Loxodonta africana (African savanna elephant): 100658695
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Entry
100658695 CDS
T04351
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X5
KO
K12879
THO complex subunit 2
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03013
Nucleocytoplasmic transport
lav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100658695 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
100658695 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100658695 (THOC2)
03041 Spliceosome [BR:
lav03041
]
100658695 (THOC2)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100658695 (THOC2)
Spliceosome [BR:
lav03041
]
Complex C
Other components
EJC/TREX
100658695 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100658695 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
100658695
NCBI-ProteinID:
XP_003414809
UniProt:
G3SRS8
LinkDB
All DBs
Position
Unknown
AA seq
1593 aa
AA seq
DB search
MAAATVVVPAEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLNDVSEFREDMPSILADVFCILDIETNCLEEKNKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSEKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPFYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVTALQNKRAPKQ
AENFEDLRRDVFHMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDREKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHISKVWDDISPQFYATFWSLTMYDLAVPQTSYE
REVNKLKIQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKIYQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASV
QNGPGGGPSSSSIGSISKSDESSTEETDKSRERSQCGVKAVNKASNATPKGNSSNGNSGS
TSNKTVKENDKEKAKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERANKDEKARETKER
TPKSDKEKEKFKKEEKAKDEKFKTVVPIVESKSTQEKEREKEPSRERDIAKEMKSKENVK
GGEKTAVPGSLKSPVPRSDIAEPEREQKRRKIDSHPSPSHSSTVKDSLIELKESSAKLYI
NHTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVPPDLTKRR
KEENGTMGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGSDSFKSEKMDKISSGGKKE
SRHDKEKIEKKEKRDSSGGKEEKKHHKSSDKHR
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaactgtggtggttcccgcagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgccgaatcctcagtgaaaataaaagccatgatagttca
acatatagagatttccagcaagccctctatgagttatcatatcatgtcattaagggaaat
ctaaagcatgaacaggcatctaatgttcttaatgacgttagtgaatttcgtgaggatatg
ccctccattcttgccgacgtattctgcatattagatattgagacaaattgtttagaagaa
aaaaacaaaagagactattttactcagttggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgtctggatccagaaacactggaatcattggggcttatcaaacaa
tcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataaacagcaa
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacacgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatgga
gagactccatcatctttatacagagttgcagcagtacttctccagtttaatcttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacataaa
cgagaaatagtggaagctaagcaaattgttagaaaacttacaatggttgtgttgtcttcc
gaaaaaattgatgagcgagaaaaagaaaaggaaaaagaagaggagaaagtagagaagcca
cctgacaaccaaaaacttggtttgttggaagccttgttaaagatcggtgattggcagcat
gcacagaacattatggatcagatgcctccattctatgcagcttcacataagctaatagcc
cttgctatttgcaaactcattcacataactattgagcctctctaccgaagagttggagtt
cctaaaggtgctaaaggctcacctgttactgctttgcaaaacaagagagcaccaaaacaa
gcagagaactttgaagatttgagaagggacgtattccatatgttctgttatcttggtcct
cacctttctcacgatcccattttatttgcaaaagtggttcgcataggcaagtcatttatg
aaggagtttcagtctgatggaagcaaacaagaagatagagagaaaacggaagttatcctt
agctgtttgcttagcattactgaccaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccatatcagcataga
tatcgtctgtatggccagtggaagaatgaaacttataacagtcacccacttttagtaaaa
gttaaagctcaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat
gtgaaaccttccggaagacaaattgggaagttgagccacagcaatccaaccattttgttt
gattatatcttgtcacaaatacagaagtatgataacttaataacacctgtagtagattca
ttgaaatacctcacttcattaaattatgatgtcttggcctattgtatcattgaagcttta
gctaatccagaaaaggagagaatgaaacatgatgacacaaccatctcaagctggcttcag
agtctggctagtttctgcggtgcagtttttcgtaaatacccaattgatcttgctggtctt
cttcaatatgtcgccaatcagctaaaggcaggcaaaagttttgacctgctaatattgaaa
gaagtggtacaaaaaatggcaggaatagaaattacagaagaaatgacaatggagcaacta
gaggctatgactggtggagaacaacttaaagctgagggtggctattttggccagatccga
aacactaaaaaatcctctcagaggctgaaggacgcactattggaccatgatcttgcgctt
cctctgtgtttgcttatggctcaacagcggaatggtgtaatctttcaggaaggtggagag
aaacatttgaaacttgtgggaaagctctatgatcagtgtcatgataccctggtacagttt
ggtgggtttttggcatctaacctaagcacagaagattacataaaacgagtaccttcaatt
gatgtgctctgtaatgaatttcacacacctcatgatgcagcatttttcctgtctaggcca
atgtatgcacatcacatttcatcaaaatatgatgaacttaaaaaatcagaaaagggaagt
aaacagcaacataaagttcataagtacatcacatcatgtgagatggtgatggctcctgtt
catgaagcagtggtctccttgcacatttccaaagtctgggatgacatcagccctcaattc
tatgctacattctggtcgttgacaatgtatgaccttgcagttccacaaaccagctatgaa
agagaagtcaataaacttaaaatccagatgaaagcaattgatgacaatcaggaaatgcct
ccaaataaaaagaaaaaagagaaggagcgctgtactgcccttcaggacaagcttcttgaa
gaagaaaagaaacagatggaacatgtacagagagttctacaaagactgaaactggaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgacataatttacacagttgcaagctgtactgaaaatgaagctagtcgatacggg
agatttctttgctgcatgttagagactgtgaccaggtggcacagtgatagagccacatat
gagaaggaatgtggaaactatccaggattccttaccatattacgggcaactggatttgat
ggtggaaataaagctgatcaattagactatgaaaattttcgacatgttgtacataaatgg
cattacaaactaaccaaggcatcagtacattgccttgaaacaggcgaatatactcacatc
aggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctg
ggtcaggctttggaaagaagagtgcataaaatctaccaagaagaaaaagagaagaggcct
gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg
atacctgaaaatgagtttcatcacaaagacccccctccgaggaatgcagttgccagtgta
caaaatgggcctggtggtgggccttcttcatcatcgataggaagtatatctaaatcggac
gaaagcagtactgaggagactgataaatcaagggagagatctcagtgtggtgtgaaagct
gttaataaagcttctaatgccacaccgaaagggaattcaagcaatggaaatagtggctct
accagcaacaaaactgttaaagaaaatgacaaagaaaaagcaaaagagaaagaaaaagag
aaaaaagaaaagactccagctactactccagaggccagggtacttggtaaagatggtaaa
gaaaaaccaaaggaagagcgggcaaataaagatgaaaaagcaagagagaccaaggaaaga
acaccaaaatctgacaaagagaaggaaaaattcaagaaggaagaaaaagctaaagatgaa
aaattcaagaccgttgtccccatcgtagagtcaaaatcaactcaagaaaaggaaagggag
aaggagccatccagagaaagagatatagcaaaggaaatgaaatctaaggaaaatgttaaa
ggaggagaaaaaacagcagttcctgggtccttgaagtcacctgttccccgatcagatatt
gcagagcctgaaagggaacaaaaacgccgcaaaattgattctcacccttctccatcacat
tcctcaacagtaaaggacagtctcatcgaactcaaggagtcttcagcaaagctctacatt
aatcatactcctccaccactgtccaagagtaaggagagagaaatggacaagaaagatttg
gacaagtcaagggaaagatccagagagagagaaaaaaaagatgaaaaggacaggaaagag
cggaaaagggatcattcaaacaatgaccgtgaagtgccaccggacttaaccaagaggcgt
aaagaggaaaatggaacaatgggagtttcaaaacacaaaagtgaaagtccatgtgagtct
ccttacccaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaa
ggcagcgattcatttaaatctgaaaagatggataaaatctcctccggtggcaaaaaggaa
tccaggcatgataaagaaaagatagaaaagaaagaaaaacgggacagttcaggaggaaag
gaagagaagaaacatcataagtcttcagacaagcacagataa
DBGET
integrated database retrieval system
