Loxodonta africana (African savanna elephant): 100659212
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Entry
100659212 CDS
T04351
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav01522
Endocrine resistance
lav04330
Notch signaling pathway
lav04658
Th1 and Th2 cell differentiation
lav04919
Thyroid hormone signaling pathway
lav05020
Prion disease
lav05165
Human papillomavirus infection
lav05200
Pathways in cancer
lav05206
MicroRNAs in cancer
lav05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100659212 (NOTCH1)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
100659212 (NOTCH1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100659212 (NOTCH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100659212 (NOTCH1)
05206 MicroRNAs in cancer
100659212 (NOTCH1)
09162 Cancer: specific types
05224 Breast cancer
100659212 (NOTCH1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100659212 (NOTCH1)
09164 Neurodegenerative disease
05020 Prion disease
100659212 (NOTCH1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
100659212 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
EGF_3
DL-JAG_EGF-like
cEGF
JAG1-like_EGF2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
100659212
NCBI-ProteinID:
XP_003422786
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MPPLLAPLLCLVLLPAFPAARGLRCSQTGEETCLNGGKCEVFANGTEACLCSGAFVGQRC
QTSNPCLSAPCKNAGTCRVLEHGSTVDYACSCRLGFSGPLCLTPLDNACLTNPCRNGGTC
DLLTLNEYKCRCPPGWSGKTCQQADPCASNPCANGGQCLPFEASYICRCPPGFHGPTCRQ
DVNECSQTPRPCRNGGTCHNEVGSYHCTCRPTHTGPHCELPYQPCSPSPCQNGGTCRPTG
DTTHECACLPGFTGQNCEENVDDCPGNSCKNGGTCVDGVNTYNCRCPPEWTGQYCTEDVD
ECQLMPNACQNGGTCHNTHGGYNCVCVNGWTGEDCSENIDDCANAACFHGATCHDRVASF
YCECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECS
LGANPCEHAGRCINTQGSFECQCLQGYTGPRCEIDVNECVSSPCQNDATCLDQIGEFQCI
CMPGYEGVYCELNTDECASSPCLHNGRCLDKINEFHCECPTGFTGHLCQYDVDECASTPC
KNGAKCLDGPNTYTCVCTEGAARRPVRAGAGDAGQDVLPQGSEGGRRPGTLNPAQRADPN
INECHSQPCRHGGTCQDRDNAYLCLCLKGTSGPNCEVNLDDCASNPCDSGTCLDKIDGYE
CACEPGYTGSMCNINIDECAGNPCHNGGTCEDGINSFTCRCPEGYHDPTCLSEVNECGSN
PCIHGACRDGLNGYKCDCDAGWSGANCDINNNECESNPCVNGGTCKDMTSGYVCTCREGF
SGPNCQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEVVLAPCAPSPCRNGGE
CRESEDYESFSCVCPTGWQGQTCEIDINECVKSPCRHSASCQNTNGGYRCHCLAGYTGRN
CETDIDDCRPNPCHNGGSCTDGINAAFCDCLPGFQGTFCEEDINECASNPCRNGANCTDC
VDSYTCTCPAGFSGIHCEDNTPDCTESSCFNGGTCVDGISSFTCLCPPGFTGSYCQHDIN
ECDSRPCLHGGTCQDSYGTYKCTCPQGYTGLNCQSLVHWCDSSPCKNGGKCWQANTLYHC
DCHSGWTGLYCDVPSVSCEVAARQQEVDVTHLCQHGGLCMDTGNTHHCRCQPGYTGSYCE
DQVDECSPSPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSRPCQNGGTCIDLTN
TYKCSCPRGTQGVHCEINVDDCIPAVEPGTRSPKCFNNGTCVDQVGGYSCICPPGFVGER
CEGDVNECLSNPC
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgctcctggcgccgctgctctgcctggtgctgctgccggcgttccccgctgca
cgaggcctgcgatgttcccagactggtgaggagacctgcttgaatggcgggaagtgtgaa
gtgtttgccaatggcacggaggcctgtctctgcagcggggccttcgtgggtcagcggtgc
cagacatccaacccctgcctcagcgcaccctgcaagaacgccgggacgtgccgtgtgctg
gagcacggcagtacagtggactacgcctgcagctgccggctgggcttctccggcccgctc
tgtctgacgcctctcgacaacgcctgcctcaccaacccctgccgcaacggcggcacctgt
gacctgctcacgctcaatgagtataagtgccgctgccccccgggctggtcagggaagaca
tgccaacaggccgacccctgcgcctccaacccctgtgccaatggcggccagtgtctgccc
ttcgaggcctcatacatctgccgctgcccgcctggcttccatggccccacctgccggcag
gacgtgaatgagtgtagccagacccccaggccttgccgcaacgggggcacctgccacaat
gaagtcggctcctaccactgcacctgccgccccacccacaccggcccccactgcgagctg
ccctaccagccttgtagcccctctccctgccagaacggaggcacctgccgccccactgga
gacaccacccacgagtgcgcctgcctgccaggtttcaccgggcagaattgtgaggagaac
gtggacgactgcccagggaacagctgcaagaacgggggtacctgtgtggatggtgtcaac
acctacaactgccgctgcccacctgagtggacaggccagtactgtacggaggatgtggat
gagtgccagctgatgcccaacgcctgccagaacggcggcacctgccacaacacccatggc
ggctacaactgcgtgtgtgtcaatggctggaccggcgaggactgcagtgagaacatcgac
gactgtgccaatgccgcctgcttccacggcgccacctgccatgaccgtgtggcctccttc
tactgcgagtgcccccatggccgcacaggtcttctctgccacctgaacgatgcctgcatc
agcaacccctgcaacgagggttccaactgtgacaccaaccctgtcaatggcaaagccatc
tgcacctgcccctcagggtacacggggcccgcctgcagccaggatgtggacgagtgctct
ctgggcgccaacccctgtgagcacgcaggcaggtgcatcaacacccagggctccttcgag
tgccagtgtctgcagggctacacaggcccacgctgcgagatcgatgtcaatgagtgtgtc
tccagcccctgtcagaatgatgccacctgcctggaccaaatcggggagttccagtgtatc
tgcatgcctggctacgagggcgtctactgtgagctcaacacggacgagtgcgccagcagc
ccttgcctgcacaatggccgctgcctagacaagatcaatgagttccactgcgagtgcccc
actggcttcacggggcacttgtgccagtatgacgtggatgagtgtgccagcacgccctgc
aagaacggcgccaagtgcctggacgggcccaacacgtacacctgcgtgtgcacggaaggt
gcggccaggcgccccgtcagggccggagcaggggatgcgggacaggatgtcctgcctcag
gggagtgaggggggcaggagacctgggacactgaatccagcacagcgtgctgaccccaac
atcaacgagtgccatagccagccctgccgccatgggggcacctgccaggaccgcgacaat
gcctacttgtgcctctgcctcaaggggacctcagggcccaactgtgaggtcaatctagac
gactgtgccagcaacccctgcgactcgggcacctgcctggacaagatcgacggctacgag
tgtgcgtgcgagcctggctacacagggagtatgtgcaacatcaacatcgacgagtgtgcg
gggaacccctgtcacaatgggggcacctgtgaggacggcatcaatagcttcacttgccgc
tgccccgagggctaccacgaccccacctgcctgtcagaggtcaacgagtgtggcagcaac
ccctgcatccacggtgcctgccgggatgggctcaacgggtacaagtgtgactgtgacgct
ggctggagtggggccaactgtgacatcaacaacaatgagtgcgagtccaacccctgcgtc
aatggtggcacctgcaaggacatgaccagcggctatgtgtgcacatgccgggagggcttc
agcggccccaactgccagaccaacatcaacgagtgcgcatccaacccgtgtctgaaccag
ggcacatgcatcgatgacgtggccggctacacgtgcaactgcctgctgccctacacggga
gccacgtgtgaggtggtgctggccccgtgtgcccccagcccctgcaggaatggtggcgag
tgcagagagtctgaggactacgagagcttctcctgcgtctgtcccacaggctggcaaggg
cagacgtgtgagatcgacatcaatgagtgtgtgaagagcccgtgccggcacagcgcctcc
tgccagaacaccaatggtggctaccgctgccactgcctggcaggctataccggacgcaac
tgtgagacagacattgacgactgccggccgaacccgtgccacaatggtggctcctgcacg
gatggcatcaatgcagccttctgcgactgcctgccgggcttccagggcaccttctgtgag
gaggacatcaacgagtgcgccagcaacccctgccgcaacggcgccaactgcacggactgc
gttgacagctatacgtgcacttgccctgccggcttcagcgggatccactgcgaggataac
acgcctgactgcaccgagagctcctgcttcaacggcggcacgtgtgtggatggcatcagc
tccttcacctgcctatgtccacctggcttcacgggcagctactgccagcatgacatcaac
gagtgtgactcacgaccctgtctgcacggcggaacctgccaggacagctatggcacctat
aagtgcacctgccctcagggctacactggcctcaactgccagagcctggtacactggtgc
gactcctcgccttgcaagaatggcggcaagtgctggcaggccaacacactgtaccactgc
gactgccacagtggctggactggcctctactgcgacgtacccagcgtgtcctgtgaggtg
gctgcgcggcagcaagaggtcgacgtcacccacctgtgccagcacggggggctgtgcatg
gacacgggcaacacccaccactgccgctgccagcccggctacaccggcagctactgtgag
gatcaggtggacgagtgctcgcccagcccctgccagaacggagccacctgcaccgactac
ctgggtggctactcctgcgagtgtgtagctggctaccacggggtgaactgctccgaggag
atcaacgagtgcctgtcccgcccgtgccagaatgggggcacctgcatcgacctcaccaac
acctacaagtgctcctgccctcggggcacacagggcgtgcactgtgagatcaacgtggat
gactgcatcccggctgtggagccaggtacgcggagccctaagtgcttcaacaacggcacc
tgcgtggaccaggtgggcggctacagctgcatctgcccacctggctttgtgggcgaacgc
tgcgagggtgacgtcaacgagtgcctgtccaacccctgt
DBGET
integrated database retrieval system
