Loxodonta africana (African savanna elephant): 100660174
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Entry
100660174 CDS
T04351
Symbol
TUBGCP6
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lav03036
]
100660174 (TUBGCP6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lav04812
]
100660174 (TUBGCP6)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
100660174 (TUBGCP6)
Cytoskeleton proteins [BR:
lav04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
100660174 (TUBGCP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
DUF4573
GCP5-Mod21_C
Anti-LPS-SCYG
Motif
Other DBs
NCBI-GeneID:
100660174
NCBI-ProteinID:
XP_010600910
LinkDB
All DBs
Position
Unknown
AA seq
1831 aa
AA seq
DB search
MASITQLFDDLCEAHLPAAKAHLGQYGLDRRRAKQSLKKVAYNMLFTNLFQDETHKLQPD
LPKLPVKNKILLLSFNLRVGGLGPEADRLEDLVEELEGATWCPLVEVLSVLDLLVQLAGS
GPPQVLPRKRDYFFNNKHVGRNGPYSGYDCYDLSVFEMDVQSMIAREEYLCHDMVQKTLQ
VMEAAPGTGLLTFGRFSSGDSCDKFERDTRTSLFGALVHSRTFDMDVRLDLPPVPDSADL
SGLAIKVPQSVDQSEDEGFQSASNLTPDSQSEPSMTPDLDLWEAVLTYEASKRRCWERVG
CPPGHREEPYLTEAGRDAFDRFCRLCEEGLQVVGGSLLPAPQRVLVRECELVKDTLNVLI
GVVSATFSLSQSAQAFVVKPGVYVSGTSPESMRSLLSEVAACGTYYVRLSRFSLQPVLDT
TCSKGLVFQAFTSGLRRYLQYYRACVLSTPATLSLLAIGFLFKKLGRQLRYLAELCGVGT
GLPGTAGGGPRTAFPTGVKLLSYLYQEALDNCSNEHYPVLLSLLKTSCEAHSLPACRFIH
DWVYSGLFRDIYGEFMIQVNHDYLGFRDKFYWTHGYMLISEEVEDCVPVFLRHIANDVYV
CGKTINLLKLCCPRHYLCWSDVPVPRISVIFSLEELKEIEKDCAVYVGRMERVARYSSVS
KEEKELRVEIAKQELIVHAREAASRVLSTLSDRQVSERAALDARKREQFQRLKEQFMRDQ
ERRLAARQEEADEDFSYARELREREKRLQALEEELERRTRQALVERYSRLSAEAACREQK
ALWGLQRRRLGEVRRCFLLADQKRQQELLKDVSEGACPQLLDEVPCAERLPGIGVALPQA
LSPDVEPPGGSQSHDSLPAEEHGVVPTPWPPGSSATGAEPFSAGTSVRDFLPTELGLEQP
AEPNMASVAGNAPLLREAPVSGMAPFPGEAPLLEQALCTISSDLPSLTPGEVPTLAGTQP
SQVQEYDFSTILRPAVAALVSPGSLQALEGDSGSKGPQLRWDTDTKLDARVPEVLAGQPH
LPLPRPAEEENSGPQDQPLRHVSEGRVSSVGHASQTAPSRPRWSVHGHVSDANIKIGENV
SDMAPLQPRWNIHGHTSDANVRVGENVSDVAPSRPQWSVHGHVSDANIRVGENVSDVAPS
RPRWSVHGHVSDANIRVGENVSDVAPSRPRWSIHGHVSDANIRVGENISDVAPSRPRWSV
HGHVSDANIRVGENVSDVVPSRPRWSVHGHVSDSNIRVGENVSDVAPSQPRWSVHGHMSD
ANIRVGENVSDVAPSRPRWNIRGHVSDARVRIGENISNVAPSQPQWSVHASQSHTVLGVL
LEEAEPEKSGPHLSPSGHVVQSDQGAQSTSLEHPPAETTPGPLGLSLAQVATFGSAEEGG
FQAELCTVARPGAPEEHGSEGSRSSGNSSTASPGQPSSPQAGEAREEWAYLEGLAAQYHL
EQYPDSYEAMSEPPAAHLLPHVLPRSFSFPADPQAQPGTDETAVQLSELLTLPVLLKHSI
SAPLTAHVSLVNKAAVDYFFVELHLETHLEALRHFVLMEDGEFAQSLSDLLFEKLGSGQM
PGELLSPLALGSVLSKALQYSLHGDSPLAANLSFALKFLPEVFSPNAPDVLSCLELRYKV
DWPLNIVITESCLSKYGRIFSFLLQLKLMMWTLKDICGHLKRSALVSRVAGSVQFRQLQL
FKHEMQHFVKVTQGYIASQILHVTWCEFRNKLATVSTLEEVQRAHAEYLNKAVFRGLLTE
KAAPVMNVIHSIFSLVLKFRSQLISQAWGPTAHPRGAEHPNFALMQQSYNTFKYYSHFLF
KVVTKLVNRGYQPHLEDFLLRINFNNYYQDA
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atggccagcatcacccagctgttcgatgacctgtgcgaggcccacctgccggccgcaaag
gctcacctggggcagtatggcctggaccggaggagggcaaagcagagcctcaagaaggtg
gcctacaatatgcttttcacaaatctctttcaagatgagactcataagctgcagcctgac
ctccctaaactcccggtgaagaacaagatcctcctgctatccttcaacttgagagtaggc
ggcctgggccctgaggctgatcgtttggaggaccttgtggaggagctcgaaggtgccact
tggtgtccgcttgtggaagtgttgtctgttttggacctcctagttcagcttgcagggagc
ggcccccctcaagtactgccccgaaaacgggactacttctttaacaacaagcatgtgggg
aggaatggtccatacagtggctacgactgctatgacttgagtgtgtttgagatggacgtt
cagtccatgattgccagagaggagtatttgtgtcacgatatggttcagaaaacactccag
gtgatggaggctgcgccaggcaccggcctgctcacctttgggcgcttctcatctggtgac
tcttgcgacaagtttgagagagacacccggacctccctcttcggtgcccttgtgcacagc
cgcacgttcgacatggatgtccggctggacctgccccccgtgccagacagtgcggacctg
tctggactcgccattaaagttcctcagagtgtggatcagtcggaagatgaagggttccag
tcggcgtctaatttgactcctgactcccagtctgaaccaagcatgaccccggacctggac
ctttgggaggctgtgctcacctacgaggccagcaagcggcggtgctgggagagagttggg
tgcccccctggccacagagaggagccctacctcaccgaggcgggaagagacgcctttgac
aggttctgcagactctgcgaggaggggctacaggtcgttggtggcagcctcctcccagcc
ccgcagcgcgtcctggtgagagagtgtgagcttgtgaaggacacgctgaacgttctcatt
ggggttgtatccgccacattctcactcagccagtcagcacaggccttcgtggtcaagccg
ggtgtgtacgtgtcagggacgtcccctgagagcatgcgtagtctcctgtcagaggtggcc
gcgtgcgggacctactatgtgcgcctgagccgcttctctctgcagccagtgctggacacc
acctgtagcaagggtcttgtgtttcaggccttcaccagcggcctgagacggtatctgcag
tactaccgggcctgtgtgctctctaccccggccaccctcagcctgctggccatcggcttt
ctcttcaagaagctgggccggcagctcaggtacctggccgagctgtgtggtgtcggcacc
gggctcccggggaccgccggtggagggcccaggactgcattcccaacgggcgtgaagctg
ctctcctacctgtaccaggaggccctggacaactgcagcaacgagcactacccggtcctg
ctgtccctgctcaagaccagctgtgaggctcactctctgcctgcctgcaggtttatccat
gactgggtgtacagcgggctctttcgggacatctacggcgagttcatgatccaggtgaat
cacgactaccttggcttcagagataagttttactggacccacggctacatgctgatttct
gaagaggtagaggactgcgtccccgtgttcttgaggcacattgccaatgacgtgtacgtc
tgcgggaagactatcaacctgttgaagctctgctgcccccggcattacctgtgttggtct
gatgtccctgtccctcggatctcggtgatcttctctctcgaggagctgaaggagattgag
aaggactgtgccgtgtacgtggggcggatggaaagggtggcacgctacagctcagtcagc
aaggaggagaaggaactacgtgtggaaatagcaaaacaggaactgattgtccacgcccga
gaggcagcatccagggttctgagcaccctgagtgaccggcaggtgtctgagcgagcggcc
ttggatgcccggaagcgagaacagtttcagaggctgaaggagcagtttatgcgagaccag
gagcgacgcctggcagccagacaggaagaggccgacgaagacttcagctacgcccgagag
ctccgagagagggagaagcggctgcaggccttggaagaggagctggagcggaggacgagg
caggcgctggtcgaacgctacagccggctgtcagctgaggccgcgtgccgggagcagaag
gcgctctgggggctgcagaggcgcaggctgggcgaggtgcgacgctgcttcctcctggca
gaccagaaacgccagcaggagctgctgaaggatgtgtctgagggggcgtgcccacagctg
ctggatgaggtcccgtgtgctgagcggttacctgggataggggtggcgcttccccaggcc
ctgtccccagatgtggagcccccaggtggaagccaaagccatgattccttacctgcggag
gagcacggggtggtcccaacaccctggcccccggggtcctccgccacaggggccgagcct
ttctctgctggcaccagcgtacgagacttcctgcccacggagctggggctggagcagcct
gcagagcccaacatggcctctgttgcggggaatgcccctctcttgcgtgaagcccctgtt
tcggggatggcccctttcccaggggaggcccctctgctggagcaggcgttgtgtaccatc
agctcagacctaccttccttgactccaggggaggtgcccacattggctggcacacagccc
tcccaggtgcaagagtatgattttagtaccatcctgaggccagctgtggctgccttggtc
tctccaggatccctccaggctctagagggcgactcaggcagcaagggaccacagctgcga
tgggacactgacacaaagctggatgcccgggtccctgaagttctggcgggtcagcctcac
ctgcccttgccaaggcctgctgaggaggagaacagtgggccccaagatcagcctcttagg
cacgtgtctgaaggcagggtttcatcagtgggtcatgcttctcaaacagctccctcccgg
ccacggtggagtgtccatggccacgtgtctgatgccaacatcaagattggggagaatgtc
tcagatatggctcccttacagccacggtggaacatccatggccacacgtctgatgccaat
gtcagggttggagagaatgtctcagatgtggccccctcccggccacagtggagtgtccat
ggccacgtgtctgatgccaacatcagggttggggagaatgtctcagacgtggccccctcc
cggccacggtggagtgtccatggccatgtgtcagatgccaacatcagggttggagagaat
gtctcagacgtggccccctcccggccacggtggagcatccacggccatgtgtcagatgcc
aacatcagggttggggaaaacatctcagatgtggccccctcccggccacggtggagtgtc
cacggccacgtgtcagatgccaacatcagggttggagagaatgtctcagatgtggtcccc
tcccggccacggtggagcgtccatggccacgtgtcagattccaacatcagggttggggaa
aacgtctcagacgtggccccctcccagccacggtggagtgtccatggccacatgtcagat
gcaaacatcagggttggggaaaatgtctcagacgtggccccctcccggccacggtggaac
atccgtggccatgtgtccgatgccagggtcaggattggggagaatatctcaaacgtggcc
ccctcccagccacagtggagtgttcacgcttcccagtcccatactgtgctgggagtgctc
ttggaggaagccgaacccgagaagtctgggcctcacctgagcccctctggccacgtggtc
cagtcagaccagggagcacagagcacctccctggagcatccgcctgcagagaccacacca
gggcccttgggcctctccctggctcaggtggccacctttggcagtgcagaggagggtggt
ttccaggctgagctctgtaccgtggctaggcctggagcccctgaggagcatggttctgag
ggctccaggagcagtggcaacagcagcaccgcctctccaggtcagccctcgagtccacag
gcaggtgaggccagggaggaatgggcctacctagaaggcctggcagcacagtaccatctg
gagcagtatcccgacagctacgaggccatgtcagagcctccagcagcccacctcctgccc
catgtgctgccccgctccttctccttccctgcggacccccaggcccagcccggcacagat
gagaccgcagtgcagctgagcgagctgctgaccctgccagtgctcctgaagcattccatc
tctgccccactgactgcccatgtctccctggtgaacaaggccgctgtggactacttcttc
gtggagctgcaccttgagacgcacctggaggcgctgcggcactttgtcctgatggaggat
ggcgagtttgcccagtccctcagcgacctgctctttgagaagctggggtcggggcagatg
cctggggaactcctcagcccactggccttggggtctgtgctgagcaaggccctgcagtac
agcctccatggggacagccccctcgctgctaacctctccttcgccctcaagttcctgcct
gaggtgttcagccccaacgcccccgacgtgctgagctgcctggagctcaggtacaaggtc
gactggcccctcaacattgtaatcactgagagctgcttgagcaagtacggccgcatcttc
tccttcctgctgcagctcaagctcatgatgtggacgcttaaggacatctgcggccacctc
aagcgctcggcactggtgagccgggtggcaggctccgtgcagttccggcagctgcagctg
ttcaagcacgagatgcaacactttgtgaaggtcacccagggctacatcgccagccaaatc
ctgcacgtcacctggtgtgagttcaggaacaagctggccactgtgagcaccctggaggag
gtccagcgggcccacgccgagtacctcaacaaggctgtcttccggggcctgctgacagag
aaggctgcgcccgtcatgaatgtcatccacagcatctttagccttgtcctcaagttccgc
agccagctcatctcccaggcctggggccccaccgcccacccccggggtgctgagcacccc
aactttgcccttatgcagcagtcatacaacaccttcaagtactattcccacttccttttc
aaagtggtgacaaagctggtgaaccgtggctaccagccacacctggaggacttcctgctg
cgtatcaacttcaacaactactaccaggacgcctga
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integrated database retrieval system
