccacgtgagtggtacatgaccgagaggattgcagtagaattt
tgtcatgtcacaaggacagaacttgccaagattatgcgtaccagagctaaagaaattgag
gtgaaattgcttctttttgctattcagagaacaactaactttgagggctttcttgcgaaa
cgcttctccggctgcaccctgacagatggaaccctgaagaaacttgagtccccaccccca
tccaccaatcccttcctggaagatgaaccagcaccagaaatggaggaattggccatggag
aaaggcgatttagaccaaccaaagaagcttaaagccccagacaatccatttcatggcatt
gtttccaagtgttttgagcctcatctctacgtgtatatcgagtcccaggacaaaaacctt
ggtgagctgatagatcggtttgtggctgatttcaaagcccaggggctcccgaagcccaac
actgatgaagggggggccgtgctccccagctgtgctgacctcttcgtgtactacaagaag
tgcatggtgcagtgctctcagctcagcaccggggagcccatgattgcgctgaccaccatt
ttccagaagtacctccgggaatatgcctggaaaatcctctctggcaacctgcccaaaacc
acaagcagcagtggagggctgaccatcactagtctcctcaaggagaaggagggctcagaa
gtagccaagttcactatagaagagctctgtctcatctgcagcatcctgagcacagcagag
tactgtctggccaccacccagcagctggaagaaaaactcaaagaaaaagttgatgtaagc
ctgactgaacgcatcaatctgactggagaaatggacacattcagcactgtcatctctagc
agtattcagttgttggttcaggatctcgatgctgcctgtgatcctgccctgaccgccatg
agcaagatgcagtggcagaatgtggagcacgttggtgaccagagcccctacgtcacctct
gtcattcttcacattaaacagaacgtccccatcatccgtgacaacctcgcttccacacgg
aagtacttcactcagttctgcattaaatttgccaactccttcattcccaagttcatcacc
cacctcttcaagtgcaaaccaattagcatggtgggagcagaacagctgctgctggacacc
cattccctgaagatggtgctgctcgacctaccctccatcggctcacaggtggtgaggaaa
gcccctgccagttacaccaaaatcgttgtgaaaggcatgacccgggccgagatgatcctc
aaggtggtgatggcacctcatgagccgccagtggtgtttgtggacaactacatcaaactt
cttacagattgcaacacagaaaccttccagaagatactggacatgaaggggctgaagaga
agcgagcagagcagcatgctggaactcttccgccagaggctccccaccccgccctcgggg
gcagaaggctccagctcgctgtccctgatggctcccactcccgaacaggaatcatctcgc
atccggaaactagagaaactaattaaaaagagactgtag
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