Loxodonta africana (African savanna elephant): 100658653
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Entry
100658653 CDS
T04351
Symbol
SHANK1
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100658653 (SHANK1)
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Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
SH3_2
SH3_1
SH3_9
Defensin_2
Motif
Other DBs
NCBI-GeneID:
100658653
NCBI-ProteinID:
XP_023399844
LinkDB
All DBs
Position
Unknown
AA seq
1013 aa
AA seq
DB search
MPVVLVTGLKKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIR
TLCLGGAHIDFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVG
GDPRCCELLLYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTAL
HICALYNKETCARILLYRGANKDVKNNNGQTPFQVAVIAXNFELGELIRNHREQDVVPFQ
ESPKYAARRRGPPGAGLTVPPALLRANSDTSMALPDWMVFSAPGTSSSGAPGPTSGPQGQ
SQPSAPSTKLSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGT
GGSGGPGGSLGSRGRRRKLYSAVPGRSFMAVKSYQAQGEGEISLSKGEKIKVLSIGEGGF
WEGQVKGRVGWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPSTPAGT
LWSCRGIPPNMRPPPQSPLSVGVHGSHCVADVACRSVVVGCLSPPGASLAGGIPAGQWGL
VRASLHAVARHLCDEHGGRGQGAFSPRELMAGPPPSHFSAPQQAKRLPPPAISLRSKSMT
SELEEMEYEHQPAPMPSMEKKRTVYQMALNKLDEILAAAQQTISASESPGPGGLASLGKH
RPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSIGAAAEDDRPYLAPPAMKFS
RSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSLRGGPFNPSSGVTHPASSPSS
FDGPAPPDTRVGGREKSLYHSGPLPPAHHHPPHHHHHHAPPPWAHQKDAHAVLGSKKEMA
LLTPSKLRGRALGSSGGLRPGPSSGLRDPVTPTSPTVSVTGAGTDGLLALSGCAGPPTAG
VAGGPLSVEPEGPPMPLPTASSLPRKLLPWEEGPGPPPPPLPGPLAPPQASALATVKASI
ISELSSKLQQFGGSTAAGGALPWARGGSGGSGDSHHGGASYVPERTSSLQRQR
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgttcttgtgacggggttgaagaagttcctggagtatgtgcagctcgggacg
tccgacaaggtggcacggctgctggacaaggggctggaccccaattatcatgactcggat
tcgggagagacccctttgacgctagctgcgcagaccgaaggctccgtggaggtgattcga
accctgtgcctgggcggggcccacatcgacttccgggcgcgggatggcatgacggcgctg
cacaaagccgcgtgcgcacgccattgccttgctctcacggcacttctggaccttgggggc
tcccccaactacaaggaccgccgggggctgacccctctgttccacacggctatggtgggg
ggcgaccctcgctgctgtgagctgctactgtacaacagagcccagctgggcatcgctgat
gagaacggctggcaggagatccaccaggcctgccagcggggtcactcccagcacctggaa
cacctgctcttctatggggctgagcccggagcccagaacgcctcggggaacacagcactg
catatctgcgccctctacaacaaggagacctgcgccaggatcctcctgtaccgaggggcc
aacaaggacgtgaagaataacaatggacagacccccttccaggtagcagtgatcgctngg
aattttgagctgggggagctaatccgaaaccatcgagagcaggatgtggtgcccttccag
gagtcccccaagtatgcagcccggcggcgaggacccccgggtgcagggctgacagtgccc
cccgcgttgctgcgagccaacagtgacaccagcatggccctgcccgactggatggtcttc
tcagccccagggacctcgtcctctggggcccccggcccaacttcagggccccagggccag
tcacagccctcagcccccagcaccaagctcagcagcgggacactccgaagtgccagcagc
ccccggggagcccgggcccgctccccctcccgtgggagacaccctgaggaggccaagagg
cagccccgtggacggcccagctccagcgggacgcccagagaagggccggccgggggcaca
gggggctcagggggccctgggggctccctgggcagtcgcgggagacggaggaaactctac
tcggctgtacctggacgctctttcatggcggtgaagtcataccaggctcaaggcgagggg
gagatctccctgagcaagggcgagaaaatcaaagtgcttagcatcggggaaggaggcttc
tgggaaggtcaagtcaaaggtcgtgttggctggtttccctctgactgcctggaagaggtg
gcaaaccgctcccaggaggggaagcaagaaagccgcagcgacaaggcaaagagactcttc
cgacattatactgtgggctcctacgacagcttcgatgccccaagcacccctgctggaacc
ctgtggtcctgccgtggtatccctcctaacatgcgtcccccgccccagtctcccctctcc
gtcggtgtccatggctcccactgtgttgcggacgtggcgtgtcggtctgtggtggtgggc
tgcttgtcccctcctggggcctctctcgccggtggcatccctgccgggcagtggggcttg
gtccgcgcgtccctgcacgcggtcgcgaggcatctgtgtgatgagcacggagggagaggt
caaggggccttctcccccagggagctgatggctggccctcccccctcccatttttcagca
cctcagcaggcgaagaggctcccacccccggccatctccctgcgttccaagtccatgacc
tcggagctggaggagatggagtacgagcaccaacctgcaccaatgcccagcatggagaaa
aaacggaccgtgtatcagatggctctcaacaaactggatgaaatcttggcagcagctcaa
cagaccatcagtgcaagcgagagtcctgggcctggtggcctggcgtccctgggcaaacac
cggcccaagggcttctttgccactgagtcgagcttcgatccccatcaccgctcccagccg
agttacgaacgtccttcatacctgcccccaggacctgggcttatgctccggcaaaaatct
atcggggctgctgcggaggatgacagaccctacctagcgcccccagccatgaagttcagc
cgcagcctatctgtgcctgggtcggaggacattcctccgccgcccaccacgtcccctcca
gagcccccctacagcacaccacctgccccttcctcctctggccgcctcaccccctccctc
cggggaggccccttcaaccccagctcaggggtcacccacccagcctcctccccctcctcc
tttgatgggcccgcccctcccgacacccgtgtggggggccgggagaagagcctataccac
agcggacccctgccccctgcccaccaccacccgccgcaccaccaccaccaccacgccccg
ccgccgtgggcccaccaaaaagatgcccacgcagttttgggaagcaagaaagaaatggcc
ctcttgacaccctctaagctcaggggaagggcactggggagcagcggaggcctgcggccc
ggccccagtagtggactccgggacccggtcacccccaccagccccactgtttcagtgaca
ggggctggaaccgatggactgctggccctgagtggctgtgcaggacccccgacagcaggt
gtggccgggggtcccttgtctgtagaaccagaaggcccacccatgcccttgccaacagcc
tcctccctgcctcgaaagctgctaccttgggaggagggtccaggcccaccaccaccaccc
ctgcccgggcccttggccccacctcaagcctcagccttggcgacagtcaaagccagcatc
atcagtgaactcagctccaagctccagcagtttgggggctccacagcagctggtggcgct
ctgccctgggcccggggaggcagcgggggaagcggggacagccaccatgggggagccagc
tatgtacctgagaggacttcctccctgcagcggcagaggtga
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