Loxodonta africana (African savanna elephant): 100659642
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Entry
100659642 CDS
T04351
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100659642
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lav04990
]
100659642
Domain-containing proteins not elsewhere classified [BR:
lav04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
100659642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
TSP1_CCN
TSP1_spondin
PLAC
ADAMTS_CR_3
Motif
Other DBs
NCBI-GeneID:
100659642
NCBI-ProteinID:
XP_023408641
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MGYRFYVRQAEKVIDGTPCDLNGTAICVSGQCTSIGCDDYLGSDKVVDKCGVCGGDNTGC
QVVSGVFKHALTSLGYHRVVEIPQGATKINITEMYKSNNYLALRSRSGRSIINGNWAIDR
PGKYEGGGTMFTYKRPNEISSTAGESFLAEGPTNEILDVYMIHQQPNPGVHYEYVIMGTN
AINPQVPPHRRPGEPFNGQLAPEGRSQDEGEEKERSEEKEGVRGEAPEIDTAESARTFPV
RQPDRLSSHRPDSLVPPAPQSPRRSRDHNWKQLGTTECSTTCGKGSQYPVFRCVNRNTHK
EVPESYCDSSMKPTPEEEPCNIFPCPAFWDIGEWSECSKTCGLGMQHRQVLCRQVYANRS
LTVQPYRCQHLEKPETTSTCQLKICSEWQIRTDWTSCSVPCGVGQRTRDVKCVSNIGDVV
DDEECNMKLRPNDIENCDMGPCAKSWFLTDWSERCSAECGAGVRTRSVVCMTNHIGSLPL
EGCGNNRPAEATPCDNGPCAGKVEWFAGSWSQCSIECGSGTQQREVICVRKNVDTFEVLD
PYECSFLERPPSQQSCHLKPCGAKWFNTEWSMCSKSCQGGFRVREVRCLSDDMTLSNLCD
LQLKPEERESCNPQDCVPEVDENCKDKYYNCNVVVQARLCVYNYYKTACCASCTRVANRR
PGYLGSR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgggctaccgcttctatgtacggcaggctgagaaggtcattgatggcactccctgtgac
ctgaacggcacggccatctgtgtgtctgggcagtgcacgagtattggctgtgatgactac
ctgggctccgacaaagtcgtggacaagtgcggggtgtgtggaggcgataacaccggttgt
caggttgtgtctggcgtgtttaagcacgccctcaccagtctgggctaccaccgagtggtt
gagattcctcagggagccacaaaaatcaacatcacagagatgtacaagagcaacaactat
ttggccttgcgaagtcgctctggtcgatccatcatcaacgggaactgggcaattgaccgg
cctgggaaatacgagggcggagggacaatgttcacctacaagcgtccaaatgagatttcg
agcactgcaggagagtcctttttggcagaaggtcccactaatgagatcttggatgtctac
atgatacaccagcagcctaacccaggagtccactatgagtacgtcatcatggggaccaat
gccatcaacccacaggtgccacctcacaggagaccaggggaacccttcaatggtcagctg
gcgccagaaggtaggagccaggatgagggggaagagaaagagaggagcgaggagaaagaa
ggcgtgcgtggcgaggcacctgaaatagacaccgcggaatcagcccgaaccttcccagtc
aggcagccagacaggctttcttcccatcgaccagacagtttggtgccaccagcaccacag
tccccacggagaagccgggatcacaactggaagcagcttgggaccacagaatgctcgacg
acctgcgggaaaggatcgcagtaccctgtttttcgctgtgtgaacagaaacactcacaaa
gaggtccccgagagctactgtgactccagcatgaagccgacccccgaggaggagccctgc
aacatcttcccttgcccagccttctgggacatcggggaatggtccgagtgcagcaaaacc
tgtggtctgggcatgcagcatcgccaggtcctgtgccgccaagtgtacgccaaccgcagc
ctgacagtgcagccctaccgctgccagcacctggagaagcccgagaccaccagcacctgc
cagctcaagatctgcagcgagtggcagatccgcacggactggacctcgtgctcagtgccc
tgtggagtgggacagaggacccgagacgtgaagtgcgtgagcaacatcggggacgtggtg
gacgacgaggaatgtaacatgaagctccggcccaatgacattgagaattgtgacatgggg
ccctgtgcgaagagctggttcctcaccgactggagtgagaggtgctcagcagagtgcggt
gctggtgtgcgaacacgctcggtggtgtgcatgaccaaccacatcggcagcctgccccta
gagggctgtgggaacaaccgtccagcggaggccactccttgtgacaatgggccctgcgct
ggcaaggtggaatggttcgctggaagctggagtcagtgttccatcgagtgtggaagcgga
acccaacagagggaggtgatttgtgttaggaagaatgtggacacctttgaagtgctggat
ccctatgaatgttccttcttggagagaccccccagccagcaatcctgccatctcaagcct
tgtggggccaaatggtttaacacagaatggagcatgtgctccaagagctgccagggcggc
ttccgggtccgagaagtgcgatgtctctcagacgacatgaccctaagtaatctctgtgac
cttcagttgaaaccagaagagagagaatcttgtaaccctcaggactgtgtccctgaagtt
gatgaaaactgcaaggacaagtactacaactgcaacgtggtggtccaagcccgactctgc
gtctacaactactacaagaccgcctgctgcgcctcgtgcactcgcgtggccaacaggcgc
ccagggtacctggggagcagataa
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