Loxodonta africana (African savanna elephant): 100659599
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Entry
100659599 CDS
T04351
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03082
ATP-dependent chromatin remodeling
lav04714
Thermogenesis
lav05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100659599 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100659599 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100659599 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lav03021
]
100659599 (SMARCD1)
03036 Chromosome and associated proteins [BR:
lav03036
]
100659599 (SMARCD1)
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100659599 (SMARCD1)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100659599 (SMARCD1)
PBAF complex
100659599 (SMARCD1)
GBAF(ncBAF) complex
100659599 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
DivIC
Motif
Other DBs
NCBI-GeneID:
100659599
NCBI-ProteinID:
XP_003405818
UniProt:
G3SM37
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAATLGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcgggtttccagtcggtggccccgagcggcggcgccggagcctcagga
ggggcgggcgcggcggccaccctgggcccgggtgggactccggggcccccagtgcgaatg
ggcccggcgccgggtcaagggctgtaccgctccccgatgcccggagcggcctatccgaga
ccaggtatgctgccaggcagccgaatgacacctcagggaccttccatgggacctcctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggatcagtcccgc
aagagacctgcgcctcagcagatccagcaggtccagcaacaggcagtccaaaatcgaaac
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatctcaggcctatatggatctcttggcttttgaaaggaagctggatcagact
atcatgaggaaacggctagatatccaggaggccttgaaacgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggatggg
gaagggacggtggcttcctgggagcttcgggtagaaggacggctcctggaggattcagcc
ttgtccaaatatgatgccaccaaacaaaagagaaagttctcttccttttttaaatccctc
gtgattgaactggacaaagacctgtatgggccagacaaccatctggtagaatggcacagg
accgccactacgcaggagactgatggcttccaggtgaagcggccaggcgatgtgaatgta
cggtgtactgtcctgctgatgctggattaccagcctccccagtttaaattagaccctcgc
ctggctcggctcctgggcatccacacccagacccgtccagtgataatccaagcactgtgg
caatacattaaaacacataagctccaggaccctcacgagcgggagtttgtcatctgtgac
aagtacctccagcagatctttgagtctcaacgtatgaaattttcagagatcccccaacgg
ctccatgccttgcttatgccaccagaacccatcatcattaatcatgtcatcagtgttgac
cctaatgatcagaaaaagactgcttgttatgacattgacgtggaagtggatgataccttg
aagacgcagatgaattcattcctgctgtccaccgccagccagcaggagattgctactcta
gacaacaagattcatgagacgatagaaactatcaatcagctgaagacccagcgggagttc
atgctgagctttgccagagaccctcagggtttcatcaatgattggctccagtcccagtgc
agggacctcaagaccatgactgatgtggtgggtaaccccgaggaagagcgccgagctgag
ttctacttccagccttgggcccaggaggctgtgtgccgatacttctactccaaggtgcaa
cagagacgacaagaactagagcaagccctgggaatccgaaatacatag
DBGET
integrated database retrieval system
