Loxodonta africana (African savanna elephant): 100660082
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Entry
100660082 CDS
T04351
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03082
ATP-dependent chromatin remodeling
lav05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100660082 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100660082 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lav03036
]
100660082 (SS18)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100660082 (SS18)
GBAF(ncBAF) complex
100660082 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
100660082
NCBI-ProteinID:
XP_010585104
UniProt:
G3SXS7
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGLGGMNQSGPPPPPRSHNMSSDGIVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPSQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYAPQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcgttcgcagccccgaggcagcgaggcaagggggagatcacccccgctgct
attcagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcaaaat
aaaggaaagacctcagaatgttctcagtatcagcagatgttgcatacaaacttggtctac
cttgctacaatagcagattctaatcaaaatatgcagtctctcttaccagcgccacccaca
cagaatatgcctatgggtcttggaggaatgaatcagagcggccctcccccacctcctcgc
tctcacaacatgtcttcagatggaattgtaggtgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctatgcagggacctggaccc
aatcaactcaatatgacgaatagttccatgaacatgccttcaagtagccatggatccatg
ggaggttataaccattccgtgccatcgtcacagagcatgccagtacagaatcagatgacg
atgagtcaaggacagccaatgggaaactacggccccagaccaaatatgaatatgcagccc
agccaaggtccaatgatgcatcaacagcctccttctcaacaatataatatgccacaggga
ggtgggcaacattaccaaggacagcagccacctatgggaatgatgggtcaagttaatcaa
ggcaatcatatgatgggtcagagacagatccctccttatagaccacctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccagtacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaattcccaatatggccaacagcaagatgcttaccaaggaccacct
ccacagcagggatatgcaccccagcaacagcagtacccggggcagcagggctatccagga
cagcagcagggctacggtccttcacagggtggtccaggtcctcagtatcccaactaccca
cagggacaaggtcagcagtatggaggatatagaccaacacagcctggaccaccacagcca
ccccaacagaggccttatggatacgaccaaggacagtatggaaactaccagcagtga
DBGET
integrated database retrieval system
