Loxodonta africana (African savanna elephant): 100659434
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Entry
100659434 CDS
T04351
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100659434 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lav01009
]
100659434 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lav04515
]
100659434 (PCDH9)
Protein phosphatases and associated proteins [BR:
lav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100659434 (PCDH9)
Cell adhesion molecules [BR:
lav04515
]
Cadherins
Protocadherins
100659434 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
RCR
V_ATPase_I
EphA2_TM
MAP17
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
100659434
NCBI-ProteinID:
XP_003412638
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADVGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVAE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGDNKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPASTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHSKSD
NIPVTPQKCLSSAGLHVQENEENHYESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLI
SHPLPLVQPQDEFYDQVSPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDSSRNQFNDRKQYGS
NEGHFNNGSHMTDIPLANLKSYKQSGGAVESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgatcgcctgtttaaggctcgattcc
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgccgccacagggaccagcgcc
agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtatccagt
agcactggggaaatcttcacaacctccaacagaatagacagagaaaaactctgtgctggg
gcctcttatgctgaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat
gattttttcaggctgatcaaaataaaaataattgtcaaggataccaatgacaatgccccc
atgtttccatctccggtcatcaatatttccattccagaaaacactttgatcaacagccgc
tttccaattccatcggcaacagatcctgacacaggcttcaatggtgtgcagcattatgaa
ttgttaaatggtcagagtgtttttggactggacatcgtggaaactccggagggagagaag
tggccgcaattgattgttcagcaaaacttggatagagaacagaaggacacctatgtgatg
aaaatcaaagtagaggatggaggcactccacagaaatccagcacggccatactgcaggtc
acagtaagtgatgtaaatgacaacaggccagtgtttaaagagggtcaagtggaggtgcat
atcccagagaacgctcccgtaggcacctctgtgattcagctccacgccactgatgcagat
gtaggcagtaatgcagaaatccggtacatttttggtgcccaggtcgcccctgcaaccaaa
agactctttgctttaaataatactactggactgatcacagttcagaggtccttagatcgc
gaggagacagccattcacaaagtgacagtgctggctagtgatggcagctccactcctgct
cgagcaacggttaccatcaatgtcactgatgtaaatgataaccctcccaacatagacctc
aggtacattataagtcccatcaacggcacagtgtacttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgtttcattgaaagagaggtcccgtttcatttgaaggcagtttatgacaaccagtatttg
ttagaaacctcttctttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctgggaaacctagtttaaatcagactgccctggtaagggttaagcttgag
gatgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagttgctgaa
aacaaccgacgtgggttatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggaccgaatgcctccttctttgatctggacagaaag
acaggagttttgacagcctccagagtctttgacagagaagaacaagaacgcttcattttt
acagtaactgccagggacaatgggacccctcccctccaaagccaagcggctgtgatagtt
actgttctggatgagaatgacaatagccccaagtttactcataatcattttcaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacggtgacagatgcagat
gctggggataataaagccgtgactctttccattctaaatgacaatgagaattttgtgttg
gatccatactccggagtcataaagtcaaacgtttcatttgacagagagcagcagagctcc
tacactttcgatgtcaaagccacagatggaggacaaccaccccgttcctccactgcgaaa
gtaactatcaatgtcatggatgtcaatgacaatagccccgttgttatttctccaccgtct
aacacttccttcaagttggtgcccctctcagccattcctggctccgtggtagcagaagtt
tttgcagtggatattgacacaggaatgaacgctgaacttaagtatacgattgtgagtgga
aacaacaaaggtttgtttcggatcgatccggtaacaggtaacattactctggaagaaaaa
ccggcatctactgatgtgggcttgcaccgtttggtggtcaacataagtgacctggggtat
ccgaagtctttgcacacgctcgtgctggtttttctatatgtgaatgacactgctggcaat
gcctcctacatctatgacttgatccgcaggactatggagacccccttggacaggaacata
ggggatagtagccaaccctatcaaaacgaggactatctcaccatcatgatcgccatcgtg
gcaggcgccatggtggtcattgttgtgatcttcgtcaccgttctggtgcgctgtcgccat
gcatcaaggttcaaagcagctcagaggagcaagcaaggcgctgaatggatgtccccaaac
caggagaacaaacaaaacaagaaaaagaaaaggaagaaaagaaagtctcccaagagctct
cttttgaactttgttactatcgaagagtccaagccggatgatgcagttcacgaacctatc
aatgggacaataagcctgccagctgagctggaggagcaaagcataggaagatttgactgg
ggccctgcccctccaacaaccttcaagcctaacagccccgacctggccaagcactacaaa
tctgcctctccacagcctgcttttcaccttaaacctgacactccagtttctgtgaaaaag
catcatgtgattcaggaactccctttggacaacacctttgtcgggggttgtgacacgctt
tccaaacgttcttccactagttcagaccacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacagcaaaagtgac
aatattcctgtcactcctcagaaatgtctcagctctgcgggtctccacgttcaggagaat
gaagaaaaccattacgagtcgcagcggcgcgttacgtttcaccttcctgatggctcccag
gaaagctgcagtgacagtggtctaggagaccacgagccggtgggtagtggaaccctgatc
tcacaccctcttcctctggttcagccacaggacgaattctacgaccaggtctctccggac
aagaggaccgaagcagatggcaactccgaccccaactctgatgggcctctgggtccccga
ggattagcagaagcaacggagatgtgcactcaagagtgcttggttttgggtcactccgat
aattgttggatgcctcctggcttgggcccatatcaacaccctaaatctcctctctcaacc
tttgcaccccagaaagaatgggtcaagaaggacaagctagtgaatgggcacaccctgact
agagcctggaaagaagacagcagcaggaaccagttcaatgaccgtaagcagtatggctcc
aacgaaggccatttcaacaatggcagccacatgacagacattcctctggcaaatctgaag
tcctataagcaatcaggaggtgcagttgagagtcctaaagagcaccaactctaa
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integrated database retrieval system
