KEGG   Loxodonta africana (African savanna elephant): 100658613
Entry
100658613         CDS       T04351                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1 isoform X2
  KO
K12825  splicing factor 3A subunit 1
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100658613 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lav03041]
    100658613 (SF3A1)
Spliceosome [BR:lav03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    100658613 (SF3A1)
 Complex B
    100658613 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    100658613 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 100658613
NCBI-ProteinID: XP_003419113
UniProt: G3SLR5
LinkDB
Position
Unknown
AA seq 793 aa
MPAGPVQAVPPPPPVATEPKQPTEEEASSKEDSTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQATQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLVKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDEKQDKAEEPPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNEIPQQPPPPSSATSIPSSAPPITSVPRPPTMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPTSKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAI
IHLALKERGGRKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgccggctggacccgtgcaggcggtgcctccgccgccgcccgtggccaccgagcccaaa
cagccaacagaagaagaagcatcctcaaaggaagattctaccccttccaagccagtggtg
gggattatttaccctcctccagaggtcaggaacattgtcgacaagactgctagctttgtg
gccagaaatgggcctgaatttgaagctaggatacgacaaaatgagatcaacaaccccaaa
ttcaactttctgaaccccaatgacccttaccatgcatactaccgccacaaggtcagcgag
ttcaaggaggggaaagctcaggagccctcagctgccattcccaaggtcatgcagcagcag
caacaagccacccagcagcagctgccccagaaggtccaagcccaggtgatccaagagacc
attgtgcccaaagagccccctcctgagtttgagttcatcgcagatccaccctccatctca
gcctttgacctggatgtggtgaagctaacggctcagtttgtggcccggaatgggcgccag
tttctgacgcagctgatgcaaaaagaacagcgcaactaccagtttgactttcttcgcccg
caacatagcctcttcaactactttacaaagctggtggagcagtataccaagatcttgatt
ccaccaaaaggcttacttgtaaagctcaagaaagaagctgaaaatccccgagaagttctg
gatcaggtgtgctaccgagtggagtgggccaagttccaggaacgtgagagaaaaaaagag
gaggaggagaaggagaaggagcgggtggcctatgctcagattgactggcatgatttcgtg
gtagtggaaacagtggacttccagcccaacgaacaagggaacttccctcctcccaccacc
cctgaggagctgggggcccgaatcctcatccaggagcgctatgagaagtttggggagagt
gaggaggttgagatggaggtcgagtctgatgaggaggacgagaaacaggataaggcagaa
gagcctccttcccagcttgaccaggacacccaagtgcaggacatggatgagggttcagat
gatgaagaagaagggcagaaagtgcccccacccccagagacacccatgcctccacctctg
ccccctactccagaccaagtaattgtccgtaaagactatgaccccaaagcatccaagccg
ctgcctccagctcctgctccagatgagtatcttgtgtcccccatcacgggggagaagatc
cccgccagcaaaatgcaggagcacatgcgcattgggcttcttgacccccgctggctggag
cagcgcgatcgctccatccgagagaagcagagcgatgatgaggtgtatgcgccaggcctg
gatattgagagcagcttaaaacagttggctgaacggcgtaccgatatcttcggtgtggag
gaaacagccattggtaagaagatcggtgaggaggagatccagaagccagaggaaaaggtg
acctgggatggccactcgggcagcatggcccggacccaacaggctgcccaggccaatatc
accctccaggagcagattgaagccatccacaaggccaagggcctggtgccggaagacgac
accaaagagaaaattggccccagcaagcccaatgaaatcccccagcagccaccacctcca
tcctcagccaccagtatccccagctcagccccacccatcacctctgtgccccgaccaccc
acgatgccgcctcctgtccgcaccacagtggtgtctgcagtgcccgtcatgccccggccc
ccgatggcatccgtggtccgcttgcccccaggctcagtgatcgcccccatgccacccatc
atccacgcgcccaggatcaacgtggtgcccatgcctccctcagcaccccctattatggca
ccccgcccaccccccatgattgtgccaacagcctttgtgcctgctccacctgtggcaccc
gtcccagctccggccccaatgccccctgtccaccctccacctcccatggaagatgagcct
acctctaagaaactgaagacagaagacagtctcatgcctgaggaggagttcctgcgcaga
aacaagggtccggtgtccatcaaagtccaggtgcccaacatgcaggataagacggaatgg
aaactgaatgggcaggtgctggtcttcaccctcccactcacagaccaggtctctgtcatc
aaggtaaagattcatgaagctacaggcatgcctgcagggaaacagaagctacagtatgag
ggcatcttcatcaaggattccaactcgctggcgtactataacatggctaacggtgccatt
atccacctggccctcaaggagagaggtgggaggaagaagtag

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