Loxodonta africana (African savanna elephant): 100658907
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Entry
100658907 CDS
T04351
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03013
Nucleocytoplasmic transport
lav05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100658907 (NUP50)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100658907 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100658907 (NUP50)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100658907 (NUP50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
EVH1_PP4R3
SHPRH_helical-2nd
Motif
Other DBs
NCBI-GeneID:
100658907
NCBI-ProteinID:
XP_003420944
UniProt:
G3TFQ4
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MAKRIAEKELTDRNWDQEDEAEEVGTFSVASEEVLKNRAIKKAKRRNAGFESDSGGAFKG
FKGLVVPSGGGGGFSGFGNVSAAKPSGLSNGNSMTSTPVSASPKAATETKTTFGSVTTNG
PTSLVEKDISDPKTNGSSQQPSGFSASATCRGNAYHKQLAALNCSVRDWIVKHVNTNPLC
DLTPIFKDYEKYLANIEQQHGNSGSSNSESETNKTLVETQSPSLFGSTKSQQESAFLFHG
SKTEASSEKTTDPSPGTASASFNFGKKIDSAVLGSLSSGPLAGFSSSPGNASSLFGKDTT
QSKAVCSLFATKTLESQAEGGSSDCKGGDQEESDEPPKVIVTEVKEEDAFYSKKCKLFYK
KDNEFKEKGVGTLHLKPTANQKTQLLVRADTNLGNILLNVLIPPNMPCTRMGKNNVLIVC
VPNPPIDEKNATSPVTMLIRVKTSEDAEELHKILVERKSA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaattgctgagaaggaattgacagataggaattgggatcaagaagatgaa
gcagaagaggtgggaacattctcggtggccagtgaggaagtcttgaagaatagagccata
aaaaaagcaaaacgtaggaatgctggatttgaatccgatagtggaggggcttttaaaggt
tttaaaggcttggttgtaccttctggaggaggaggagggttttctggatttgggaatgtc
tctgcagcgaagccttcaggactgtcaaatggaaatagcatgaccagcacccctgtgtct
gccagtcccaaggcagccacagagaccaagacgacttttggttctgttactacaaatggt
cctacctccttggttgagaaagatatttcagatcccaaaactaatggcagcagtcagcag
ccctccggcttttcagccagtgcaacgtgccgtggcaatgcctatcacaagcagttagca
gccttaaattgctccgtccgcgactggatcgtgaagcatgtgaacacaaacccactctgt
gatctgacacctatcttcaaagactacgagaaatacttagcgaacatcgaacagcaacat
gggaacagtggcagcagtaattctgaaagtgaaactaacaagacgttggttgaaacacag
tctccttcactctttggttcaacaaaatcacagcaagaatcagcgtttttgtttcatggc
agcaaaactgaggcttcgtccgagaagacgacggacccgtccccaggaacagcaagtgcc
tcatttaactttggcaaaaaaatcgacagcgcagttttgggctcgctgagctctgggccc
ctggctgggttttcatcctccccaggaaatgccagcagcttatttggcaaagatactacc
cagagcaaagcagtgtgttcactgtttgccaccaaaacgctggagagccaagcagaaggt
gggagcagtgactgcaaaggtggagaccaagaagagagtgatgagccacccaaagtaatc
gttactgaagtcaaagaagaagatgctttttactctaagaagtgcaaactattttacaag
aaagacaacgaatttaaagagaagggtgtaggtactctgcacttaaaacctacagcaaat
cagaagacacagctcctggtgcgggcagacaccaatttaggcaacatattgctgaatgtc
ttgattccacccaacatgccatgcacccggatggggaagaacaacgtgctcattgtctgt
gttcccaaccctcccatcgatgagaagaatgccaccagcccggtgaccatgttaatccgg
gtcaagactagcgaggacgccgaggagttgcacaagattttagtggagaggaagagtgcc
tga
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