KEGG   Loxodonta africana (African savanna elephant): 100659617
Entry
100659617         CDS       T04351                                 
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04066  HIF-1 signaling pathway
lav04137  Mitophagy - animal
lav04140  Autophagy - animal
lav04148  Efferocytosis
lav04659  Th17 cell differentiation
lav04919  Thyroid hormone signaling pathway
lav05167  Kaposi sarcoma-associated herpesvirus infection
lav05200  Pathways in cancer
lav05205  Proteoglycans in cancer
lav05208  Chemical carcinogenesis - reactive oxygen species
lav05211  Renal cell carcinoma
lav05230  Central carbon metabolism in cancer
lav05231  Choline metabolism in cancer
lav05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:lav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    100659617 (HIF1A)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100659617 (HIF1A)
   04137 Mitophagy - animal
    100659617 (HIF1A)
   04148 Efferocytosis
    100659617 (HIF1A)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    100659617 (HIF1A)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    100659617 (HIF1A)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100659617 (HIF1A)
   05205 Proteoglycans in cancer
    100659617 (HIF1A)
   05208 Chemical carcinogenesis - reactive oxygen species
    100659617 (HIF1A)
   05230 Central carbon metabolism in cancer
    100659617 (HIF1A)
   05231 Choline metabolism in cancer
    100659617 (HIF1A)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    100659617 (HIF1A)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    100659617 (HIF1A)
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    100659617 (HIF1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lav03000]
    100659617 (HIF1A)
Transcription factors [BR:lav03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    100659617 (HIF1A)
SSDB
Motif
Pfam: bHLH_HIF1A PAS_3 PAS_11 HIF-1a_CTAD PAS HIF-1 PAS_9 PAS_4 HLH DDRGK
Other DBs
NCBI-GeneID: 100659617
NCBI-ProteinID: XP_010586982
LinkDB
Position
Unknown
AA seq 822 aa
MEGAGGANDKKKISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVM
RLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKYM
GLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGR
TMNIKSATWKVLHCTGHIHVYDTNSNQSQCGYKKPPMTCLVLICEPIPHPSNIEVRIDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYDYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTECV
LKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDTES
DDQQLEEVPLYNDVMLPSSSEKLQNMNLAMSPLPASETPKPLRSSADPALNQEVALKLEP
NPESLELSFTMPQIQDQPASPSDGSTRQSSPEPNSPSDYCFDVDSDMVNEFKLELVEKLF
AEDTEAKNPFATQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSASPQSTSTITVFQ
QTQMQEPAIIANTSTATTDELKTVTKDGMEDIKILIASPSPTHVPKETTSARTSPYNDTQ
SRTASPSRAGKGVIEQTEKSHPRSPNLLSVTLSQRTTVPEEELHPKIIALQNAQRKRKME
HDGSLSQAVGIGTLLQQPEDRATTSLSWKRVKGCKSSEQNGLEQKTIILIPSDLACRLLG
QSMDESGLPQLTSYDCEVNAPVQGSRNLLQGEELLRALDQVN
NT seq 2469 nt   +upstreamnt  +downstreamnt
atggagggcgccggcggcgcgaacgacaagaaaaagattagttctgaacgccgaaaagaa
aagtctcgagatgcagccaggtctcggcgaagtaaagagtctgaagttttttatgagctt
gctcatcagttgcctcttccccataatgtcagctcgcatcttgataaagcttctgttatg
aggcttaccattagctacttgcgtgtgaggaaacttctagatgctggtgatttggatatt
gaagatgaaatgaaggcacagatgaattgcttttatctgaaagctctagatggttttgtt
atggttctcacagatgatggtgacatgatttacatttctgataacgtgaacaaatacatg
ggattaactcagtttgaattaactggacacagtgtgtttgattttactcatccgtgtgac
catgaggaaatgagagaaatgcttacccacagaaatggccctgtgaaaaagggtaaagag
caaaacacacaacgaagcttttttctcagaatgaagtgtaccctaactagccgggggaga
actatgaacataaagtctgcaacatggaaggtacttcattgcacaggccatattcatgta
tacgacaccaacagtaaccaatctcagtgtgggtataagaaaccacctatgacatgtttg
gtgctgatatgtgaacccattcctcacccatcaaatattgaagttcgaatcgatagcaag
acttttctcagtcgtcacagcctggacatgaaattttcttattgtgatgaaagaattact
gaattgatgggatatgagccagaagaacttttgggtcgctcaatttatgactattatcac
gctttggactctgatcatctgaccaaaactcatcacgatatgtttactaaaggacaggtc
accacaggacagtacaggatgcttgccaaaagaggtggatatgtctgggttgaaactcaa
gcaactgtcatatacaacactaagaactctcaaccacaatgcattgtatgtgtaaattat
gttgtgagtggtataattcagcacgacttgattttctcccttcaacaaacagaatgtgtc
ctcaaacctgttgagtcttcagatatgaaaatgactcagctattcaccaaagttgaatca
gaagatacaagtagtctctttgataaacttaagaaggaacctgatgctttaactttgctg
gccccagcggctggagacacaatcatatctttagattttggcagcaatgacacagaaagt
gatgatcaacaacttgaggaagttcccttgtataatgatgtaatgcttccctcatccagt
gaaaaattacagaatatgaatttggcaatgtctccattacctgcctctgaaactccaaag
ccacttcgaagtagtgctgaccctgcactaaatcaagaagttgcattaaaattagaacca
aatccagagtcactggaactttcttttactatgccccagattcaagatcagccagccagc
ccttctgatggaagcactagacaaagttcaccagagcctaacagtcccagtgactattgt
tttgatgtggacagtgatatggttaatgaattcaagttggaattggtagagaaacttttt
gctgaagacacagaagcaaagaatccatttgccacacaggacactgatttagacttggag
atgttagccccctacatcccaatggatgatgacttccagttacgttcatttgatcagtta
tcaccattagaaagcagttctgcaagccctcaaagtacgagcacaattacagtattccag
cagactcaaatgcaggaacctgctattatcgccaacacttccactgccaccactgatgaa
ttaaaaacagtgacaaaagacggtatggaagacattaaaatattgattgcatctccatct
cctacccacgtacctaaagaaactactagtgccagaacatcaccatataatgatacacaa
agtcggacagcctcaccaagcagagcaggaaaaggagtcatagaacagacagaaaaatct
catccaagaagccctaacctgttatctgtcactttgagtcaaaggactactgttcctgag
gaagaattacacccaaagataatagctttgcagaacgctcagagaaagcgaaagatggaa
cacgatggctcactttctcaagcagtaggaattggaacattattacaacagccagaggat
cgtgccactacatcactttcttggaaacgtgtaaaaggatgcaaatctagtgaacagaat
ggactggagcaaaagacaattattttaataccctctgatttagcatgtagactgctgggg
caatcaatggatgagagtggattaccacagctgaccagttacgattgtgaagttaatgct
cctgtacaaggcagcagaaacctactgcagggtgaagaattactcagagctttggatcaa
gttaactga

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