Loxodonta africana (African savanna elephant): 100659774
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Entry
100659774 CDS
T04351
Symbol
LSM2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03018
RNA degradation
lav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100659774 (LSM2)
09123 Folding, sorting and degradation
03018 RNA degradation
100659774 (LSM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100659774 (LSM2)
03041 Spliceosome [BR:
lav03041
]
100659774 (LSM2)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100659774 (LSM2)
mRNA degradation factors
5'-3' decay
Lsm complex
100659774 (LSM2)
Spliceosome [BR:
lav03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100659774 (LSM2)
Complex C
U2 snRNP components
100659774 (LSM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
100659774
NCBI-ProteinID:
XP_003422283
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MFLGQRLRAFCGGCACTTPACPTRRFALHLPPGLRFAAPLFYSFFKSLVGKDVVVELKND
LSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLL
QDAARKEALQQKQ
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcggccaacgcctgcgcgctttctgcggcggctgcgcctgcacgaccccggct
tgtcccacgcgtaggttcgcgctgcacttgccgcccggcctccggttcgcggcaccactc
ttctattcctttttcaagtcccttgttggaaaggatgtggtcgtggaactaaaaaatgac
ctgagcatctgtggaacactccattctgtggatcagtatctcaacatcaaactaactgat
atcagcgtcacagaccctgagaaataccctcacatgttgtcagtgaagaactgcttcatc
cggggctcagtggtccgctatgtgcagttgccagcagatgaggttgacacacagttgctc
caggatgcagcaaggaaggaggccctgcagcagaaacagtga
DBGET
integrated database retrieval system
