KEGG   Loxodonta africana (African savanna elephant): 100658509
Entry
100658509         CDS       T04351                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
lav  Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:lav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lav04121]
    100658509 (HLTF)
   03400 DNA repair and recombination proteins [BR:lav03400]
    100658509 (HLTF)
Enzymes [BR:lav01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100658509 (HLTF)
Ubiquitin system [BR:lav04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100658509 (HLTF)
DNA repair and recombination proteins [BR:lav03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    100658509 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_2 RING_XB3-XBAT31 zf-RING_UBOX zf-RING_5 DEAD zf-ANAPC11 zf-C3HC4_4 Prok-RING_4 HDA2-3 zf-Nse zf-rbx1 zf-RING_6
Other DBs
NCBI-GeneID: 100658509
NCBI-ProteinID: XP_003416211
LinkDB
Position
Unknown
AA seq 1008 aa
MSWMFRRDPVWKYLQTVQYGVHGNFSRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLF
GTLRGHVVGLRYYTGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHVKKDLAAALA
YIMDNKLAQVEGVVPFGANNAFTMPLHMAFWGKEENRKAVLDQLKKHGFKLIPPPKTLGF
SVESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTHEMEPAEAIETPL
LPHQKQALAWMVSRENSEDLPPFWEQRSDLYYNTITNFAEKDRPEDVHGGILADDMGLGK
TLTAIAVILTNFHDGTPLPVERIKKNQLKKECNVNSESVKLEGNTSEKADGLIKEGSRCS
KESSISDIKEKNKYPMSEFSSSRPKRRKTVDKYMESSDSEEFEISELPQKTKGKLKNAKS
ETKSREKAGSSKIKEDSEFACALTSSTPTTKKKMLKKGVSAAEESKKTDLGEKPRTTLII
CPLSVLSNWIDQFGQHIKSEVHLNFYVYYGPDRIRDPILLSKQDIVLTTYNILTHDYGTK
GDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLS
FLKLKPFLDREWWHRTIQRPVTMGDEGGLRRLQSLIRNITLRRTKTSKIKGKPVLELPER
KVFIQHIMLSDEERKMYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHL
LTSAASSSGPTGDDTPEELRKKLIRKMKLVLSSGSDEECAICLDSLAAPVITHCAHVFCK
PCICQVIQNEQPNAKCPLCRNNIDGNNLLECPPEELVSNTEKMTSTEWMSSSKINALMHA
LIDLRTKNPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTE
AGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFI
VKDSVEENMLKIQNTKRELAAGAFGAKKPNANEVKQAKINEIKTLIDL
NT seq 3027 nt   +upstreamnt  +downstreamnt
atgtcctggatgttcaggagagatcctgtttggaagtacttgcagactgtccagtatgga
gtccatggaaatttttcacgcctttcataccctactttctttccccgttttgaattccaa
gatattatccctccagacgacttcctaactagtgatgaagagctagattctgttttattt
ggaactttgagaggtcatgttgttggactacgctattatacaggagtagttaataataat
gaaatggttgctttacaacgagagcctaataacccctatgataagaatgcgattaaagta
aacaacgtgaatggaaatcaggttggccatgttaagaaagatcttgcagctgctttggcc
tatatcatggacaacaagttggctcaagttgaaggggtagttccttttggtgcaaacaat
gcttttaccatgcctctccatatggctttttggggaaaagaagaaaatagaaaagcagtt
ttagatcagctgaagaaacatggatttaaactgattcctccaccaaaaactttaggattc
agtgtggaaagtggttggggctctggaagagcgggaccaagctacagtatgccagttcac
gctgcagtgcagatgacgactgaacagcttaagacagaatttgacaaattgtttgaagat
ttgaaagaagatgataaaactcatgaaatggaaccagctgaggctattgaaacaccatta
cttccacatcaaaagcaagccctggcttggatggtttcacgggaaaatagtgaagatctt
ccacccttttgggaacagcgaagtgatttgtactataataccataacaaattttgctgag
aaggaccgaccagaagatgtccacggaggaattttggctgatgatatgggtttgggaaaa
actcttacagccattgctgtaattcttaccaatttccatgatggcacaccccttcctgtt
gaaagaattaaaaagaatcaactgaagaaggaatgtaatgttaacagtgaatctgtgaaa
cttgaaggaaataccagtgaaaaagcagatggactaatcaaagaaggatctagatgtagc
aaagaatccagtatttcagatatcaaggaaaagaataaataccccatgtcagaattttct
agctcccgccccaaaagaagaaaaaccgttgacaagtatatggaaagcagtgattcagag
gaattcgaaataagtgaattaccacagaaaacaaaaggcaaactgaaaaatgcaaagtca
gagactaaaagcagggaaaaggcaggctcttcgaagattaaagaggattcagagtttgca
tgtgcacttacatcatctacccctacaacaaaaaagaaaatgttgaaaaagggagtgtct
gcagcggaggagtcaaagaaaactgatcttggagagaaaccaagaacaacactgatcatc
tgtccactttctgtgttaagcaactggattgaccaatttggacaacatataaaatcagag
gtgcacttgaatttctatgtttattatggtcctgatcgtattagagaccccattttgctt
tcaaaacaggatattgttttgaccacatacaatattttaactcatgactatgggactaaa
ggggatagtccattacacagcatacgatggctcagagtgattctggatgaaggacatgcc
atacgaaatccaaatgcccaacagacaaaagctgtactggatttagaagcagaaagaaga
tgggtattaacaggtactccaatccagaattccttaaaggacttgtggtctcttctttcc
tttctaaaacttaaaccatttcttgatagagaatggtggcacagaacaatacagcgtcct
gttacaatgggcgatgaaggaggacttaggcgtttacagtccctaattaggaatattaca
cttagaagaacaaagacaagcaaaattaaagggaaacctgttttggagttaccggaacgt
aaagtatttattcagcacattatgctttccgatgaggagaggaagatgtatcagtctgtg
aaaaatgaaggcagagctacaattgggaggtattttaatgaaggaactgtcctggcacac
tacgcagacgtcttgggtcttttgcttagattacggcagatctgttgtcatactcaccta
cttacaagtgcagcttcttccagtggccccacaggagatgacacacctgaagaacttcga
aagaaattaataaggaagatgaagttagttctgagttcaggttcagatgaagaatgtgca
atttgcttggattctttagcagctcctgtgataacacattgtgcacatgtgttttgtaaa
ccttgtatttgccaagtcattcagaatgagcagcctaatgctaaatgccctttatgcaga
aataatatagatggaaacaatttattagaatgtcctccagaagaattagtatccaacact
gagaagatgactagtacagaatggatgtccagttcaaagattaatgctttaatgcatgca
ttgattgacttaagaacgaagaatcccaacataaaaagtttagttgtttctcaatttaca
acgttcctctctttaatagaaacaccacttaaagcctctggattcgtatttactcgtctg
gatggttctatggcccaaaagaaaagagttgaatcaattcagtgttttcaaaatactgaa
gcaggatctccaactatcatgcttctgtctttaaaagcaggtggagttggtttgaatctt
tctgcagcttctcgagtgtttttaatggatccggcctggaatcccgctgccgaagaccag
tgctttgacaggtgccaccgacttggccagaagcaagaagttatcatcacaaaattcatt
gtaaaggactctgttgaagaaaatatgctgaaaatacaaaacacgaagagagaacttgca
gctggagcttttggagctaaaaagccaaatgctaatgaagtgaagcaggctaaaatcaat
gaaatcaaaactttaatcgatttataa

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