Loxodonta africana (African savanna elephant): 100658956
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Entry
100658956 CDS
T04351
Symbol
DCP1A
Name
(RefSeq) mRNA-decapping enzyme 1A isoform X1
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100658956 (DCP1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100658956 (DCP1A)
03036 Chromosome and associated proteins [BR:
lav03036
]
100658956 (DCP1A)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100658956 (DCP1A)
mRNA degradation factors
5'-3' decay
Decapping complex
100658956 (DCP1A)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100658956 (DCP1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
100658956
NCBI-ProteinID:
XP_003410102
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MESLSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRS
ASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAK
LMANVVEEETRRSQQAARDKQSPNQANGCSDHRPIDILEMLSRAKDEYERNQMGDSNISS
PGLQPSTQPSNLGSTETLEDMPSGSQDKSAPSGHKHLTVEELFGTSLPKEQPMVMGLDSE
EVEKLPGDASQKEPSPFLPFSFEHSGGAPQSESLGVQSTAPASVQPEVTAPLLITPASIT
QSSEKHAPSYTIPLSPVLSPTLPAEAPTAQLPPSLPRNSTMMQAVKTTPRQRSPLLNQPV
PELSHTCLIANQSPFRAPLSVTSTAATSLSSVDLLQKLRLTPQHDQIQTQSLGKGTAAPS
FPPAAGQLATPESFIEPPPKTAAARAAASASLSNMVLSPLQSMQQNQDCEVFAPPKVLPS
AIPVAGASLVTATTTAIPSVLLSPSVFQQTATRSTDLERKANSPSPLTVGASENQRKPSI
ILSKAQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKENLNL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgctgagtagagctgggcaggagatgagcttggcggccctgaaacagcacgac
ccttacatcaccagcatcgcggacctcacgggccaggtcgctctgtacactttttgccct
aaggccaaccagtgggagaagaccgatatagaagggactttatttgtatatcgaaggtca
gcttcaccttaccatggttttaccattgtgaatcgactgaatatgcacaatctagttgaa
ccagtcaataaagatttggaatttcagctccatgaaccatttcttctatacagaaatgca
agcttgtcaatatacagtatctggttttatgacaagaatgactgtcaccgcatagccaaa
ctcatggccaatgtggtggaagaggagacacggcggtcccagcaggctgctcgggataag
cagagtcctaaccaggccaatggctgcagcgaccacaggcccatcgacatcctggaaatg
ctgagcagagccaaggatgagtatgagaggaatcagatgggcgactcaaatatctccagc
cctgggttacagccaagcactcagccgtccaatctgggaagcacagagactctagaggac
atgccctccgggtcacaagataagtctgctccatctggacacaaacatctgacagtggaa
gaactatttggaacttctttgccaaaggaacagccaatggtcatgggtcttgattcagaa
gaagtggagaagctgccaggagatgcctcccagaaagagcccagcccgttcctaccattt
tcctttgagcattcaggaggggcccctcagtcggaaagcttgggtgttcagtctactgcc
cccgcctcagtccaacctgaggtcaccgccccactactgatcactcctgcctccattaca
cagtccagtgaaaagcatgccccaagctacacgatcccgctgagccctgttctcagtccc
actctgccagcagaagctcctactgcacagctgccccccagcttacctcgaaacagcacc
atgatgcaggcagtgaagaccacacccaggcagaggtctccactcctgaatcagccagtc
cctgagctaagccacacctgtctgattgccaaccagagccccttcagggccccactgagt
gtgacaagtacagctgctacatccctctcaagtgtggatcttctccagaaactcaggttg
accccacagcatgaccaaatacagacacagtcacttgggaaaggtacagcagcacccagc
tttcctccagcagctggccagctggccacacctgagagcttcatagagcctccccctaaa
accgcagcagccagagcagcagcctcggcctccctgagcaacatggtgctctcgcccctt
cagtctatgcagcaaaaccaggactgtgaagtatttgccccgcctaaggtgttacccagt
gccatcccggttgcaggcgcctcgctggttaccgcgacgaccacggcaataccttctgtc
ctgctgtccccaagtgttttccagcagacagctacaaggtccaccgaccttgagaggaag
gcaaactccccttctcctctaactgttggggcatcagaaaatcagagaaagccctccatt
attctcagcaaggctcagctccaggatacgttaatacatctgataaagaatgattctagc
tttctcagtacacttcatgaagtctacttgcaggttctgaccaagaacaaagaaaacctc
aacctgtga
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