Loxodonta africana (African savanna elephant): 100659618
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Entry
100659618 CDS
T04351
Symbol
NRDE2
Name
(RefSeq) protein NRDE2 homolog isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100659618 (NRDE2)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100659618 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_C
TPR_12
TAF4
Motif
Other DBs
NCBI-GeneID:
100659618
NCBI-ProteinID:
XP_003408625
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MALFPAFAGVSEAADSGSSRKELDWLSNPSFCVGTIIPPSQQLEEAPNLVPEGPPLTRSP
LKSEPSDESDTNKKLKQTSRKKKKEKKKKRRHQHHKKTKRKHGQSSGSTSEPDTDAERDK
SSRSNSKRESEKPNQENHAAADIGHRCVWLEDIQAATGETFRTDKKPDPANWEYKSLYRG
DIARYKRKGDSCLGINPKKQCISWEGAPMEKKNSHKHVERYFTKKNVGLMSIDGAAVSSK
TEPPSSEAASFIPVKDSEDVAPSVTTWMNPLGIYDHSTTQWLQGQGPLEQETKLPDSQPD
RENAVLKAKVEEFNRKIRENPQDIELWMAFVAFQDEVMRRPGLYALDEGEQEKRKRSLKL
TLEKKLAILERAIESNPSSVDLKLAKLKLCTEFWEPATLVKEWQKLIFLHPNNTALWQKY
LLFCQSQFSTFSVSKIHNLYGKCLSTLSSVKDGSILSHPVLPGTEEAMFALFLQQCHFLR
QAGHSEKAVSLFQAMIDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPRAGEKGARGWRAW
MHQQERGGWVVINPDEDDDEPEEDDQEIRDKTLPRWQIWLGAERSRDQRHWQPWRPDKTK
KQTEEDCEDPERQVLFDDIGQSLIRLSSRDLQFQLVEAFLQFLGVPSGFAPPVSCLYLAM
DENSVFVHRLSDEKPLTCSTPSFAGVGCVGRMDRLGCQRWSRGHNREGEEFIRNIFHLVM
PLFSGEEKSRLCFSWLRHETAKVIWCLQTKNKKKLKSQGRNCKKLAKSLLKEPENCSSLC
LWRQYAHLEWLLGNTEDARKVFDTALSMVGARELKDAALCELSLLYAELEVELLSDLRGA
ATSRAVHVLTKLTESGPYGPYSGQVLAVHILKARKAYERVLQDCLDESCIPDPAPTDSFN
CLVSLVRCFMLFQYLTMGIDAAVQIYEQVFTKLKGSVSREGTGLEHSGSPRSLASALEAV
TLMYTSLLQFHVKVSVYPLTPLREALSEALKLYPANQALWRSYVQIQNKSHSASKTRRFF
DAITRSTKSLEPWLFAIEAEKMRKRLVETVQRVEGGEVHATIPESGLTNRIKALFEHAIQ
SDNGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYMDAVEYFTDEMQEIL
DLMTEKELRVRLPVEELELLLED
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcccagcctttgcgggtgttagtgaggccgccgacagcgggagctccagg
aaagaattagactggctgagcaacccaagcttctgtgttggaaccataataccaccgagc
cagcagctggaagaagccccaaaccttgttcctgaggggccaccactgaccaggagtcct
ttgaaatcagagccttcagatgaaagtgacactaacaaaaaactcaaacaaacaagcagg
aaaaagaagaaagagaaaaagaagaaaaggagacatcagcaccacaagaaaaccaagaga
aaacatgggcagtcgagtggcagcacatctgagccagatactgacgctgaaagggacaaa
tcttctagaagcaacagtaaaagggaatctgagaaaccaaatcaagaaaatcatgctgct
gcagatattggacatcggtgtgtttggctggaggacattcaggctgcgacgggagaaacc
ttccgaacagataagaaaccagatcctgcaaactgggagtataagtctctctaccggggg
gatatagcaagatacaagaggaaaggagactcctgcctgggcattaaccctaagaagcag
tgtatatcttgggaaggggctcccatggaaaagaagaattcacacaagcatgttgaacgc
tattttaccaagaagaacgtgggattgatgagcattgatggagctgctgttagcagtaaa
accgaacctccctcatctgaggcggcctcgtttataccagtgaaggactcggaggatgtg
gctccttccgtcaccacctggatgaaccctctggggatttacgaccattccaccacgcag
tggttacaaggacagggccctttggagcaagagacaaagctgccagactcacagccagac
agagagaatgctgttctcaaggccaaggtggaggaatttaacaggaagattcgggagaat
cctcaggacattgagctgtggatggcatttgtcgcttttcaggacgaggtcatgagaagg
ccaggcctgtatgcccttgacgaaggagagcaggagaagcgaaagcggtccctgaagctc
accctggagaagaagctggctatcctggagcgggccatcgagagcaacccaagcagcgtc
gacctgaaactcgccaagctgaagctctgcacggagttctgggagcccgccactctggtc
aaagagtggcagaagctgatattcttgcaccccaacaatacagccctttggcagaagtac
cttctattttgccagagtcaatttagcaccttctcggtatcaaaaattcacaatctttat
ggaaaatgcttgagtactttgtcttccgttaaggacggcagcatcttatctcatcccgtg
ttgcctggcactgaggaggccatgtttgctctctttcttcagcagtgccactttctgcgg
caggctggccactcggagaaggcagtctctttgttccaggccatgattgacttcaccttc
ttcaaacctgacagtgtgaaagatctgcctaccaaaggacaggtggaattctttgagccc
ttttgggacagcggcgagccccgggctggggagaagggggcccgaggctggagagcatgg
atgcaccagcaggagcggggcggctgggtggtcatcaacccagatgaggatgacgatgag
ccggaagaggatgaccaggaaataagagataagaccctgcccaggtggcagatctggctt
ggtgctgagcgttcccgagaccagaggcattggcaaccttggcgccctgataagaccaag
aagcaaaccgaggaagattgtgaggatccagagaggcaggtgttgtttgatgatattgga
cagtctctgatcagactctcaagcagagatctccagtttcagctggttgaagccttcctg
cagttcttgggtgtgccttctggctttgcgcccccagtctcctgcctttatctggccatg
gatgaaaacagcgtcttcgttcacagactttctgatgaaaagccattgacttgttctacc
ccttcctttgccggcgtgggctgtgttggccgcatggaccgcttgggctgtcagcgctgg
agcagggggcacaaccgagagggcgaggagtttatccgtaacatcttccacctggtgatg
cctttgttctcaggcgaggagaagtctcggctctgcttctcctggttacggcacgagacg
gcaaaggtcatttggtgtctgcaaactaaaaacaagaagaaattaaagtcacaaggaagg
aactgcaaaaaactagccaagagtctcctgaaggagccagaaaactgcagtagtctgtgc
ctctggaggcagtatgcacatctggagtggctgctgggcaatacagaggatgccaggaag
gtttttgatacggcactcagcatggtgggagccagggagctgaaggacgctgcgctctgt
gagctcagtcttctgtatgcggaactggaggtggagctgctgtcggacttgagaggggcc
gccacgtccagagctgtccatgtactaaccaaactgaccgagagcggtccctacgggccc
tactctgggcaggtcttggctgttcacattctgaaggcccggaaggcttacgagcgagtg
cttcaggactgcttggacgagagctgcatcccagacccagctcccaccgactcctttaac
tgcctggtcagcttggtcagatgctttatgctcttccagtacttgaccatgggcattgat
gctgctgtgcagatatacgagcaggtatttacgaaactgaagggctctgtgtcccgtgaa
ggcactggcctggagcacagcggcagcccccggagcctggccagcgctctggaagctgtc
acactgatgtacacgagtctgctccagttccacgtgaaagttagcgtttaccctctgacc
cctttgcgagaggcactctctgaggctttgaagttgtatccggccaaccaagctctttgg
aggtcatatgttcaaattcaaaacaagtcccacagtgccagcaagaccagaagattcttt
gatgcgatcaccaggtccaccaaatccttggagccttggttgtttgcaattgaagccgag
aaaatgaggaaaagactggtggaaactgttcagagggtagaaggtggagaagtacatgcc
acaatccctgagagcggcttaacaaaccgaatcaaagccctgtttgaacatgcgatccag
agtgacaacggcagccagtgccccttgctgtggagaatgtacttgaactttttggtttcc
ttaggaaataaagaaagaagcaaaggtgtgttctacaaagcacttcagaattgtccctgg
gcaaaggtgttatacatggatgctgtggagtacttcacagatgagatgcaggagatcctg
gacctgatgaccgagaaggagctccgggtgcgactgccagtggaggagctggagctcctg
cttgaagattag
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