Loxodonta africana (African savanna elephant): 100659042
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Entry
100659042 CDS
T04351
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X2
KO
K13217
pre-mRNA-processing factor 39
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lav03041
]
100659042 (PRPF39)
Spliceosome [BR:
lav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100659042 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_16
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
100659042
NCBI-ProteinID:
XP_003408549
UniProt:
G3SSN4
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MQNSHMDEYKNSSNGSTGNSSEVAVEHSTDFSTEIMNVTEMEQSPDDSPNVNATAEENEV
ANAVDLPVVETEANFPPEYEKFWKTVENNPQDFTGWVYLLQYVEQENHLMAAKKAFDKFF
IHYPYCYGYWKKYADLEKRHDNVKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDP
ETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSH
HFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGVEDITDPAKL
ITEIENMRHRIIEVHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEF
EIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKKPM
VHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAI
KNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL
KQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQD
SLKRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYGQ
YYPPPPT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcagaattctcacatggatgagtacaaaaattctagtaatggcagcacaggcaacagt
tcagaggtagcagtggaacattctactgatttcagtactgagataatgaatgttacagaa
atggaacagtcacctgatgactctcccaatgtgaatgcaactgcagaagaaaatgaagtg
gcaaatgctgtggacctcccagtggtagaaactgaagcaaatttccctccagaatatgaa
aagttttggaaaactgtagaaaataatcctcaggattttacaggctgggtatatttgctt
cagtatgtggaacaggagaatcacttgatggctgccaagaaagcatttgacaaatttttc
atacactatccgtattgctatggttactggaaaaagtatgcagaccttgaaaagcgacat
gacaacgttaaacaatcagatgaggtttatcgtcgggggcttcaggcaatacctcttagt
gttgacctttggatacattatataaacttcttaaaagaaacattggaccctggcgatcct
gagacaaacagtacaataagaggaacttttgagcatgctgttctagctgcaggaacagat
ttccgatctgacagactgtgggaaatgtatataaactgggaaaatgaacaaggaaaccta
agagaagttacagctatatatgaccgtattcttggtattccaacacagctatatagtcat
cattttcagagatttaaagaacatgtacagaataacttgcctagagatcttttaactggt
gagcagtttattcagctgcgaagggaattagcgtctgtaaatggacacagtggtgatgat
ggtcctcctggtgacgatctaccgtcgggagttgaagatataacggatccagcaaagctt
atcactgaaattgaaaacatgagacacagaatcattgaagtccatcaagaaatgtttaat
tataatgagcatgaagttagcaaaaggtggacatttgaagaaggtattaaaagaccttat
tttcatgtgaaaccattggaaaaggcgcagctaaaaaactggaaagaatatttagaattt
gaaattgaaaatgggactcatgaacgagttgtggttctttttgaaagatgtgtcatatca
tgtgccctctatgaggagttctggattaagtatgcaaagtacatggaaaaccacagtatt
gaaggagtgaggcatgtcttcagcagagcttgtactattcatctcccaaagaagcccatg
gtgcatatgctttgggcagcttttgaggagcagcagggtaatattaatgaagccaggaat
atcttgagaacatttgaagaatgtgttctgggattggcgatggttcgtttaagaagagta
agtttagagcgacggcatggaaatatggaagaagctgaacatttgctgcaagatgccatt
aagaatgccaaatcaaataacgaatcatcgttttatgctatcaaactggcccgacatctt
ttcaaaatacaaaaaaaccttccaaaatcaagaaaggtgcttttggaagcaattgaaaga
gacaaagagaacacaaagttatacctcaatttacttgaaatggaatatagtggtgacctc
aaacaaaatgaagaaaacatcctaaattgttttgacaaagctatacatggttcattgcct
attaaaatgagaattacattttctcagagaaaagtggaatttcttgaagattttggttca
gatgttaataagcttctgaatgcttatgacgaacatcaaacactcctgaaagaacaggat
tctttaaaaaggaaggcagaaaatggatcagaagaaccagaggaaaagaaagcacacaca
gaagatacaacatcatcatcaacacagatgattgatggtgatttacaggcaaatcaagct
gcatataactacagtgcatggtatcagtacaattatcagaatccttggaattatggacag
tattatcctcctcctccaacctga
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