Loxodonta africana (African savanna elephant): 100659253
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Entry
100659253 CDS
T04351
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03030
DNA replication
lav03410
Base excision repair
lav03420
Nucleotide excision repair
lav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100659253 (RFC1)
03410 Base excision repair
100659253 (RFC1)
03420 Nucleotide excision repair
100659253 (RFC1)
03430 Mismatch repair
100659253 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lav03032
]
100659253 (RFC1)
03400 DNA repair and recombination proteins [BR:
lav03400
]
100659253 (RFC1)
DNA replication proteins [BR:
lav03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100659253 (RFC1)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100659253 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
RuvB_N
Rad17
AAA_14
AAA_22
BRCT_2
AAA_5
AAA_33
AAA_7
AAA_18
AAA_16
nSTAND3
AAA_17
Zeta_toxin
AAA_30
RNA_helicase
NTPase_1
TIP49
Abhydrolase_8
NPHP3_N
AAA_19
AAA_28
SKI
Motif
Other DBs
NCBI-GeneID:
100659253
NCBI-ProteinID:
XP_003411350
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVNEIVKKNEKTKPTEETLKAKKGVKEIKVNSSCKDDDFKQKPPN
KKKRIIYDSDSESEERVQVKNAKKQPEKMTMSSKPGKILRKDPVSYISETDEEDDPVCKK
AAFKSKENGGSADSYLGTSDMKKNEKNTKTKNKPLSPVKLTPTSVLDYFGTGSIQRSDKK
MVASKRKEPSQNTKDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDDEPKTKK
TRKNQEEKETSSSVQASLSKTEKHKYPHKVKTEQFSDERKNSSPKKQPKCESSKESEPHP
KSSAHKTGEPSPGKASSKLALLKKRERGSYREVEPMGSKRQENAGELKGETKTPKKTRSS
PTKKESTSPEDSEKKRANYQAYRSYLSREGPKALGSKEIPKGAENCLEGLIFVITGVLES
IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQCKSDKAAALGTKIIDEDGLLNLIR
TMPGKKSKYEIAVEAEMKKEKSRLERTPSKNDQGKRKLSPNKKDSESKKNKLTPKRDSSL
NSIKKETSAFQKSLDFEEQVAEETNVNSGARNLADDSSGHKVESLLWVDKYKPTSLKAII
GQQGDQSCANKLLRWLRNWHKSPSEDKKHAAKFGKSAGKDDGSSFKAALLSGPPGVGKTT
TASLVCQELGYSYVELNASDTRSKNSLKEIVSESLNNTSIKGFYSSGAVHSPSAKHALIM
DEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRSHPKVRSLVHYCFDLRFQRPRVEQ
IKGAMMSVAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCAQSKALTYDQAKVDSNR
AKKDIKLGPFDVARKVFAAGEETAHMSLMDKLDLFFHDYSIAPLFVQENYVHVKPIAAEG
DVKKHLMLLSRAADSICDGDLVDRQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPTF
PSWLGKYSSMGRHDRVVQDLALHMSLRTYSSKRTINMDYLSHIRDALVQPLASQGVEGVQ
AVVALTDTYYLMKEDFDNIMELSSWGGKPSAFSKLDPKVKAAFTRAYNKEAHLTPYSLQA
IKTSRRSIGPVLESEYNEELNEDDSQFDEKDQDAVETDAMIKKKAKPSKPSKSEKDKESK
KGKGKSSKK
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggacattcggaaattctttggggttataccaagtggaaagaaacttgtaaatgaaata
gtaaagaagaatgagaaaacaaagcccactgaagaaactttaaaagcaaagaaaggagta
aaggaaatcaaggtaaatagttcttgcaaagatgatgacttcaaacagaaaccaccaaac
aagaaaaagaggatcatctacgattcagattcagaatcagaggagagagtgcaggttaaa
aatgccaaaaagcaaccagaaaaaatgacaatgtcttctaaacctggtaaaattctacga
aaggatcctgtttcatacatttcagaaacagatgaagaagatgaccctgtgtgtaagaag
gcagcctttaaatcaaaagagaatggaggatctgcagatagttatcttggaacatcagac
atgaaaaagaatgaaaaaaacactaagaccaagaataagcctttatctccggtaaaactt
acacccacatcagtgcttgactattttggaactggaagtatccaaagatcagataaaaag
atggtggcaagtaaaagaaaagagccttcacaaaatacaaaggattccagattaaatgat
gaagctatcgccaagcaactgcaacttgatgaagatgcagagttggagaggcaactgcat
gaggatgaagagtttgccagaacgttggccatgttggatgacgaacccaagaccaaaaag
actcgaaagaaccaagaagagaaagaaacgtcttcatctgtccaagccagtttaagtaaa
acagaaaaacataaatatcctcataaagtaaaaacagaacaattttcagatgaaagaaag
aacagcagtcctaagaaacaacccaaatgtgaaagttcgaaagaatctgagccacatcct
aagtcgtcagctcacaaaacaggagaaccctctcctggaaaggccagttctaagctggca
cttctgaaaaaaagagaaaggggttcctatcgagaagtagagcccatgggctcaaaaaga
caagaaaatgctggtgaattgaaaggagaaacaaaaacacctaagaaaaccagaagttct
ccaactaaaaaagagtctacaagtcctgaagattcggaaaagaaacgcgctaattaccaa
gcttatcgaagctacctaagtcgagaaggtcccaaagctctgggctccaaagaaatacca
aagggagctgaaaattgcttggaaggccttatatttgtaatcacgggagtgctggagtcc
attgaacgagatgaggccaagtctctaattgagcgttatgggggaaaagtaaccggaaat
gtcagcaagaaaacaaactaccttgtcatgggtcgggatagtggacagtgcaagagtgat
aaggcagcagccttgggaacaaaaattattgatgaagatggattattgaatctgattcga
actatgccaggcaagaaatccaagtatgaaatagcagttgaagctgagatgaagaaagaa
aagtccagattggagagaacaccctccaaaaatgaccaaggaaaaagaaaacttagtcca
aataagaaggactcagaatctaaaaagaacaaactgactcccaaaagggacagctcttta
aactcaataaaaaaggaaacaagtgcgtttcagaaaagcctggactttgaggagcaggtg
gctgaggagacaaatgttaacagcggggctaggaatttggctgatgacagcagtggacac
aaagtggaaagtttgctctgggtggataaatataagccaacctcgctcaaggccataatt
ggacagcagggtgaccagagctgtgccaacaaactcctacgctggcttcgaaactggcac
aagagtccatccgaagataaaaaacacgcagcaaagtttggtaaatctgccggcaaggat
gatggctctagttttaaggcagcactgctctcaggccctccgggagttggcaaaacaacc
acagcttccctggtttgtcaggaattggggtatagctatgtggaactgaatgcaagtgac
acccggagtaagaacagtttgaaggagattgtttctgaatcactgaataataccagcatc
aaaggcttttattcaagtggcgccgtccattcaccaagtgccaaacacgctctcatcatg
gatgaagtggacggcatggcaggcaacgaggacaggggaggaattcaggagttaattggc
ctgataaaacatacaaaaattcccattatttgtatgtgcaatgatagaagtcatcccaag
gttcgctctctggttcattattgttttgatcttcgttttcaaagacctcgggttgaacag
attaagggtgctatgatgtctgttgcatttaaagagggtttaaagattccccctccagct
atgaatgaaataattttgggagctaatcaagatatcagacaggttttgcacaatctgagt
atgtggtgtgcgcagagtaaggcactaacctatgaccaggccaaggtcgattctaataga
gccaaaaaggacatcaagctgggcccgtttgatgttgcccggaaagtatttgcagctgga
gaggaaactgcccatatgtcacttatggacaaattggatctcttttttcatgattattca
atagcccccctctttgtccaggagaactacgtacatgtgaagcctatagccgcagagggt
gacgtgaagaagcacttgatgctgttgagcagagcagcagatagcatatgcgacggtgac
ctagtggatcgtcagatccggagtaagcaaaactggagcctcctgcccacacaggccatt
tatgccagtgttcttcctggagagttaatgagggggtacatgactcagtttcccaccttt
ccaagctggctggggaagtactcttctatgggcagacatgatcgtgttgttcaggacctt
gcattgcatatgagtctcagaacgtactccagcaaaaggaccataaacatggattatctg
tcacacataagggatgcacttgtacaacccttggcctcacaaggggtagaaggagtgcag
gccgttgtagcacttacggacacatattatttgatgaaagaagactttgataatatcatg
gaacttagcagctggggaggcaaacctagtgctttttccaagctggatcccaaggtcaaa
gcagccttcacgagagcttacaataaggaagcccatcttactccatattcacttcaggca
ataaagacgtctagacgcagcataggtccagtgctggagtctgaatacaatgaagagtta
aatgaagatgactctcagtttgatgagaaagaccaagatgcagtggaaacggatgctatg
atcaagaaaaaggcaaaaccttccaagccttcaaagtcagaaaaagataaggagtccaaa
aaaggaaaaggaaaaagttcgaagaaatga
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integrated database retrieval system
